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The map label for this gene is flgF [H]

Identifier: 162147479

GI number: 162147479

Start: 1717690

End: 1718454

Strand: Direct

Name: flgF [H]

Synonym: GDI_1695

Alternate gene names: 162147479

Gene position: 1717690-1718454 (Clockwise)

Preceding gene: 162147475

Following gene: 162147480

Centisome position: 43.55

GC content: 62.09

Gene sequence:

>765_bases
ATGTCCTTCCGGAGCCGGATATTGGAAAACACGACCTACATCGCCCTGTCCCGCGTCGACGTGCTGTCCCGCGCGCTCGA
AGTGACGGCCAACAACCTGGCCAACGCGAACACGGACGGTTTCAAGGCCTCGAAGGAGCTGTTCTCGGACTATCTCGTCC
AGCAGAAGGACGTGCATGGGCTGCCGGGCGACAAGGAAGAGGTGTACACTCAGGACAGGTCGACCTATCAGGACCGTCTG
CAGGGGGCGTTGCGGCAGACGGGCAACCTGACGGATTTCGCCATCAATGGCGAGGGCTATTTCGCCGTTCGCACCACGCA
GGGGGTCCGGCTGACCCGCAATGGTGAATTCAACCGTCGCGCGGACGGGACGATCGTCGATGGTTCGGGAAACCCGCTGA
TCGACAGGAACGGCAACAACGTGGTCATCCCGCCGCGGGATCATACGCTGTCGGTGGCGTCGGACGGAACGATGTCGACT
GAAACCGGACGGGTCGCCACGCTGGACCTTGTGACCGTCGACAACCCCAATACCCTGGTGCCGGAGGGCGGCTACCTCCT
GCGGCCGACGACGCCGACCCGGAACGTGGCCAACAAGGAAATACGGCAGGGGATGCTGGAGTCGAGCAACGTGAACGCCG
TTTCCGAAACGACGGAGATGGTCGAGATCCAGCGCGATTACGACCTGACCTTCCAGTTGATCCAGACGGAATCCACCCGC
CAGTCCAACGCGATAGACAAGATCACGGCCGACCCGACCACATAG

Upstream 100 bases:

>100_bases
ATAGGCGGACGCCACCGCCATGGCAAGGCCTTTTCTGAAGTGTTGCCGTTGTCATGGCGATCCGATATCCTGAATCGCAG
GCGGGCCGCCCAGCCGGACC

Downstream 100 bases:

>100_bases
GCCCGACCGCGCGCGCAAAAGCCTTGTATTGGCCATGAACATACGCCATACGAAGGCAGTAGTGTTGCATGGGCATTGTG
TGGCCGTGATTCGCGCGAGG

Product: flagellar basal-body rod protein flgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MSFRSRILENTTYIALSRVDVLSRALEVTANNLANANTDGFKASKELFSDYLVQQKDVHGLPGDKEEVYTQDRSTYQDRL
QGALRQTGNLTDFAINGEGYFAVRTTQGVRLTRNGEFNRRADGTIVDGSGNPLIDRNGNNVVIPPRDHTLSVASDGTMST
ETGRVATLDLVTVDNPNTLVPEGGYLLRPTTPTRNVANKEIRQGMLESSNVNAVSETTEMVEIQRDYDLTFQLIQTESTR
QSNAIDKITADPTT

Sequences:

>Translated_254_residues
MSFRSRILENTTYIALSRVDVLSRALEVTANNLANANTDGFKASKELFSDYLVQQKDVHGLPGDKEEVYTQDRSTYQDRL
QGALRQTGNLTDFAINGEGYFAVRTTQGVRLTRNGEFNRRADGTIVDGSGNPLIDRNGNNVVIPPRDHTLSVASDGTMST
ETGRVATLDLVTVDNPNTLVPEGGYLLRPTTPTRNVANKEIRQGMLESSNVNAVSETTEMVEIQRDYDLTFQLIQTESTR
QSNAIDKITADPTT
>Mature_253_residues
SFRSRILENTTYIALSRVDVLSRALEVTANNLANANTDGFKASKELFSDYLVQQKDVHGLPGDKEEVYTQDRSTYQDRLQ
GALRQTGNLTDFAINGEGYFAVRTTQGVRLTRNGEFNRRADGTIVDGSGNPLIDRNGNNVVIPPRDHTLSVASDGTMSTE
TGRVATLDLVTVDNPNTLVPEGGYLLRPTTPTRNVANKEIRQGMLESSNVNAVSETTEMVEIQRDYDLTFQLIQTESTRQ
SNAIDKITADPTT

Specific function: Unknown

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787318, Length=252, Percent_Identity=31.3492063492063, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 28007; Mature: 27876

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFRSRILENTTYIALSRVDVLSRALEVTANNLANANTDGFKASKELFSDYLVQQKDVHG
CCHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC
LPGDKEEVYTQDRSTYQDRLQGALRQTGNLTDFAINGEGYFAVRTTQGVRLTRNGEFNRR
CCCCHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCEEEEECCCCCCC
ADGTIVDGSGNPLIDRNGNNVVIPPRDHTLSVASDGTMSTETGRVATLDLVTVDNPNTLV
CCCEEECCCCCEEEECCCCEEEECCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCEEC
PEGGYLLRPTTPTRNVANKEIRQGMLESSNVNAVSETTEMVEIQRDYDLTFQLIQTESTR
CCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCCEEEEEEECCCCC
QSNAIDKITADPTT
CCCCCCCCCCCCCC
>Mature Secondary Structure 
SFRSRILENTTYIALSRVDVLSRALEVTANNLANANTDGFKASKELFSDYLVQQKDVHG
CHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC
LPGDKEEVYTQDRSTYQDRLQGALRQTGNLTDFAINGEGYFAVRTTQGVRLTRNGEFNRR
CCCCHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCEEEEECCCCCCC
ADGTIVDGSGNPLIDRNGNNVVIPPRDHTLSVASDGTMSTETGRVATLDLVTVDNPNTLV
CCCEEECCCCCEEEECCCCEEEECCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCEEC
PEGGYLLRPTTPTRNVANKEIRQGMLESSNVNAVSETTEMVEIQRDYDLTFQLIQTESTR
CCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCCEEEEEEECCCCC
QSNAIDKITADPTT
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1474584; 11259647 [H]