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The map label for this gene is flgD [H]

Identifier: 162147458

GI number: 162147458

Start: 1699641

End: 1700417

Strand: Direct

Name: flgD [H]

Synonym: GDI_1674

Alternate gene names: 162147458

Gene position: 1699641-1700417 (Clockwise)

Preceding gene: 162147457

Following gene: 162147459

Centisome position: 43.09

GC content: 61.78

Gene sequence:

>777_bases
ATGACGACGACATCGAGCATCAGCAGCGAGTATCAGCTTGTCCAGGCGGCGGAATCGTCCGCCAAGACGTCGGCGAGCAG
CTATGCGAGCAGCAGCGCCGCCACCGGAACGGGCAGCAGTTCCGTATCGAGCCTCGCGTCGCTCGCGGATAATTACAACA
CCTTCCTGACCCTGCTGACGACGCAGTTGCAGAACCAGGACCCAAGCAGCCCGATGAGTTCCGACACCTTTACGCAGGAA
CTCGCGCAGTTCGCCGGGGTGGAGCAGCAGGTCCAGACCAATACCAATCTTTCGACCCTGATTTCGCTGAACGAGGAAAG
CCAGCTTAATTCCGATGCCAGCCTGGTCGGCAAGACGGCGACCGCGGATTCGACGACGCTGCCCCTGCAGAATGGTTCCG
CTTCCCTCAGTTTCACGGGAACCGCCGGCGAGACGGTTGCGATCGCTGTGGCCAATTCCTCCGGCACGGTCGTGAAGGAC
GTCGTCGCCACCGCCGACAGCGGTACCAACACGTGGACGTGGGACGGAACGGACAATAGCGGCAACCAGTTGACGGACGG
TGCCTACAGCGTCGCGGTGGAGACGATCAATTCCTCCGGTACGACCTCTGCCGTGCCGTTCACGGTCAGCGGCACCATCA
CGGGCGTGACGAAGGGAAGCACCGATATGGAAGCCGAAATGGGAAGCGCGGATATTCCGATGGCGGACATCACGGCGACC
TCGTCCTCCACATCGTCAACGTCGACGTCGTCCAGTGGAAGCAGCACCGGCTCCTGA

Upstream 100 bases:

>100_bases
ACGGGTCCACGATGCCTGTTCGGGCCAGCGCGGGAAGCGGAATCAACATTACTGCATGACCGCGGGTATGGTCACGGTGG
CAGGGGAAGGATAAGAGGGA

Downstream 100 bases:

>100_bases
TTGTCGCCGCCACGGCCGAAGGCGGCAGTTGGCCTGTCTGCCTTCTGCCGGCTTCGCTGGATATGGCAGTGATGCGTGAA
TCGATGTATCCGGTCCCGTA

Product: basal-body rod modification protein flgD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MTTTSSISSEYQLVQAAESSAKTSASSYASSSAATGTGSSSVSSLASLADNYNTFLTLLTTQLQNQDPSSPMSSDTFTQE
LAQFAGVEQQVQTNTNLSTLISLNEESQLNSDASLVGKTATADSTTLPLQNGSASLSFTGTAGETVAIAVANSSGTVVKD
VVATADSGTNTWTWDGTDNSGNQLTDGAYSVAVETINSSGTTSAVPFTVSGTITGVTKGSTDMEAEMGSADIPMADITAT
SSSTSSTSTSSSGSSTGS

Sequences:

>Translated_258_residues
MTTTSSISSEYQLVQAAESSAKTSASSYASSSAATGTGSSSVSSLASLADNYNTFLTLLTTQLQNQDPSSPMSSDTFTQE
LAQFAGVEQQVQTNTNLSTLISLNEESQLNSDASLVGKTATADSTTLPLQNGSASLSFTGTAGETVAIAVANSSGTVVKD
VVATADSGTNTWTWDGTDNSGNQLTDGAYSVAVETINSSGTTSAVPFTVSGTITGVTKGSTDMEAEMGSADIPMADITAT
SSSTSSTSTSSSGSSTGS
>Mature_257_residues
TTTSSISSEYQLVQAAESSAKTSASSYASSSAATGTGSSSVSSLASLADNYNTFLTLLTTQLQNQDPSSPMSSDTFTQEL
AQFAGVEQQVQTNTNLSTLISLNEESQLNSDASLVGKTATADSTTLPLQNGSASLSFTGTAGETVAIAVANSSGTVVKDV
VATADSGTNTWTWDGTDNSGNQLTDGAYSVAVETINSSGTTSAVPFTVSGTITGVTKGSTDMEAEMGSADIPMADITATS
SSTSSTSTSSSGSSTGS

Specific function: Required for flagellar hook formation. May act as a scaffolding protein [H]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgD family [H]

Homologues:

Organism=Escherichia coli, GI1787315, Length=191, Percent_Identity=29.3193717277487, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005648 [H]

Pfam domain/function: PF03963 FlgD [H]

EC number: NA

Molecular weight: Translated: 25796; Mature: 25664

Theoretical pI: Translated: 3.38; Mature: 3.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTSSISSEYQLVQAAESSAKTSASSYASSSAATGTGSSSVSSLASLADNYNTFLTLLT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHH
TQLQNQDPSSPMSSDTFTQELAQFAGVEQQVQTNTNLSTLISLNEESQLNSDASLVGKTA
HHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCEEEEEEECCHHCCCCCHHHHCCCC
TADSTTLPLQNGSASLSFTGTAGETVAIAVANSSGTVVKDVVATADSGTNTWTWDGTDNS
CCCCCEEEECCCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHCCCCCCEEEECCCCCC
GNQLTDGAYSVAVETINSSGTTSAVPFTVSGTITGVTKGSTDMEAEMGSADIPMADITAT
CCCCCCCCEEEEEEEECCCCCCCCCEEEECCEEEEEECCCCCCHHHCCCCCCCEEEEEEC
SSSTSSTSTSSSGSSTGS
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTTSSISSEYQLVQAAESSAKTSASSYASSSAATGTGSSSVSSLASLADNYNTFLTLLT
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHH
TQLQNQDPSSPMSSDTFTQELAQFAGVEQQVQTNTNLSTLISLNEESQLNSDASLVGKTA
HHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCEEEEEEECCHHCCCCCHHHHCCCC
TADSTTLPLQNGSASLSFTGTAGETVAIAVANSSGTVVKDVVATADSGTNTWTWDGTDNS
CCCCCEEEECCCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHCCCCCCEEEECCCCCC
GNQLTDGAYSVAVETINSSGTTSAVPFTVSGTITGVTKGSTDMEAEMGSADIPMADITAT
CCCCCCCCEEEEEEEECCCCCCCCCEEEECCEEEEEECCCCCCHHHCCCCCCCEEEEEEC
SSSTSSTSTSSSGSSTGS
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]