| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
Click here to switch to the map view.
The map label for this gene is 162147421
Identifier: 162147421
GI number: 162147421
Start: 1651687
End: 1652586
Strand: Direct
Name: 162147421
Synonym: GDI_1637
Alternate gene names: NA
Gene position: 1651687-1652586 (Clockwise)
Preceding gene: 162147420
Following gene: 162147422
Centisome position: 41.88
GC content: 60.89
Gene sequence:
>900_bases ATGTCATCCGAGAACGCCATTCACATTGCCATCGAACTCAGCGTTTCCTCCTGGCTTGTCGCGGTAAAGACTATCTCGGG AGCCACGAAATCCCGATTGCATCGCCTCGAAGGTGGAGACGCCTCAGGGCTGCTGAAATTGATCGCGGAGCTTCAAACGC GCGCGTCGACCCAGCCGGGTGATGTCGCGGAGGTGTCATGCTGTTTCGAGGCCGGCCGCGATGGCTTCTGGCTGTATCGT TTGCTGACAGCGCACGGCATCGCCGCGTATGTGCTTGAGCCCACGAGCATTCTGGTCAATCGTCGCGCACGTCGGGCCAA GACGGACCGTCTCGACGCGGAAGGCATGCTGCGTGTTCTTGCGGCATGGCTTAATGGTGATCGCCAGATATGCAGCATGG TGCGTGTGCCGACGCCCGACGAGGAGGATGCCAAACGTACACACCGCGAACGCGAACACCTTGTTCAGGAAAGGCTGCGT ATCGAAAACAGAATAGAGGCGCTGCTGTTTACCCAGGGCATCCGGGGTAGACCGTCGTTACGGTCCTGGGAACGCGACGT CGCCGCGTTGCGCACGGGCGACGGGCGGGAACTGCCGCCGTTCCTTCGTGCTGAACTCGACCGCCTGCGTCGTCGGCTTC TCCTGGCGTTGGAACTGATCCGAGAACTGGAAACTGAACGGGCCAAGACACTGGACGCCGCAGCGATGGATGACCGTGTG ACTCAAAAGATCGTCTCGCTGAAACAGCACGGCCAGCGCTTGCGGATCGCGTCCAGGATCATCTGCGCTCCGGCGCTGTC GGAGATGTCCCCCGGCGTCAGGTTGACCATCAGCAGGCGTCCGTCCGTATCCACGGCGATATGCCGCTTGCGCCCGACAA TCTTCTTTCCAGCGTCGTAA
Upstream 100 bases:
>100_bases CCGATCGAGATCTGGTTCCAGATGCTATGAGGGCAGACACCGCCGGCAAGAAAGGCTCAATCTCAAGCGTGTCAGCACCA ATGACGAGGGAGTTCCTGCC
Downstream 100 bases:
>100_bases CCTCTTGTTTTCGCGTGCGGCGCCTTGATGCTCTGGCTGTCGATCACTCCGGCCGAAGGGCTGGCTTCACGGCCCGAGCG CTCCCGGTCAAGCATCAGTT
Product: tranposase protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MSSENAIHIAIELSVSSWLVAVKTISGATKSRLHRLEGGDASGLLKLIAELQTRASTQPGDVAEVSCCFEAGRDGFWLYR LLTAHGIAAYVLEPTSILVNRRARRAKTDRLDAEGMLRVLAAWLNGDRQICSMVRVPTPDEEDAKRTHREREHLVQERLR IENRIEALLFTQGIRGRPSLRSWERDVAALRTGDGRELPPFLRAELDRLRRRLLLALELIRELETERAKTLDAAAMDDRV TQKIVSLKQHGQRLRIASRIICAPALSEMSPGVRLTISRRPSVSTAICRLRPTIFFPAS
Sequences:
>Translated_299_residues MSSENAIHIAIELSVSSWLVAVKTISGATKSRLHRLEGGDASGLLKLIAELQTRASTQPGDVAEVSCCFEAGRDGFWLYR LLTAHGIAAYVLEPTSILVNRRARRAKTDRLDAEGMLRVLAAWLNGDRQICSMVRVPTPDEEDAKRTHREREHLVQERLR IENRIEALLFTQGIRGRPSLRSWERDVAALRTGDGRELPPFLRAELDRLRRRLLLALELIRELETERAKTLDAAAMDDRV TQKIVSLKQHGQRLRIASRIICAPALSEMSPGVRLTISRRPSVSTAICRLRPTIFFPAS >Mature_298_residues SSENAIHIAIELSVSSWLVAVKTISGATKSRLHRLEGGDASGLLKLIAELQTRASTQPGDVAEVSCCFEAGRDGFWLYRL LTAHGIAAYVLEPTSILVNRRARRAKTDRLDAEGMLRVLAAWLNGDRQICSMVRVPTPDEEDAKRTHREREHLVQERLRI ENRIEALLFTQGIRGRPSLRSWERDVAALRTGDGRELPPFLRAELDRLRRRLLLALELIRELETERAKTLDAAAMDDRVT QKIVSLKQHGQRLRIASRIICAPALSEMSPGVRLTISRRPSVSTAICRLRPTIFFPAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 20 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 33595; Mature: 33464
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSENAIHIAIELSVSSWLVAVKTISGATKSRLHRLEGGDASGLLKLIAELQTRASTQPG CCCCCEEEEEEEEEHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC DVAEVSCCFEAGRDGFWLYRLLTAHGIAAYVLEPTSILVNRRARRAKTDRLDAEGMLRVL CHHHHHHHHHCCCCHHHHHHHHHHHCHHHEEECHHHHHHHHHHHHHHHHCCCHHHHHHHH AAWLNGDRQICSMVRVPTPDEEDAKRTHREREHLVQERLRIENRIEALLFTQGIRGRPSL HHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH RSWERDVAALRTGDGRELPPFLRAELDRLRRRLLLALELIRELETERAKTLDAAAMDDRV HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQKIVSLKQHGQRLRIASRIICAPALSEMSPGVRLTISRRPSVSTAICRLRPTIFFPAS HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCEEECCC >Mature Secondary Structure SSENAIHIAIELSVSSWLVAVKTISGATKSRLHRLEGGDASGLLKLIAELQTRASTQPG CCCCEEEEEEEEEHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC DVAEVSCCFEAGRDGFWLYRLLTAHGIAAYVLEPTSILVNRRARRAKTDRLDAEGMLRVL CHHHHHHHHHCCCCHHHHHHHHHHHCHHHEEECHHHHHHHHHHHHHHHHCCCHHHHHHHH AAWLNGDRQICSMVRVPTPDEEDAKRTHREREHLVQERLRIENRIEALLFTQGIRGRPSL HHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH RSWERDVAALRTGDGRELPPFLRAELDRLRRRLLLALELIRELETERAKTLDAAAMDDRV HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQKIVSLKQHGQRLRIASRIICAPALSEMSPGVRLTISRRPSVSTAICRLRPTIFFPAS HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]