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The map label for this gene is cycA [H]

Identifier: 162147592

GI number: 162147592

Start: 1841634

End: 1842095

Strand: Direct

Name: cycA [H]

Synonym: GDI_1808

Alternate gene names: 162147592

Gene position: 1841634-1842095 (Clockwise)

Preceding gene: 162147591

Following gene: 162147593

Centisome position: 46.69

GC content: 68.83

Gene sequence:

>462_bases
ATGAAGAAAATCCTTACCCTGGCCGCCACTCTGTCCCTGGCCGGGGCGACGACCGCTTTTGCCGCGCCGGATGGCCAGGC
GCTGTACGGGGCCAATTGCGGCATCTGCCACCAGGGTGGCGGCGTCGGCGCGCCGGGCCAGTTTCCGCCCCTGGCGAACC
GGATCGACAAGATCGCCTCGACCCCCGAAGGCAAGAAATACGTGACCCAGGTGCTGGTGAACGGCCTGGCCGGCTCGATC
CAGGCGGGGGGCGCGACCTATGTCGGCTTCATGCCCAGCTTCAAGAGCCTGCCCGACGACCAGATCGCGGCCATCCTGAC
CTATCTGTCGTCGCTGGGTTCGACCAAGCCCGCCCCGGTCTTCGCGGCGGCCGATCTGGCGGCGGCGCGTGCGGCGCCGA
TGTCGTCCTCGGCCGTGGCCGCGGCCCGAAAGACGCTGAATGCGGCGCATCCCCTTCCGTAA

Upstream 100 bases:

>100_bases
CGACCTATCGCCCGCAGGCCAATAACGACATCATCTGGTGTTTCGGGACCGGCTCGCTTCTCTATAACTGCTCGACAGCC
GCAATCGTAGGAACCGCTGA

Downstream 100 bases:

>100_bases
GTCGGTCTGGCCGGTCATCGCGGTTCTTGCGGTGGCCGGTCTTCTTCCGCCGGGGCCTGCAGCCCGGGCGCTGGACCGGA
CCCGCACGACCTACCTGACC

Product: cytochrome c-552

Products: NA

Alternate protein names: Cytochrome c552 [H]

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MKKILTLAATLSLAGATTAFAAPDGQALYGANCGICHQGGGVGAPGQFPPLANRIDKIASTPEGKKYVTQVLVNGLAGSI
QAGGATYVGFMPSFKSLPDDQIAAILTYLSSLGSTKPAPVFAAADLAAARAAPMSSSAVAAARKTLNAAHPLP

Sequences:

>Translated_153_residues
MKKILTLAATLSLAGATTAFAAPDGQALYGANCGICHQGGGVGAPGQFPPLANRIDKIASTPEGKKYVTQVLVNGLAGSI
QAGGATYVGFMPSFKSLPDDQIAAILTYLSSLGSTKPAPVFAAADLAAARAAPMSSSAVAAARKTLNAAHPLP
>Mature_153_residues
MKKILTLAATLSLAGATTAFAAPDGQALYGANCGICHQGGGVGAPGQFPPLANRIDKIASTPEGKKYVTQVLVNGLAGSI
QAGGATYVGFMPSFKSLPDDQIAAILTYLSSLGSTKPAPVFAAADLAAARAAPMSSSAVAAARKTLNAAHPLP

Specific function: This monoheme basic protein appears to function as an electron donor to cytochrome oxidase in T.thermophilus [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 15210; Mature: 15210

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILTLAATLSLAGATTAFAAPDGQALYGANCGICHQGGGVGAPGQFPPLANRIDKIAS
CCHHHHHHHHHHHHCCCCEEECCCCCEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHC
TPEGKKYVTQVLVNGLAGSIQAGGATYVGFMPSFKSLPDDQIAAILTYLSSLGSTKPAPV
CCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
FAAADLAAARAAPMSSSAVAAARKTLNAAHPLP
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKILTLAATLSLAGATTAFAAPDGQALYGANCGICHQGGGVGAPGQFPPLANRIDKIAS
CCHHHHHHHHHHHHCCCCEEECCCCCEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHC
TPEGKKYVTQVLVNGLAGSIQAGGATYVGFMPSFKSLPDDQIAAILTYLSSLGSTKPAPV
CCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
FAAADLAAARAAPMSSSAVAAARKTLNAAHPLP
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2986626; 11152119 [H]