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The map label for this gene is comM [H]

Identifier: 162147756

GI number: 162147756

Start: 2004829

End: 2006397

Strand: Reverse

Name: comM [H]

Synonym: GDI_1972

Alternate gene names: 162147756

Gene position: 2006397-2004829 (Counterclockwise)

Preceding gene: 162147759

Following gene: 162147755

Centisome position: 50.87

GC content: 70.55

Gene sequence:

>1569_bases
TTGCGGTTTCTCGGCTACAACAGGTGCATACGGGGTTTTTCCGACGATTGGGACTGCATGACCATCTCCTGCGTGCTGGG
GTTCGCCTTTTCCGGTATCGACGCGATCCCTGTCCGGGTCGAGGTGCAACTGGCGTCGGGGCTGCCGTCCTTCCTGATCG
TGGGCCTGGCCGACAAGGCGGTGGCCGAGGCGCGGGAACGGGTCCGCGCCGCGCTGTCCGCCATGGGGCTGACGCTGCCG
GCCAAGCGGATCGTCGTCAATCTGGCCCCCGCCAACATCGTCAAGGAAGGGTCGCATTTCGACCTGCCGATCGCGCTGGC
TCTGCTGACGGCGATGGGCGTGGTCCCGTCCGAGGAAAGCGGCCGCTTCGCGGCCATCGGCGAACTGTCCCTGGACGGAC
GGATCAATCCCGTGCCCGGCGTCCTGCCGGCGGCGCTGTGCGCGGTGGACCAGTCGCGCGGCCTGATCTGCGGCGCGCAA
CAGGGGCACGAGGCCCGCTGGGCCGGTGACGGCCTGGACATCCTCGCCCCCGACTCCCTGCTGGCGCTGGTGAACCACAT
GACCGGGGAACAGGTCCTGCCGCCGGTCGAACTTCCCGAGCGCCTGCCGGTCGAATCCATCGGAACGGGGCCGGACCTCG
CGGACGTGCGCGGCATGGAAACCGCCCGGCGCGCGCTGGAAATCGCGGCGGCGGGGGCGCATTCCCTGCTGATGACCGGG
CCACCCGGCGCCGGCAAGTCGATGCTGGCGGCCCGCCTCCCCTCGCTCCTGCCCGACCTGACCAGCACCGAGATCCTGGA
GATCAGCCGCATCCACAGTATTTCCGGGCACCTGCCGATGGGCCTGCCGGTCTTTCGTCCGCCCTTTCGCGACCCGCATC
ATTCGACCAGCCAGATCGCGCTGGTGGGCGGCGGCAACGGCAACCGCATCCGGCCCGGCGAGGTCAGCCTGGCCCATCGC
GGGGTGCTGTTCCTGGACGAACTGCCGGAATTTTCCCGCGCCGCGCTGGAGGCCCTGCGCCAGCCGATCGAAACGGGTAC
CATCACGGTGGCGCGGGCCTCGGCGCATGTCACCTACCCTGCCCGCTTCCAGCTCGTCGCGGCAATGAATCCCTGCCGGT
GCGGCTATCTGGGGGATGCGTCGCAGGAATGCCGCAAGGCGCCCCGCTGCGGCGAGGAATATCTGTCGCGCATTTCCGGC
CCCATGCTGGACCGGATGGACATGGCCGTGCATGTCGAACCGGTCTCGCCGGCCGAATTGGCCGGCCTGCCGACCGGCGA
AAACAGTGCCGCCGTCGCCGCCCGCGTCGCCGTCGCCCGCACGCGGCAGACCGCGCGCCAGGACGGGCTGACCAACGCCG
AAGCCCCGCCTGACCTGTTCCCCACCAGCACGGCGGCGCGCGATTATGCGGTGCGCGCCGCCGACCGGCTGCGCCTGTCG
GCGCGCGGATTCACGCGCCTGCTACGCGTCGCACGGACGATCGCCGACCTGGCGGGAGATGAGGAGACCGGCCAGCCCCA
CGTCGCCGAGGCCGTCAGCTATCGCCTGCGCCGGCCAGACCGGCGTTAG

Upstream 100 bases:

>100_bases
CCACACAGGAGTATCGTATAATATATATTATGCCAACAAGACTGCGCGTGGCAGTGTGCGGGATGGAGGAGGACGATCAT
CGCGCCGCCGGGGTTTCGCG

Downstream 100 bases:

>100_bases
CGTCTTATGAAAAGACGCCATTTTCTATGGGGCGGTTCGACCTTTCTCGCCTCGCCGTCCCTTGCCCGGCCTGCCCCGCC
TTCTGTGATCTCGGACTATG

Product: Mg chelatase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 522; Mature: 522

Protein sequence:

>522_residues
MRFLGYNRCIRGFSDDWDCMTISCVLGFAFSGIDAIPVRVEVQLASGLPSFLIVGLADKAVAEARERVRAALSAMGLTLP
AKRIVVNLAPANIVKEGSHFDLPIALALLTAMGVVPSEESGRFAAIGELSLDGRINPVPGVLPAALCAVDQSRGLICGAQ
QGHEARWAGDGLDILAPDSLLALVNHMTGEQVLPPVELPERLPVESIGTGPDLADVRGMETARRALEIAAAGAHSLLMTG
PPGAGKSMLAARLPSLLPDLTSTEILEISRIHSISGHLPMGLPVFRPPFRDPHHSTSQIALVGGGNGNRIRPGEVSLAHR
GVLFLDELPEFSRAALEALRQPIETGTITVARASAHVTYPARFQLVAAMNPCRCGYLGDASQECRKAPRCGEEYLSRISG
PMLDRMDMAVHVEPVSPAELAGLPTGENSAAVAARVAVARTRQTARQDGLTNAEAPPDLFPTSTAARDYAVRAADRLRLS
ARGFTRLLRVARTIADLAGDEETGQPHVAEAVSYRLRRPDRR

Sequences:

>Translated_522_residues
MRFLGYNRCIRGFSDDWDCMTISCVLGFAFSGIDAIPVRVEVQLASGLPSFLIVGLADKAVAEARERVRAALSAMGLTLP
AKRIVVNLAPANIVKEGSHFDLPIALALLTAMGVVPSEESGRFAAIGELSLDGRINPVPGVLPAALCAVDQSRGLICGAQ
QGHEARWAGDGLDILAPDSLLALVNHMTGEQVLPPVELPERLPVESIGTGPDLADVRGMETARRALEIAAAGAHSLLMTG
PPGAGKSMLAARLPSLLPDLTSTEILEISRIHSISGHLPMGLPVFRPPFRDPHHSTSQIALVGGGNGNRIRPGEVSLAHR
GVLFLDELPEFSRAALEALRQPIETGTITVARASAHVTYPARFQLVAAMNPCRCGYLGDASQECRKAPRCGEEYLSRISG
PMLDRMDMAVHVEPVSPAELAGLPTGENSAAVAARVAVARTRQTARQDGLTNAEAPPDLFPTSTAARDYAVRAADRLRLS
ARGFTRLLRVARTIADLAGDEETGQPHVAEAVSYRLRRPDRR
>Mature_522_residues
MRFLGYNRCIRGFSDDWDCMTISCVLGFAFSGIDAIPVRVEVQLASGLPSFLIVGLADKAVAEARERVRAALSAMGLTLP
AKRIVVNLAPANIVKEGSHFDLPIALALLTAMGVVPSEESGRFAAIGELSLDGRINPVPGVLPAALCAVDQSRGLICGAQ
QGHEARWAGDGLDILAPDSLLALVNHMTGEQVLPPVELPERLPVESIGTGPDLADVRGMETARRALEIAAAGAHSLLMTG
PPGAGKSMLAARLPSLLPDLTSTEILEISRIHSISGHLPMGLPVFRPPFRDPHHSTSQIALVGGGNGNRIRPGEVSLAHR
GVLFLDELPEFSRAALEALRQPIETGTITVARASAHVTYPARFQLVAAMNPCRCGYLGDASQECRKAPRCGEEYLSRISG
PMLDRMDMAVHVEPVSPAELAGLPTGENSAAVAARVAVARTRQTARQDGLTNAEAPPDLFPTSTAARDYAVRAADRLRLS
ARGFTRLLRVARTIADLAGDEETGQPHVAEAVSYRLRRPDRR

Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=502, Percent_Identity=42.8286852589641, Blast_Score=349, Evalue=3e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001208
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 55523; Mature: 55523

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS50051 MCM_2 ; PS00063 ALDOKETO_REDUCTASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLGYNRCIRGFSDDWDCMTISCVLGFAFSGIDAIPVRVEVQLASGLPSFLIVGLADKA
CCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHEEEHHHHHH
VAEARERVRAALSAMGLTLPAKRIVVNLAPANIVKEGSHFDLPIALALLTAMGVVPSEES
HHHHHHHHHHHHHHHCCCCCCHHEEEEECCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCC
GRFAAIGELSLDGRINPVPGVLPAALCAVDQSRGLICGAQQGHEARWAGDGLDILAPDSL
CCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCEECCCCCCEECCHHH
LALVNHMTGEQVLPPVELPERLPVESIGTGPDLADVRGMETARRALEIAAAGAHSLLMTG
HHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHCCHHHHHHHHHHHHCCCCEEEEEC
PPGAGKSMLAARLPSLLPDLTSTEILEISRIHSISGHLPMGLPVFRPPFRDPHHSTSQIA
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEE
LVGGGNGNRIRPGEVSLAHRGVLFLDELPEFSRAALEALRQPIETGTITVARASAHVTYP
EEECCCCCCCCCCCEEHHHCCEEEEHHCCHHHHHHHHHHHCCCCCCCEEEEECCEEEECC
ARFQLVAAMNPCRCGYLGDASQECRKAPRCGEEYLSRISGPMLDRMDMAVHVEPVSPAEL
HHEEEEEECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCHHHCCCCEEEECCCCCHHH
AGLPTGENSAAVAARVAVARTRQTARQDGLTNAEAPPDLFPTSTAARDYAVRAADRLRLS
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
ARGFTRLLRVARTIADLAGDEETGQPHVAEAVSYRLRRPDRR
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRFLGYNRCIRGFSDDWDCMTISCVLGFAFSGIDAIPVRVEVQLASGLPSFLIVGLADKA
CCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHEEEHHHHHH
VAEARERVRAALSAMGLTLPAKRIVVNLAPANIVKEGSHFDLPIALALLTAMGVVPSEES
HHHHHHHHHHHHHHHCCCCCCHHEEEEECCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCC
GRFAAIGELSLDGRINPVPGVLPAALCAVDQSRGLICGAQQGHEARWAGDGLDILAPDSL
CCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCEECCCCCCEECCHHH
LALVNHMTGEQVLPPVELPERLPVESIGTGPDLADVRGMETARRALEIAAAGAHSLLMTG
HHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHCCHHHHHHHHHHHHCCCCEEEEEC
PPGAGKSMLAARLPSLLPDLTSTEILEISRIHSISGHLPMGLPVFRPPFRDPHHSTSQIA
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEE
LVGGGNGNRIRPGEVSLAHRGVLFLDELPEFSRAALEALRQPIETGTITVARASAHVTYP
EEECCCCCCCCCCCEEHHHCCEEEEHHCCHHHHHHHHHHHCCCCCCCEEEEECCEEEECC
ARFQLVAAMNPCRCGYLGDASQECRKAPRCGEEYLSRISGPMLDRMDMAVHVEPVSPAEL
HHEEEEEECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCHHHCCCCEEEECCCCCHHH
AGLPTGENSAAVAARVAVARTRQTARQDGLTNAEAPPDLFPTSTAARDYAVRAADRLRLS
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
ARGFTRLLRVARTIADLAGDEETGQPHVAEAVSYRLRRPDRR
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 9457884 [H]