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The map label for this gene is fliR [H]

Identifier: 162147443

GI number: 162147443

Start: 1680131

End: 1680943

Strand: Direct

Name: fliR [H]

Synonym: GDI_1659

Alternate gene names: 162147443

Gene position: 1680131-1680943 (Clockwise)

Preceding gene: 162147442

Following gene: 162147444

Centisome position: 42.6

GC content: 65.19

Gene sequence:

>813_bases
ATGACGGGCGATCCGTCCTTTCCTGGCGGATCGTTGCCAGTTCTCGCCACCATGTTCCTCGTCGTCCTGTGCCGTGTCAG
CGCCCTGGTCATGGCGGCTCCCGGCCTGGGCGAGACGACGTCCCCGATGCGCGTCAGGGCCGGGATCGCGGTCTCCGCCA
CCGTCGCCATCCTGCCGGTGGTCCAGGATCGGCTCGTGGAGGTATCCGGGACGGCGTTGCGCATGCCGTCCGTGGCGATC
GCGGTGGTCGTCGGCGAATTGCTGTGCGGGGTCTTCATCGGATGGCTGGCGCGGCTGGTGACCATGGCGATCAGTATCGC
CATGCAGGTCGTTGCCGTTTTTACCGGCCTGGCCAGTGTGCTCCAGCCGGATTCCGAACTTGGCGCGTCGAGTACCGCGA
TCAGCCACATGGCATCGATGCTGATCCCCGTCATTTTCCTTTCAACGGGCCTTTATGCCTTGCCGCTGGCTGCGATCACG
GGGTCGTACAGCCTGTTCCCGCCGGGCCATATGCCCATGGTCGGCGACATGGCCAGGAGCGTCACGGAAGCCACGTCGCA
GACATTCGCGCTGGCGCTGCAACTGGCCGCGCCGTTCGTCCTGATCGGGACCTTGTGGCCAGCCATGCTGGGCGTGTTGA
ACCGGCTTCTTCCATCGATCCAGGTCTATTCCATCGCCATGCCGGCACAGTTGCTGGGTGGGGTCATTCTCCTGGCCATG
CTGATCCAGGTGATGACGGGCGTCTGGCAGGAAAGGGTGGCCGATCTGCTCGTGGCTCTGCCTGGCACCGGCGGCAGTCC
GCCGCACCACTGA

Upstream 100 bases:

>100_bases
TATTCCACGCTGAATACATACGCTCACGTCATTTTCGACCAGATGGTCATGGTCGGCGGTTCGTGACAGGCGGCCGCGCA
CGGATGATCGCCGCGCCGGA

Downstream 100 bases:

>100_bases
AACCGCATTGATTTAGGGCACGCACGCACATGGCGGAAGGATCGGGCGGTGGCGAGAAGAGCCAGGACCCTACCGGGAAA
AGGCTGGAGACCGCGCGGGA

Product: flagellar biosynthetic protein fliR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MTGDPSFPGGSLPVLATMFLVVLCRVSALVMAAPGLGETTSPMRVRAGIAVSATVAILPVVQDRLVEVSGTALRMPSVAI
AVVVGELLCGVFIGWLARLVTMAISIAMQVVAVFTGLASVLQPDSELGASSTAISHMASMLIPVIFLSTGLYALPLAAIT
GSYSLFPPGHMPMVGDMARSVTEATSQTFALALQLAAPFVLIGTLWPAMLGVLNRLLPSIQVYSIAMPAQLLGGVILLAM
LIQVMTGVWQERVADLLVALPGTGGSPPHH

Sequences:

>Translated_270_residues
MTGDPSFPGGSLPVLATMFLVVLCRVSALVMAAPGLGETTSPMRVRAGIAVSATVAILPVVQDRLVEVSGTALRMPSVAI
AVVVGELLCGVFIGWLARLVTMAISIAMQVVAVFTGLASVLQPDSELGASSTAISHMASMLIPVIFLSTGLYALPLAAIT
GSYSLFPPGHMPMVGDMARSVTEATSQTFALALQLAAPFVLIGTLWPAMLGVLNRLLPSIQVYSIAMPAQLLGGVILLAM
LIQVMTGVWQERVADLLVALPGTGGSPPHH
>Mature_269_residues
TGDPSFPGGSLPVLATMFLVVLCRVSALVMAAPGLGETTSPMRVRAGIAVSATVAILPVVQDRLVEVSGTALRMPSVAIA
VVVGELLCGVFIGWLARLVTMAISIAMQVVAVFTGLASVLQPDSELGASSTAISHMASMLIPVIFLSTGLYALPLAAITG
SYSLFPPGHMPMVGDMARSVTEATSQTFALALQLAAPFVLIGTLWPAMLGVLNRLLPSIQVYSIAMPAQLLGGVILLAML
IQVMTGVWQERVADLLVALPGTGGSPPHH

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 27866; Mature: 27735

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGDPSFPGGSLPVLATMFLVVLCRVSALVMAAPGLGETTSPMRVRAGIAVSATVAILPV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHH
VQDRLVEVSGTALRMPSVAIAVVVGELLCGVFIGWLARLVTMAISIAMQVVAVFTGLASV
HHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQPDSELGASSTAISHMASMLIPVIFLSTGLYALPLAAITGSYSLFPPGHMPMVGDMARS
HCCCHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
VTEATSQTFALALQLAAPFVLIGTLWPAMLGVLNRLLPSIQVYSIAMPAQLLGGVILLAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LIQVMTGVWQERVADLLVALPGTGGSPPHH
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TGDPSFPGGSLPVLATMFLVVLCRVSALVMAAPGLGETTSPMRVRAGIAVSATVAILPV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHH
VQDRLVEVSGTALRMPSVAIAVVVGELLCGVFIGWLARLVTMAISIAMQVVAVFTGLASV
HHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQPDSELGASSTAISHMASMLIPVIFLSTGLYALPLAAITGSYSLFPPGHMPMVGDMARS
HCCCHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
VTEATSQTFALALQLAAPFVLIGTLWPAMLGVLNRLLPSIQVYSIAMPAQLLGGVILLAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LIQVMTGVWQERVADLLVALPGTGGSPPHH
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7814323; 11259647 [H]