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The map label for this gene is flgH [H]

Identifier: 162147476

GI number: 162147476

Start: 1714889

End: 1715641

Strand: Reverse

Name: flgH [H]

Synonym: GDI_1692

Alternate gene names: 162147476

Gene position: 1715641-1714889 (Counterclockwise)

Preceding gene: 162147477

Following gene: 162147450

Centisome position: 43.5

GC content: 62.82

Gene sequence:

>753_bases
ATGCGTTGGGACCTTTCAGTGACGCAATATTACCTAGCGGGCGCGGCCATGGCAGGCCTGCTGTTCCTGACCGGATGTGC
CGGCCTGTCGGATCTCAGCGAGAACGGCCATCCGCCGCGCATGACCACGACATCGGACCCGACGCAGAGTCCCGATTACC
GGCCGGTCACGATGCCGATGCCGCCGCTCCAGGCGCCGCCTACGGAAGTCGGTAGTCTGTGGCGACCGGGAAGCCGATCC
TTCTTCAAGGACCAGCGGGCATCGCAGGTTGGCGACCTTATCACGATCATCGTGCAGGTGGCCGACAACGCCAACATCGT
CAACAATACGTCGGCTGCCGGCAGCGGGTCCGAAGATTTCGGCATTCCCAGCATCTTCGGCCTCAAGGGCAAGGTGGCGT
CACACCTTTCCAGTTCGAGCGCCCTCAACACGAGCAGCGCCACCGCCAACACGGCAACAGGCAGGATCACCAGGACCGAG
GCAGTCGGCCTCACCCTGGGCGGGACGATCACGCAGGTCTTGCCGAACGGCAATTTCGTCGTGGTGGCCCGCCAGGAAGT
CAGGGTCAACGGCGAATTGCGGCAGCTTATGGTCAGCGGCGTCGTCCGGCCCCAGGACATCACGGAAGATAACACGGTGA
CCCATGACAGGATCGCCGAGGCCCGGATTTCATATGGCGGACGCGGTCAGTTGACCAAGCTCCAGACGCCGCGATACGGG
CAGCAGATCCTGGATAACGTTCTTCCGTTCTGA

Upstream 100 bases:

>100_bases
AGATCGACGGCCGTGCCTTCGAATTCGAACGCCCTGCGGCTTCTGACCGCGTCCGCCCGCCCGAACACGCGGGCGGAGTC
TTCGTTCCGGTAATCGCCAG

Downstream 100 bases:

>100_bases
ATCGACAGCGTGTCGTAACCTGTCAGAAAAAATCGATCTCGCCGGAAGGATGCGTCATGTCCGGCGCGCTCTCGCCCCTC
AGCACTTGCTGAACGGCGCT

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MRWDLSVTQYYLAGAAMAGLLFLTGCAGLSDLSENGHPPRMTTTSDPTQSPDYRPVTMPMPPLQAPPTEVGSLWRPGSRS
FFKDQRASQVGDLITIIVQVADNANIVNNTSAAGSGSEDFGIPSIFGLKGKVASHLSSSSALNTSSATANTATGRITRTE
AVGLTLGGTITQVLPNGNFVVVARQEVRVNGELRQLMVSGVVRPQDITEDNTVTHDRIAEARISYGGRGQLTKLQTPRYG
QQILDNVLPF

Sequences:

>Translated_250_residues
MRWDLSVTQYYLAGAAMAGLLFLTGCAGLSDLSENGHPPRMTTTSDPTQSPDYRPVTMPMPPLQAPPTEVGSLWRPGSRS
FFKDQRASQVGDLITIIVQVADNANIVNNTSAAGSGSEDFGIPSIFGLKGKVASHLSSSSALNTSSATANTATGRITRTE
AVGLTLGGTITQVLPNGNFVVVARQEVRVNGELRQLMVSGVVRPQDITEDNTVTHDRIAEARISYGGRGQLTKLQTPRYG
QQILDNVLPF
>Mature_250_residues
MRWDLSVTQYYLAGAAMAGLLFLTGCAGLSDLSENGHPPRMTTTSDPTQSPDYRPVTMPMPPLQAPPTEVGSLWRPGSRS
FFKDQRASQVGDLITIIVQVADNANIVNNTSAAGSGSEDFGIPSIFGLKGKVASHLSSSSALNTSSATANTATGRITRTE
AVGLTLGGTITQVLPNGNFVVVARQEVRVNGELRQLMVSGVVRPQDITEDNTVTHDRIAEARISYGGRGQLTKLQTPRYG
QQILDNVLPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=232, Percent_Identity=26.7241379310345, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 26644; Mature: 26644

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWDLSVTQYYLAGAAMAGLLFLTGCAGLSDLSENGHPPRMTTTSDPTQSPDYRPVTMPM
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCC
PPLQAPPTEVGSLWRPGSRSFFKDQRASQVGDLITIIVQVADNANIVNNTSAAGSGSEDF
CCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCC
GIPSIFGLKGKVASHLSSSSALNTSSATANTATGRITRTEAVGLTLGGTITQVLPNGNFV
CCCEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEECCCCCEE
VVARQEVRVNGELRQLMVSGVVRPQDITEDNTVTHDRIAEARISYGGRGQLTKLQTPRYG
EEEECCEECCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCHHH
QQILDNVLPF
HHHHHHHCCC
>Mature Secondary Structure
MRWDLSVTQYYLAGAAMAGLLFLTGCAGLSDLSENGHPPRMTTTSDPTQSPDYRPVTMPM
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCC
PPLQAPPTEVGSLWRPGSRSFFKDQRASQVGDLITIIVQVADNANIVNNTSAAGSGSEDF
CCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCC
GIPSIFGLKGKVASHLSSSSALNTSSATANTATGRITRTEAVGLTLGGTITQVLPNGNFV
CCCEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEECCCCCEE
VVARQEVRVNGELRQLMVSGVVRPQDITEDNTVTHDRIAEARISYGGRGQLTKLQTPRYG
EEEECCEECCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCHHH
QQILDNVLPF
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA