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The map label for this gene is ydiK [H]

Identifier: 162147751

GI number: 162147751

Start: 2000267

End: 2001343

Strand: Reverse

Name: ydiK [H]

Synonym: GDI_1967

Alternate gene names: 162147751

Gene position: 2001343-2000267 (Counterclockwise)

Preceding gene: 162147754

Following gene: 162147750

Centisome position: 50.74

GC content: 67.32

Gene sequence:

>1077_bases
ATGGCCGAACGCATCATGATGGGGCTTTTGCTGGGCGGGGTGGCCTTCGGCTGTGGTGCCATCCTCTATCCCTTCATGTC
CGCGCTGCTGTGGGCGGCGATCCTGACCTTCGCCACATGGCCGCTCTTCATCCGCCTGCGCCGGCGCACCGGCCCGGTGA
CCGCCGCCATCGGCATGACCGTCCTGTCCGCGCTGGTCGTGGCCCTGCCCCTGGCGGTCGTGGTCAGCACCAGCATCGCC
GACCTGCCCGGCACGTTCGAAGGCCTGGCCGAAACGCTGGCGCGGCTGATCCACCTGCCCGCCCCGCCGCCCTGGCTGGC
GCGGATTCCCCATTTCGGTCCCGACCTGGCAAAGATCTGGACGCAATGGGCCACCGACCTGGGCCATGCGGAACGGATGC
TGCTGCCCTATACCGGCAGCATCGCGCAGTCGATGCTGGCCGGGCTGATGCAGGTGGCCAGCGGACTGGTGCATCTGGGC
ATGGCGCTGTTCATCGCCTTCTTCTTCTGGCTGGGGGGGGATTCGCTGGGCGGCACGTTCTCGGCGGTGATCCGGCGTAT
CGCCGGGTCCTATGCCGACCGGATCCTCAGCATCATCGGCCGCACCATCCGGGGCACGGTGTACGGCATCCTGGGCACCG
CGATCGTGCAGGGCGTGCTGACCGGCCTGGGGTTCGCGCTGACCGGCCTGCCCGAACCGGTATTGTTCGGCCTGATCACC
GCCTGCGTGGCCGTCCTGCCGATCGGCGCGCCCCTGATATGGATTCCGGGGGCGCTGGCGCTGATCCTGACGCACCATCC
CGGCTGGGGGATCTTCCTGGTCGTGTACGGGGTCCTGATCATATCGGGCGCCGATCACATCATCCGGCCGATGTTCATTT
CCCGGGGCGCGCAACTGCCCTACCTGCTGACGGTTCTGGGGGTTTTGGGCGGGGTATGGACCTTCGGGGGGCTGGGGATC
TTCCTGGGGCCGGTGCTGCTGGGCGTGGGCTATACGCTGACGGCGGAATTCGCGGCCAACGGATCGGGCCATACGGGGAA
TGCCACCCCGATACAGGAGAATTTCATAGAACCATGA

Upstream 100 bases:

>100_bases
TGGCGCCCGCTCCCGGGTAGGCCTTTACCGTCAGGGCGCTCTGCCACATCATCGCACGATGCCGGATGCTCTCCGGCGCC
GCGAGCTATGGCGGGAGCGT

Downstream 100 bases:

>100_bases
GCATCGTCCGCCCCTATCCCCCCTCGGCGCCGCACCTGCGGCCCGGGCAGCGGCCGCGACCGGCGCACCTGCCGGCGAAT
GCCGGCGGTTCGGAACGCAA

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MAERIMMGLLLGGVAFGCGAILYPFMSALLWAAILTFATWPLFIRLRRRTGPVTAAIGMTVLSALVVALPLAVVVSTSIA
DLPGTFEGLAETLARLIHLPAPPPWLARIPHFGPDLAKIWTQWATDLGHAERMLLPYTGSIAQSMLAGLMQVASGLVHLG
MALFIAFFFWLGGDSLGGTFSAVIRRIAGSYADRILSIIGRTIRGTVYGILGTAIVQGVLTGLGFALTGLPEPVLFGLIT
ACVAVLPIGAPLIWIPGALALILTHHPGWGIFLVVYGVLIISGADHIIRPMFISRGAQLPYLLTVLGVLGGVWTFGGLGI
FLGPVLLGVGYTLTAEFAANGSGHTGNATPIQENFIEP

Sequences:

>Translated_358_residues
MAERIMMGLLLGGVAFGCGAILYPFMSALLWAAILTFATWPLFIRLRRRTGPVTAAIGMTVLSALVVALPLAVVVSTSIA
DLPGTFEGLAETLARLIHLPAPPPWLARIPHFGPDLAKIWTQWATDLGHAERMLLPYTGSIAQSMLAGLMQVASGLVHLG
MALFIAFFFWLGGDSLGGTFSAVIRRIAGSYADRILSIIGRTIRGTVYGILGTAIVQGVLTGLGFALTGLPEPVLFGLIT
ACVAVLPIGAPLIWIPGALALILTHHPGWGIFLVVYGVLIISGADHIIRPMFISRGAQLPYLLTVLGVLGGVWTFGGLGI
FLGPVLLGVGYTLTAEFAANGSGHTGNATPIQENFIEP
>Mature_357_residues
AERIMMGLLLGGVAFGCGAILYPFMSALLWAAILTFATWPLFIRLRRRTGPVTAAIGMTVLSALVVALPLAVVVSTSIAD
LPGTFEGLAETLARLIHLPAPPPWLARIPHFGPDLAKIWTQWATDLGHAERMLLPYTGSIAQSMLAGLMQVASGLVHLGM
ALFIAFFFWLGGDSLGGTFSAVIRRIAGSYADRILSIIGRTIRGTVYGILGTAIVQGVLTGLGFALTGLPEPVLFGLITA
CVAVLPIGAPLIWIPGALALILTHHPGWGIFLVVYGVLIISGADHIIRPMFISRGAQLPYLLTVLGVLGGVWTFGGLGIF
LGPVLLGVGYTLTAEFAANGSGHTGNATPIQENFIEP

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=351, Percent_Identity=30.7692307692308, Blast_Score=125, Evalue=6e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 37623; Mature: 37492

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERIMMGLLLGGVAFGCGAILYPFMSALLWAAILTFATWPLFIRLRRRTGPVTAAIGMT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VLSALVVALPLAVVVSTSIADLPGTFEGLAETLARLIHLPAPPPWLARIPHFGPDLAKIW
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHH
TQWATDLGHAERMLLPYTGSIAQSMLAGLMQVASGLVHLGMALFIAFFFWLGGDSLGGTF
HHHHHHHCCHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
SAVIRRIAGSYADRILSIIGRTIRGTVYGILGTAIVQGVLTGLGFALTGLPEPVLFGLIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ACVAVLPIGAPLIWIPGALALILTHHPGWGIFLVVYGVLIISGADHIIRPMFISRGAQLP
HHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCH
YLLTVLGVLGGVWTFGGLGIFLGPVLLGVGYTLTAEFAANGSGHTGNATPIQENFIEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHCCCCCCCCCCCCCHHCCCCC
>Mature Secondary Structure 
AERIMMGLLLGGVAFGCGAILYPFMSALLWAAILTFATWPLFIRLRRRTGPVTAAIGMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VLSALVVALPLAVVVSTSIADLPGTFEGLAETLARLIHLPAPPPWLARIPHFGPDLAKIW
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHH
TQWATDLGHAERMLLPYTGSIAQSMLAGLMQVASGLVHLGMALFIAFFFWLGGDSLGGTF
HHHHHHHCCHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
SAVIRRIAGSYADRILSIIGRTIRGTVYGILGTAIVQGVLTGLGFALTGLPEPVLFGLIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ACVAVLPIGAPLIWIPGALALILTHHPGWGIFLVVYGVLIISGADHIIRPMFISRGAQLP
HHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCH
YLLTVLGVLGGVWTFGGLGIFLGPVLLGVGYTLTAEFAANGSGHTGNATPIQENFIEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHCCCCCCCCCCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]