| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is ctrA [H]
Identifier: 162147449
GI number: 162147449
Start: 1689940
End: 1690773
Strand: Direct
Name: ctrA [H]
Synonym: GDI_1665
Alternate gene names: 162147449
Gene position: 1689940-1690773 (Clockwise)
Preceding gene: 162147448
Following gene: 162147451
Centisome position: 42.85
GC content: 63.91
Gene sequence:
>834_bases ATGGCTGTCGGCACTTACGCTGCGGGAATGGATATGCAGATACTTTGTATCGGTGACAGTTCGGCCGATGGTGATGGAAG GCCGTGCAGCGGATTGGCGAAAGCCGCGATCGAGGGGGCGGTGTCGATAACGATGTCGGGCCCCGAGGGGAGCGTGGAAA CATTGCGCCGCTCCCATTACGACCTCGCCGTGATCCAGCAGGGATCGCCGAATGCACGGCTGCTGCGCCGCATACGCAGC AGCCGCGTTCCGACGCCGGTCATCATCATTGCCCGGGACACGACTCCGCCCGCGATCGCCGAGGTCCTTTCCGTCGGTGC CGATGACTGCGTTCCCGCCTCGATCGACCCCACGGAACTTCTGGCCCGCCTGCGCGCCATCGTCCGGCGCGCCGGCGGGC ATGACAGCCTGACGCTCCAGATCGGACGCCTGACCGTGAACGTGAACCAGCGGGAGGTCCATATCGACGGGAAGCCGGTT CCACTGACCCGGCGGGAATATGACGTGGTCGAGCTTCTGGCGCTGCGCAAGAATCAGGCACTGAGCAAGGAGTCCGTCCT CGACAGCCTCTATGCCGGACAGCACGAGCCGAGTGGCAAGGTCATCGACGTCATGATCTGCAAGATCCGCAAGAAGATGC GTGGCCTGGGCATAGAGGAACCGTTGACGACGCAATGGGGCATTGGCTACCGCCTCAACGAGGACGCCTTCGCTCCGCTG GGTGCCCGGATGGATGGAATCGTCGGGCAGGGGCCAAGGGAGTCCTGTATTCCCGTGACGCCGGGCATCGCCATCATGGC CCCCTCGGGGGCTCGATCATCCCAGACAAACTGA
Upstream 100 bases:
>100_bases CCTCAGTCTATGGGATGGCCATGGCCAAGCCAAGGTGTTTTTTGGCTTATGGCATCCGCTTATAAGGGATAGATAGCTGG GGGCCGGTTCCCATGCCAGG
Downstream 100 bases:
>100_bases AGCGGCCGGAGGCGAGGGGGCTGGTCAGGATCAGGTCGCGTCGGCGCCGAATTCCTGCATGTTGTGGCTGCCTGTGAGTT CCAGGCCATCGCGAACATTC
Product: two component response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MAVGTYAAGMDMQILCIGDSSADGDGRPCSGLAKAAIEGAVSITMSGPEGSVETLRRSHYDLAVIQQGSPNARLLRRIRS SRVPTPVIIIARDTTPPAIAEVLSVGADDCVPASIDPTELLARLRAIVRRAGGHDSLTLQIGRLTVNVNQREVHIDGKPV PLTRREYDVVELLALRKNQALSKESVLDSLYAGQHEPSGKVIDVMICKIRKKMRGLGIEEPLTTQWGIGYRLNEDAFAPL GARMDGIVGQGPRESCIPVTPGIAIMAPSGARSSQTN
Sequences:
>Translated_277_residues MAVGTYAAGMDMQILCIGDSSADGDGRPCSGLAKAAIEGAVSITMSGPEGSVETLRRSHYDLAVIQQGSPNARLLRRIRS SRVPTPVIIIARDTTPPAIAEVLSVGADDCVPASIDPTELLARLRAIVRRAGGHDSLTLQIGRLTVNVNQREVHIDGKPV PLTRREYDVVELLALRKNQALSKESVLDSLYAGQHEPSGKVIDVMICKIRKKMRGLGIEEPLTTQWGIGYRLNEDAFAPL GARMDGIVGQGPRESCIPVTPGIAIMAPSGARSSQTN >Mature_276_residues AVGTYAAGMDMQILCIGDSSADGDGRPCSGLAKAAIEGAVSITMSGPEGSVETLRRSHYDLAVIQQGSPNARLLRRIRSS RVPTPVIIIARDTTPPAIAEVLSVGADDCVPASIDPTELLARLRAIVRRAGGHDSLTLQIGRLTVNVNQREVHIDGKPVP LTRREYDVVELLALRKNQALSKESVLDSLYAGQHEPSGKVIDVMICKIRKKMRGLGIEEPLTTQWGIGYRLNEDAFAPLG ARMDGIVGQGPRESCIPVTPGIAIMAPSGARSSQTN
Specific function: Essential protein that plays a role in the control of cell division, possibly through the transcriptional regulation of ccrM, rpoD, pleC, minC and ftsZ genes [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790552, Length=207, Percent_Identity=32.8502415458937, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1787375, Length=173, Percent_Identity=31.7919075144509, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1789809, Length=237, Percent_Identity=26.5822784810127, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1789402, Length=227, Percent_Identity=29.9559471365639, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI2367329, Length=137, Percent_Identity=30.6569343065693, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790860, Length=133, Percent_Identity=27.8195488721804, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1788394, Length=137, Percent_Identity=28.4671532846715, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI1787229, Length=207, Percent_Identity=28.9855072463768, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI1786784, Length=225, Percent_Identity=24, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 29522; Mature: 29391
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVGTYAAGMDMQILCIGDSSADGDGRPCSGLAKAAIEGAVSITMSGPEGSVETLRRSHY CCCCCEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCHHHHHHHCCC DLAVIQQGSPNARLLRRIRSSRVPTPVIIIARDTTPPAIAEVLSVGADDCVPASIDPTEL CEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHH LARLRAIVRRAGGHDSLTLQIGRLTVNVNQREVHIDGKPVPLTRREYDVVELLALRKNQA HHHHHHHHHHCCCCCEEEEEEEEEEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHCCC LSKESVLDSLYAGQHEPSGKVIDVMICKIRKKMRGLGIEEPLTTQWGIGYRLNEDAFAPL CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCC GARMDGIVGQGPRESCIPVTPGIAIMAPSGARSSQTN CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure AVGTYAAGMDMQILCIGDSSADGDGRPCSGLAKAAIEGAVSITMSGPEGSVETLRRSHY CCCCEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCHHHHHHHCCC DLAVIQQGSPNARLLRRIRSSRVPTPVIIIARDTTPPAIAEVLSVGADDCVPASIDPTEL CEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHH LARLRAIVRRAGGHDSLTLQIGRLTVNVNQREVHIDGKPVPLTRREYDVVELLALRKNQA HHHHHHHHHHCCCCCEEEEEEEEEEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHCCC LSKESVLDSLYAGQHEPSGKVIDVMICKIRKKMRGLGIEEPLTTQWGIGYRLNEDAFAPL CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCC GARMDGIVGQGPRESCIPVTPGIAIMAPSGARSSQTN CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA