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The map label for this gene is gspE [C]

Identifier: 162147493

GI number: 162147493

Start: 1730396

End: 1731832

Strand: Direct

Name: gspE [C]

Synonym: GDI_1709

Alternate gene names: 162147493

Gene position: 1730396-1731832 (Clockwise)

Preceding gene: 162147492

Following gene: 162147494

Centisome position: 43.87

GC content: 63.33

Gene sequence:

>1437_bases
ATGAGCTTCGGAAAGGGCTTCGGCCGGCTAGAGAACAAGCCTGTCGCCACCAGGCCGGATCCGGCGCCGAGCCAATCGGC
GGGGGGCCTTCAGCCTGTTCAGGAGCCGAGCCAGCCACCCGCCGTCCCGGCGGTTCCGGACCAGGCCCCCGTTGTCGATG
TCGAGGAAAACACGGCGACGAAAGCCCATTCGCTGGAATTGCGCGCGCTGTGCCTGGCCCGTCTGGATCCGGGCGTCGTG
CTCGCCCTGGCGCCCGAGCGGCTGGCCGAGGAAGTCGAACGCGTCGTTGGCCAGGCCGCATCCGAGCGGCGCATCCAGCT
CAACCTGCGCGAGCAGCGGGAAATCGCGACCGAACTTGTCCATGACATGCTCGGTCTCGGGCCGATCCAGCCCCTGCTGG
ACGACGAAACGATTTCGGACATCCTGATCAACGGGCCGAACCGGATCTTCGTGGAAAGGCGGGGCAAGACGGTCCTGTCG
AATGTCCGGTTCCGCGATGTCGATCATCTGGTGTCCGTCAGCCAGCGGATTGCCTCGGCTGTCGGGCGGCGCGTCGACGA
ATCCAGCCCGACCGTCGATGCGCGCCTGAAGGATGGATCGCGCGTCAATATCGTCTTTCCGCCGCTGGCGCTGGACGGTC
CCTATGTATCGATCCGGAAATTTTCCAAACGCCCGATCAATTTTTCCCGTCTGGTCGAAAATGGTAGCTGCACGCCCAAG
CTGGCGAAGATCCTGGAAATCGCGGGACGGGTGCGCCTGAATATCGTGATTTCGGGCGGCACGGGGTCGGGCAAGACCAC
CCTGATGAATGCGGTGTCGCATTTCATCGATTTCGACGAACGCGTCATCACGGTGGAAGACGCGGCGGAACTGCAGCTTC
AGCAGCCGCACGTCGTGCGTCTGGAAACCCGTCCCCCGTCGATCGAGGGCAAGGGGGAAGTCACCCAGCGCGATCTTGTG
CGCAATGCGCTGCGTATGCGCCCCGACCGGATCATCATCGGCGAGGTCCGAGGCGCCGAGGCGTTCGACATGCTGCAGGC
CATGAATACCGGCCATGACGGCAGCATGTCGACGATTCACGCCAACACCACCCGCGATGCCGTCACCCGTATCGAGAACA
TGGTCCAGATGGGCAGCTTCGGACTGCCGACCACGGCCATCCGGACCCAGATCGTGGGGGCGGTGGACATGATCGTGCAG
GTCGGCCGTCATCGCGACGGCGGCCGCCGGATCGTGCAGGTGACCGATGTCTCGGGGCTGGAGGGCGATGTCGTCGTCCT
GAACGATATCTTCAATTTCGTCTTCGACGGGGAAGACATGGACGGACGCCTGCACGGGCGGTACGAGGAATCGAAGATCC
GCCCGAGCTTTTTCGACAAGCTGAAATATTATGAGCTGGATCGTGCCTGGTACGCGGCGTTCGAAGAGCTTGAGTGA

Upstream 100 bases:

>100_bases
TGAAGCTGACGCACGAGGCCGCATCGGTGGTCGCCGACCAGCCGCATCATGCGCCCGGATTTTCGTCGGGCCTGTTCCGG
CGCCTGTTCGGTCGCGGCAC

Downstream 100 bases:

>100_bases
GCATGCTCGGGATTGTCCTGCTCAGCCTGCTGATGACGATATTCTCGCTGGTGACGAGTGTCGTTCTTCTGTACCGGCGC
AGCATGGCGACCGAACGACG

Product: type II/IV secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MSFGKGFGRLENKPVATRPDPAPSQSAGGLQPVQEPSQPPAVPAVPDQAPVVDVEENTATKAHSLELRALCLARLDPGVV
LALAPERLAEEVERVVGQAASERRIQLNLREQREIATELVHDMLGLGPIQPLLDDETISDILINGPNRIFVERRGKTVLS
NVRFRDVDHLVSVSQRIASAVGRRVDESSPTVDARLKDGSRVNIVFPPLALDGPYVSIRKFSKRPINFSRLVENGSCTPK
LAKILEIAGRVRLNIVISGGTGSGKTTLMNAVSHFIDFDERVITVEDAAELQLQQPHVVRLETRPPSIEGKGEVTQRDLV
RNALRMRPDRIIIGEVRGAEAFDMLQAMNTGHDGSMSTIHANTTRDAVTRIENMVQMGSFGLPTTAIRTQIVGAVDMIVQ
VGRHRDGGRRIVQVTDVSGLEGDVVVLNDIFNFVFDGEDMDGRLHGRYEESKIRPSFFDKLKYYELDRAWYAAFEELE

Sequences:

>Translated_478_residues
MSFGKGFGRLENKPVATRPDPAPSQSAGGLQPVQEPSQPPAVPAVPDQAPVVDVEENTATKAHSLELRALCLARLDPGVV
LALAPERLAEEVERVVGQAASERRIQLNLREQREIATELVHDMLGLGPIQPLLDDETISDILINGPNRIFVERRGKTVLS
NVRFRDVDHLVSVSQRIASAVGRRVDESSPTVDARLKDGSRVNIVFPPLALDGPYVSIRKFSKRPINFSRLVENGSCTPK
LAKILEIAGRVRLNIVISGGTGSGKTTLMNAVSHFIDFDERVITVEDAAELQLQQPHVVRLETRPPSIEGKGEVTQRDLV
RNALRMRPDRIIIGEVRGAEAFDMLQAMNTGHDGSMSTIHANTTRDAVTRIENMVQMGSFGLPTTAIRTQIVGAVDMIVQ
VGRHRDGGRRIVQVTDVSGLEGDVVVLNDIFNFVFDGEDMDGRLHGRYEESKIRPSFFDKLKYYELDRAWYAAFEELE
>Mature_477_residues
SFGKGFGRLENKPVATRPDPAPSQSAGGLQPVQEPSQPPAVPAVPDQAPVVDVEENTATKAHSLELRALCLARLDPGVVL
ALAPERLAEEVERVVGQAASERRIQLNLREQREIATELVHDMLGLGPIQPLLDDETISDILINGPNRIFVERRGKTVLSN
VRFRDVDHLVSVSQRIASAVGRRVDESSPTVDARLKDGSRVNIVFPPLALDGPYVSIRKFSKRPINFSRLVENGSCTPKL
AKILEIAGRVRLNIVISGGTGSGKTTLMNAVSHFIDFDERVITVEDAAELQLQQPHVVRLETRPPSIEGKGEVTQRDLVR
NALRMRPDRIIIGEVRGAEAFDMLQAMNTGHDGSMSTIHANTTRDAVTRIENMVQMGSFGLPTTAIRTQIVGAVDMIVQV
GRHRDGGRRIVQVTDVSGLEGDVVVLNDIFNFVFDGEDMDGRLHGRYEESKIRPSFFDKLKYYELDRAWYAAFEELE

Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 52737; Mature: 52606

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFGKGFGRLENKPVATRPDPAPSQSAGGLQPVQEPSQPPAVPAVPDQAPVVDVEENTAT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
KAHSLELRALCLARLDPGVVLALAPERLAEEVERVVGQAASERRIQLNLREQREIATELV
HHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHH
HDMLGLGPIQPLLDDETISDILINGPNRIFVERRGKTVLSNVRFRDVDHLVSVSQRIASA
HHHHCCCCCCHHCCCCHHHHHEECCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHH
VGRRVDESSPTVDARLKDGSRVNIVFPPLALDGPYVSIRKFSKRPINFSRLVENGSCTPK
HHHCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCHHHHHHCCCCCCHHHHHCCCCCCHH
LAKILEIAGRVRLNIVISGGTGSGKTTLMNAVSHFIDFDERVITVEDAAELQLQQPHVVR
HHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHEECCCCEEE
LETRPPSIEGKGEVTQRDLVRNALRMRPDRIIIGEVRGAEAFDMLQAMNTGHDGSMSTIH
EECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCEEEE
ANTTRDAVTRIENMVQMGSFGLPTTAIRTQIVGAVDMIVQVGRHRDGGRRIVQVTDVSGL
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC
EGDVVVLNDIFNFVFDGEDMDGRLHGRYEESKIRPSFFDKLKYYELDRAWYAAFEELE
CCCEEEHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFGKGFGRLENKPVATRPDPAPSQSAGGLQPVQEPSQPPAVPAVPDQAPVVDVEENTAT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
KAHSLELRALCLARLDPGVVLALAPERLAEEVERVVGQAASERRIQLNLREQREIATELV
HHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHH
HDMLGLGPIQPLLDDETISDILINGPNRIFVERRGKTVLSNVRFRDVDHLVSVSQRIASA
HHHHCCCCCCHHCCCCHHHHHEECCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHH
VGRRVDESSPTVDARLKDGSRVNIVFPPLALDGPYVSIRKFSKRPINFSRLVENGSCTPK
HHHCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCHHHHHHCCCCCCHHHHHCCCCCCHH
LAKILEIAGRVRLNIVISGGTGSGKTTLMNAVSHFIDFDERVITVEDAAELQLQQPHVVR
HHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHEECCCCEEE
LETRPPSIEGKGEVTQRDLVRNALRMRPDRIIIGEVRGAEAFDMLQAMNTGHDGSMSTIH
EECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCEEEE
ANTTRDAVTRIENMVQMGSFGLPTTAIRTQIVGAVDMIVQVGRHRDGGRRIVQVTDVSGL
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC
EGDVVVLNDIFNFVFDGEDMDGRLHGRYEESKIRPSFFDKLKYYELDRAWYAAFEELE
CCCEEEHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]