| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is pyrG
Identifier: 162147714
GI number: 162147714
Start: 1963563
End: 1965194
Strand: Reverse
Name: pyrG
Synonym: GDI_1930
Alternate gene names: 162147714
Gene position: 1965194-1963563 (Counterclockwise)
Preceding gene: 162147715
Following gene: 162147713
Centisome position: 49.83
GC content: 64.46
Gene sequence:
>1632_bases ATGACGCGGTTTGTATTCATCACTGGCGGCGTGGTCTCCTCACTCGGTAAAGGCATTGCCTCGGCAGCCCTCGCGGCCCT GCTGCAGGCGCGCGGATACCGGGTCCGGCTACGCAAGCTCGATCCTTATCTCAACGTCGATCCGGGCACCATGAGCCCGT ATCAACATGGCGAAGTCTTCGTAACCGACGATGGCGCGGAGACCGATCTGGACCTTGGACATTATGAACGCTTCACCGGC GTCCATGCGACCAGGGCCGACAACGCCACAACCGGCCAGATCTATTCCGACGTGATCGCCCGCGAACGGCGCGGCGATTA CCTGGGCGCGACCGTTCAGGTCATCCCCCACATCACGGACGCCATCAAGGAAGCCGTGGTCGCGGGGACCGAGGACCTGG ATTTCGTGCTGGTGGAAATCGGCGGCACCGTGGGCGACATCGAAAGCCTGCCGTTCCTCGAGGCCATTCGCCAGTTGCGC AACGACCTGGGCGCCGGGCAGACGATGTTCGTCCACCTGACCCTGCTGCCGTGGATTCCCTCGGCCGGCGAACTGAAGAC CAAGCCGACGCAGCATTCCGTCAAGGAACTGCAGAATGTCGGTATCCAGGCCCAGATGCTGCTGTGCCGGTCCGACCGGC CGATTCCCGACACCGAACGGCGCAAGATCGCCAATTTCTGCAATGTGCGGCCCGAGGCCGTGATCGCGGCGCTGGACGTC GACACCATCTATGCCTGCCCGGTCTCGTACCACGCCGAAGGCATGGATACCGAGGTCCTGCGCCATTTCGGCCTGCCCCA TGACCAGGAACCCGACCTGTCGGCATGGAACCGGGTGCTGGACGCGATGCGCCACCCCGAGGGCGAGGTGCGGATCGCCG TGGTGGGCAAATACACGGCCCTGCTGGATGCCTATAAATCGCTGATCGAGGCGCTGCAGCATGGCGGCATCGCCAACCGG GTCCGCGTCAAGCTGGACTGGGTCGAGGCCGAGATCTTCGAGAAGTCGGAAACGGCGATCGAGGCGCTGCGCGACGCGCA CGCGATCCTGGTTCCCGGCGGTTTCGGCGAACGCGGGTCCGAAGGCAAGATCCAGGCCGTACGCTTCGCACGGGAACACA ACATCCCGTTCCTGGGCATCTGTTTCGGGATGCAGATGGCTGTCATCGAATGCGCCCGCAACCTGGCCGGCCTGCCCGAT GCGTCTTCGACCGAATTCGGCCCGACGGAGGAACCCCTGGTCGGCCTGATGACGGAATGGGCGCGGGGCAACGAATTGCT GCGCCGGCGCGAGGGCGGCGAGATGGGCGGGACGATGCGCCTGGGCGCCTATGCCGCCAAGCTGGCCGAAGGCTCCCGCG TGGCTGAAATCTACGGCAAGACCGAGATCCGCGAACGCCACCGCCACCGCTACGAGGTGAACGTGCATTACCGCGAGGTG CTGGAGAAGGCCGGATTGCAGTTCTCGGGCATGTCGCCGGACGACATCCTGCCGGAAGTGGTGGAGTATCCGAACCATCC CTGGTTCGTCGCGGTGCAGTACCATCCCGAACTGCTGTCCAAGCCGTTCGATCCGCATCCGCTTTTCTCGGGCTTCGTCG GCGCGGCCGTGAAGAAGATGCGGCTGGTATGA
Upstream 100 bases:
>100_bases CCCCGTCGCATGGCGGGGATGGTTTTTTATCGCCCCGATCGGACGGTCCGTCCGGTATGGACTTTTCACGGCGGGGCGAA ACAGTGTAGGGAGGCCATCC
Downstream 100 bases:
>100_bases CCCATCCGAAATCCGTCTCGCTCGGCAGCCTGACCGTCGGCAACGATCGTCCCTTCGTCCTGATCGCCGGGCCGTGCCAG ATCGAATCCGAAGCCCATGC
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase
Number of amino acids: Translated: 543; Mature: 542
Protein sequence:
>543_residues MTRFVFITGGVVSSLGKGIASAALAALLQARGYRVRLRKLDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTG VHATRADNATTGQIYSDVIARERRGDYLGATVQVIPHITDAIKEAVVAGTEDLDFVLVEIGGTVGDIESLPFLEAIRQLR NDLGAGQTMFVHLTLLPWIPSAGELKTKPTQHSVKELQNVGIQAQMLLCRSDRPIPDTERRKIANFCNVRPEAVIAALDV DTIYACPVSYHAEGMDTEVLRHFGLPHDQEPDLSAWNRVLDAMRHPEGEVRIAVVGKYTALLDAYKSLIEALQHGGIANR VRVKLDWVEAEIFEKSETAIEALRDAHAILVPGGFGERGSEGKIQAVRFAREHNIPFLGICFGMQMAVIECARNLAGLPD ASSTEFGPTEEPLVGLMTEWARGNELLRRREGGEMGGTMRLGAYAAKLAEGSRVAEIYGKTEIRERHRHRYEVNVHYREV LEKAGLQFSGMSPDDILPEVVEYPNHPWFVAVQYHPELLSKPFDPHPLFSGFVGAAVKKMRLV
Sequences:
>Translated_543_residues MTRFVFITGGVVSSLGKGIASAALAALLQARGYRVRLRKLDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTG VHATRADNATTGQIYSDVIARERRGDYLGATVQVIPHITDAIKEAVVAGTEDLDFVLVEIGGTVGDIESLPFLEAIRQLR NDLGAGQTMFVHLTLLPWIPSAGELKTKPTQHSVKELQNVGIQAQMLLCRSDRPIPDTERRKIANFCNVRPEAVIAALDV DTIYACPVSYHAEGMDTEVLRHFGLPHDQEPDLSAWNRVLDAMRHPEGEVRIAVVGKYTALLDAYKSLIEALQHGGIANR VRVKLDWVEAEIFEKSETAIEALRDAHAILVPGGFGERGSEGKIQAVRFAREHNIPFLGICFGMQMAVIECARNLAGLPD ASSTEFGPTEEPLVGLMTEWARGNELLRRREGGEMGGTMRLGAYAAKLAEGSRVAEIYGKTEIRERHRHRYEVNVHYREV LEKAGLQFSGMSPDDILPEVVEYPNHPWFVAVQYHPELLSKPFDPHPLFSGFVGAAVKKMRLV >Mature_542_residues TRFVFITGGVVSSLGKGIASAALAALLQARGYRVRLRKLDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTGV HATRADNATTGQIYSDVIARERRGDYLGATVQVIPHITDAIKEAVVAGTEDLDFVLVEIGGTVGDIESLPFLEAIRQLRN DLGAGQTMFVHLTLLPWIPSAGELKTKPTQHSVKELQNVGIQAQMLLCRSDRPIPDTERRKIANFCNVRPEAVIAALDVD TIYACPVSYHAEGMDTEVLRHFGLPHDQEPDLSAWNRVLDAMRHPEGEVRIAVVGKYTALLDAYKSLIEALQHGGIANRV RVKLDWVEAEIFEKSETAIEALRDAHAILVPGGFGERGSEGKIQAVRFAREHNIPFLGICFGMQMAVIECARNLAGLPDA SSTEFGPTEEPLVGLMTEWARGNELLRRREGGEMGGTMRLGAYAAKLAEGSRVAEIYGKTEIRERHRHRYEVNVHYREVL EKAGLQFSGMSPDDILPEVVEYPNHPWFVAVQYHPELLSKPFDPHPLFSGFVGAAVKKMRLV
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Homo sapiens, GI148491070, Length=560, Percent_Identity=43.3928571428571, Blast_Score=466, Evalue=1e-131, Organism=Homo sapiens, GI28559085, Length=561, Percent_Identity=42.602495543672, Blast_Score=442, Evalue=1e-124, Organism=Homo sapiens, GI28559083, Length=561, Percent_Identity=42.602495543672, Blast_Score=442, Evalue=1e-124, Organism=Homo sapiens, GI221316689, Length=561, Percent_Identity=42.602495543672, Blast_Score=442, Evalue=1e-124, Organism=Escherichia coli, GI1789142, Length=537, Percent_Identity=58.4729981378026, Blast_Score=606, Evalue=1e-174, Organism=Caenorhabditis elegans, GI25148299, Length=609, Percent_Identity=36.2889983579639, Blast_Score=390, Evalue=1e-109, Organism=Saccharomyces cerevisiae, GI6319432, Length=568, Percent_Identity=41.0211267605634, Blast_Score=421, Evalue=1e-118, Organism=Saccharomyces cerevisiae, GI6322563, Length=570, Percent_Identity=40.8771929824561, Blast_Score=415, Evalue=1e-117, Organism=Drosophila melanogaster, GI24664469, Length=560, Percent_Identity=44.1071428571429, Blast_Score=463, Evalue=1e-130, Organism=Drosophila melanogaster, GI21357815, Length=506, Percent_Identity=43.8735177865613, Blast_Score=401, Evalue=1e-112,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PYRG_GLUDA (A9HJ81)
Other databases:
- EMBL: CP001189 - EMBL: AM889285 - RefSeq: YP_001602175.1 - RefSeq: YP_002274567.1 - ProteinModelPortal: A9HJ81 - SMR: A9HJ81 - GeneID: 5790184 - GeneID: 6973544 - GenomeReviews: AM889285_GR - GenomeReviews: CP001189_GR - KEGG: gdj:Gdia_0152 - HOGENOM: HBG597806 - OMA: TEWLRGN - ProtClustDB: PRK05380 - HAMAP: MF_01227 - InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 - TIGRFAMs: TIGR00337
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase
EC number: =6.3.4.2
Molecular weight: Translated: 60020; Mature: 59889
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 381-381 ACT_SITE 515-515 ACT_SITE 517-517
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRFVFITGGVVSSLGKGIASAALAALLQARGYRVRLRKLDPYLNVDPGTMSPYQHGEVF CCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFTGVHATRADNATTGQIYSDVIARERRGDYLGATVQVIPHITD EECCCCCCCCCCHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AIKEAVVAGTEDLDFVLVEIGGTVGDIESLPFLEAIRQLRNDLGAGQTMFVHLTLLPWIP HHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCC SAGELKTKPTQHSVKELQNVGIQAQMLLCRSDRPIPDTERRKIANFCNVRPEAVIAALDV CCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHEEEEECC DTIYACPVSYHAEGMDTEVLRHFGLPHDQEPDLSAWNRVLDAMRHPEGEVRIAVVGKYTA CEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHHH LLDAYKSLIEALQHGGIANRVRVKLDWVEAEIFEKSETAIEALRDAHAILVPGGFGERGS HHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC EGKIQAVRFAREHNIPFLGICFGMQMAVIECARNLAGLPDASSTEFGPTEEPLVGLMTEW CCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH ARGNELLRRREGGEMGGTMRLGAYAAKLAEGSRVAEIYGKTEIRERHRHRYEVNVHYREV HHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCHHHHHHCHHHHHHHHCCEEEEEEHHHHH LEKAGLQFSGMSPDDILPEVVEYPNHPWFVAVQYHPELLSKPFDPHPLFSGFVGAAVKKM HHHCCCEECCCCCHHHHHHHHHCCCCCEEEEEEECHHHHCCCCCCCHHHHHHHHHHHHHH RLV CCC >Mature Secondary Structure TRFVFITGGVVSSLGKGIASAALAALLQARGYRVRLRKLDPYLNVDPGTMSPYQHGEVF CEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFTGVHATRADNATTGQIYSDVIARERRGDYLGATVQVIPHITD EECCCCCCCCCCHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AIKEAVVAGTEDLDFVLVEIGGTVGDIESLPFLEAIRQLRNDLGAGQTMFVHLTLLPWIP HHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCC SAGELKTKPTQHSVKELQNVGIQAQMLLCRSDRPIPDTERRKIANFCNVRPEAVIAALDV CCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHEEEEECC DTIYACPVSYHAEGMDTEVLRHFGLPHDQEPDLSAWNRVLDAMRHPEGEVRIAVVGKYTA CEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHHH LLDAYKSLIEALQHGGIANRVRVKLDWVEAEIFEKSETAIEALRDAHAILVPGGFGERGS HHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC EGKIQAVRFAREHNIPFLGICFGMQMAVIECARNLAGLPDASSTEFGPTEEPLVGLMTEW CCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH ARGNELLRRREGGEMGGTMRLGAYAAKLAEGSRVAEIYGKTEIRERHRHRYEVNVHYREV HHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCHHHHHHCHHHHHHHHCCEEEEEEHHHHH LEKAGLQFSGMSPDDILPEVVEYPNHPWFVAVQYHPELLSKPFDPHPLFSGFVGAAVKKM HHHCCCEECCCCCHHHHHHHHHCCCCCEEEEEEECHHHHCCCCCCCHHHHHHHHHHHHHH RLV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA