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The map label for this gene is nrdR

Identifier: 162147539

GI number: 162147539

Start: 1779492

End: 1780028

Strand: Direct

Name: nrdR

Synonym: GDI_1755

Alternate gene names: 162147539

Gene position: 1779492-1780028 (Clockwise)

Preceding gene: 162147537

Following gene: 162147540

Centisome position: 45.12

GC content: 64.99

Gene sequence:

>537_bases
ATGCGATGCCCTTTTTGTGGTCACGAGGATACCCAGGTCAAAGACAGCCGCCCGCACGAGGATGGGGCCGCGATCCGTCG
CCGCCGGATCTGCGCGGCGTGCAGCCAGCGATTCACCACGATCGAGCGCGTGCAGTTGCGCGACCTGTATGTGGTCAAGG
CCGACGACCGGCGTGTGCCGTTCGAGCGCGACAAGCTGGCCCGATCGGTGCGCATCGCGTTGCGCAAGCGCCCGGTCGAT
GAGGAACGGATCGAACGCATCGTCAACGGGCTGGTTCGCCAGCTGGAGGCATCGGGCGAAACCGACATCCCGTCGCGCGA
TATCGGCAAGCTGGTGATGGGCACGCTGCGCGAGGTCGATATCGTGGCCTATATCCGCTTTGCCAGCGTGCATTGGGATT
TCCGGGAAACCAAGGATTTCGCCGCGATTCTGCAATCGATTCCCGGCACGGCGGACGGTGACGTGCCGGTCGTTCCCGGC
GACGCGGCGGCGGCGATCGCAGCAGAGTCTGGACCTGGCGGCGTAAAGAGGCGATGA

Upstream 100 bases:

>100_bases
CCGGGCAGGTGGTCGGCCGATCCTGACTGCCGCTCTTGCACCCGGCCGATTTCATGCGCATCTCGGTGCCAAACGAACGC
CGGTCAGGATTGCCGCACGC

Downstream 100 bases:

>100_bases
AGCCGCCTTCGGCGACATCGCGGCAGCAGGAGACAGGCGCATGAATGGCATACCGGACGACGACAGGACCCATTCGAAGC
CCCGGTCCCGGACCGCATCG

Product: NrdR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MRCPFCGHEDTQVKDSRPHEDGAAIRRRRICAACSQRFTTIERVQLRDLYVVKADDRRVPFERDKLARSVRIALRKRPVD
EERIERIVNGLVRQLEASGETDIPSRDIGKLVMGTLREVDIVAYIRFASVHWDFRETKDFAAILQSIPGTADGDVPVVPG
DAAAAIAAESGPGGVKRR

Sequences:

>Translated_178_residues
MRCPFCGHEDTQVKDSRPHEDGAAIRRRRICAACSQRFTTIERVQLRDLYVVKADDRRVPFERDKLARSVRIALRKRPVD
EERIERIVNGLVRQLEASGETDIPSRDIGKLVMGTLREVDIVAYIRFASVHWDFRETKDFAAILQSIPGTADGDVPVVPG
DAAAAIAAESGPGGVKRR
>Mature_178_residues
MRCPFCGHEDTQVKDSRPHEDGAAIRRRRICAACSQRFTTIERVQLRDLYVVKADDRRVPFERDKLARSVRIALRKRPVD
EERIERIVNGLVRQLEASGETDIPSRDIGKLVMGTLREVDIVAYIRFASVHWDFRETKDFAAILQSIPGTADGDVPVVPG
DAAAAIAAESGPGGVKRR

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain

Homologues:

Organism=Escherichia coli, GI1786615, Length=141, Percent_Identity=47.5177304964539, Blast_Score=130, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NRDR_GLUDA (A9HHY9)

Other databases:

- EMBL:   AM889285
- EMBL:   CP001189
- RefSeq:   YP_001602000.1
- RefSeq:   YP_002277873.1
- GeneID:   5790007
- GeneID:   6976987
- GenomeReviews:   AM889285_GR
- GenomeReviews:   CP001189_GR
- KEGG:   gdj:Gdia_3535
- HOGENOM:   HBG351755
- OMA:   FASVYRD
- ProtClustDB:   PRK00464
- GO:   GO:0006350
- HAMAP:   MF_00440
- InterPro:   IPR005144
- InterPro:   IPR003796
- TIGRFAMs:   TIGR00244

Pfam domain/function: PF03477 ATP-cone

EC number: NA

Molecular weight: Translated: 19936; Mature: 19936

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCPFCGHEDTQVKDSRPHEDGAAIRRRRICAACSQRFTTIERVQLRDLYVVKADDRRVP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCC
FERDKLARSVRIALRKRPVDEERIERIVNGLVRQLEASGETDIPSRDIGKLVMGTLREVD
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
IVAYIRFASVHWDFRETKDFAAILQSIPGTADGDVPVVPGDAAAAIAAESGPGGVKRR
HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHEEECCCCCCCCCCC
>Mature Secondary Structure
MRCPFCGHEDTQVKDSRPHEDGAAIRRRRICAACSQRFTTIERVQLRDLYVVKADDRRVP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCC
FERDKLARSVRIALRKRPVDEERIERIVNGLVRQLEASGETDIPSRDIGKLVMGTLREVD
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
IVAYIRFASVHWDFRETKDFAAILQSIPGTADGDVPVVPGDAAAAIAAESGPGGVKRR
HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA