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The map label for this gene is 162147419

Identifier: 162147419

GI number: 162147419

Start: 1648043

End: 1649284

Strand: Reverse

Name: 162147419

Synonym: GDI_1634

Alternate gene names: NA

Gene position: 1649284-1648043 (Counterclockwise)

Preceding gene: 162147423

Following gene: 162147415

Centisome position: 41.82

GC content: 65.06

Gene sequence:

>1242_bases
TTGTTTCACTTCGTGTACGCTCGCGGCGCGGCGATAAAAAAGATCGCGCGGGGGGTGCTTGTCTTCACCCTTTCGCGACG
ATCGAGTGGCATGTTCAAGACGTTCACGTGGATACTGTCCTGTCCCATCTGGGCGCTTCAGCTTTTTACCGGCGCGAAAT
CATTCCGTGACAATCCGCTGATCGGCAGCCGGGCGCTGAATGAACGGGGGCTGCATGTCCTGCGCCAGGCCATGGCGCAT
CGGGCCACCGCCTGGCGGCGGCGGCGGCTGGGGCGCGGCGTTCCCGCTCCTCTGGCGGCCGCGTTCGCGCGGGATGGTTT
CGTCGTCGTCCCGGATTTCCTGCCGGCCGAAGCATTCAGCCAGCTTCTTGATGACGTCACGCGCTATCGCGGGCCGGCGC
GCGAGACCATACAGGGCGACACGGTCACCCGCCGCATCGCGCTCGATCCCAGGGTGCTGGCCGGGATGCCCGGCATGCGG
CGCCTGCTGGACAGGCGGCTGCTGGGCAAGCTGACACGGCTGGCCGGTGGCCGCGATTGCGAACCGCTTTATTATATCCA
GACCATTCTTCCGCATGCCGTCACGGGCGACCCCGACCCGCAGCTTCAGCTTCATGCCGATACCTTCCATCCGACGGTCA
AGGCGTGGTTCACCCTGACCGACGTCGCGGAAGACAGCAGCCCGTTCATCTATGTCCCTGGTTCGCACATCATCACCCCA
GCGCGCCGGGCCTGGGAAAAACGAATGAGCATCGAGGCATCCGGATCGGAAAACCGTCTGACCGGCCGGGGATCTTTCCG
TGTCGATGAAGACACCATTTCCGCCATGGGCTACCCGCCGCCGCGCTCCTTTCCGCTGCCGGCGAATACGCTGATCGTCG
CGGATACGGGTGGCTTTCATGCGCGCGGGGCCGCCCGGGACGCCGGTATGCGGGTCGAGGTCTGGGCGTACGAACGCGGG
AATCCGTTTTGTGCCCCGCCGGTCGATCTGTGGCGCATTCCGGCCCTGGGCCGGTGGCGCGTGCCTGTGATGTGGGCTTT
TGGCGACTGGCTGGAGGAAAGCGGCCTGGGGCGGCAGGTCTGGCGCAGGCGCGGCACTGTCGGCGCGTTCGACCGCGACG
TTGCCGGTCATGCGGCGGCCAAGGTTCGGCAGGACATGTCGGGGTGGCCTGGGCGGGTCAGCGCTGGTTTGGTGCGGAAG
GGTCTTCTTTTTCTGAAGAAAAAGAAGCAAAAAGACTTTTGA

Upstream 100 bases:

>100_bases
CATAAACGCCGTCGTCGCCATCACTCATCACTACGGCAGCGCCCAATCCGACAGCCTGCTAGAGCATTCAGAATGCTGGA
AAAGTCCTGGTCGGCGTGTA

Downstream 100 bases:

>100_bases
TCTGTTTCGGGACATCGTACGCGCCCGGCACAATGCCCCTGAACAGATCAAAAGTTTTTTGGTTCTTTTTTTCAAAAAAG
AACTTAAAAACTGGCCTTCA

Product: deoxygenase protein

Products: NA

Alternate protein names: Deoxygenase Protein; Phytanoyl-CoA Dioxygenase Family Protein

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MFHFVYARGAAIKKIARGVLVFTLSRRSSGMFKTFTWILSCPIWALQLFTGAKSFRDNPLIGSRALNERGLHVLRQAMAH
RATAWRRRRLGRGVPAPLAAAFARDGFVVVPDFLPAEAFSQLLDDVTRYRGPARETIQGDTVTRRIALDPRVLAGMPGMR
RLLDRRLLGKLTRLAGGRDCEPLYYIQTILPHAVTGDPDPQLQLHADTFHPTVKAWFTLTDVAEDSSPFIYVPGSHIITP
ARRAWEKRMSIEASGSENRLTGRGSFRVDEDTISAMGYPPPRSFPLPANTLIVADTGGFHARGAARDAGMRVEVWAYERG
NPFCAPPVDLWRIPALGRWRVPVMWAFGDWLEESGLGRQVWRRRGTVGAFDRDVAGHAAAKVRQDMSGWPGRVSAGLVRK
GLLFLKKKKQKDF

Sequences:

>Translated_413_residues
MFHFVYARGAAIKKIARGVLVFTLSRRSSGMFKTFTWILSCPIWALQLFTGAKSFRDNPLIGSRALNERGLHVLRQAMAH
RATAWRRRRLGRGVPAPLAAAFARDGFVVVPDFLPAEAFSQLLDDVTRYRGPARETIQGDTVTRRIALDPRVLAGMPGMR
RLLDRRLLGKLTRLAGGRDCEPLYYIQTILPHAVTGDPDPQLQLHADTFHPTVKAWFTLTDVAEDSSPFIYVPGSHIITP
ARRAWEKRMSIEASGSENRLTGRGSFRVDEDTISAMGYPPPRSFPLPANTLIVADTGGFHARGAARDAGMRVEVWAYERG
NPFCAPPVDLWRIPALGRWRVPVMWAFGDWLEESGLGRQVWRRRGTVGAFDRDVAGHAAAKVRQDMSGWPGRVSAGLVRK
GLLFLKKKKQKDF
>Mature_413_residues
MFHFVYARGAAIKKIARGVLVFTLSRRSSGMFKTFTWILSCPIWALQLFTGAKSFRDNPLIGSRALNERGLHVLRQAMAH
RATAWRRRRLGRGVPAPLAAAFARDGFVVVPDFLPAEAFSQLLDDVTRYRGPARETIQGDTVTRRIALDPRVLAGMPGMR
RLLDRRLLGKLTRLAGGRDCEPLYYIQTILPHAVTGDPDPQLQLHADTFHPTVKAWFTLTDVAEDSSPFIYVPGSHIITP
ARRAWEKRMSIEASGSENRLTGRGSFRVDEDTISAMGYPPPRSFPLPANTLIVADTGGFHARGAARDAGMRVEVWAYERG
NPFCAPPVDLWRIPALGRWRVPVMWAFGDWLEESGLGRQVWRRRGTVGAFDRDVAGHAAAKVRQDMSGWPGRVSAGLVRK
GLLFLKKKKQKDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46151; Mature: 46151

Theoretical pI: Translated: 11.44; Mature: 11.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHFVYARGAAIKKIARGVLVFTLSRRSSGMFKTFTWILSCPIWALQLFTGAKSFRDNPL
CEEEEEECCHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IGSRALNERGLHVLRQAMAHRATAWRRRRLGRGVPAPLAAAFARDGFVVVPDFLPAEAFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCCCCHHHHH
QLLDDVTRYRGPARETIQGDTVTRRIALDPRVLAGMPGMRRLLDRRLLGKLTRLAGGRDC
HHHHHHHHHCCCCHHHCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC
EPLYYIQTILPHAVTGDPDPQLQLHADTFHPTVKAWFTLTDVAEDSSPFIYVPGSHIITP
CHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHEEEEHHCCCCCCEEEECCCCEECH
ARRAWEKRMSIEASGSENRLTGRGSFRVDEDTISAMGYPPPRSFPLPANTLIVADTGGFH
HHHHHHHHCCEECCCCCCCEECCCCCEECHHHHHHCCCCCCCCCCCCCCEEEEEECCCCC
ARGAARDAGMRVEVWAYERGNPFCAPPVDLWRIPALGRWRVPVMWAFGDWLEESGLGRQV
CCCCCCCCCCEEEEEEEECCCCCCCCCHHHHCCCCCCCCCCEEEEHHHHHHHHCCCCHHH
WRRRGTVGAFDRDVAGHAAAKVRQDMSGWPGRVSAGLVRKGLLFLKKKKQKDF
HHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFHFVYARGAAIKKIARGVLVFTLSRRSSGMFKTFTWILSCPIWALQLFTGAKSFRDNPL
CEEEEEECCHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IGSRALNERGLHVLRQAMAHRATAWRRRRLGRGVPAPLAAAFARDGFVVVPDFLPAEAFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCCCCHHHHH
QLLDDVTRYRGPARETIQGDTVTRRIALDPRVLAGMPGMRRLLDRRLLGKLTRLAGGRDC
HHHHHHHHHCCCCHHHCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC
EPLYYIQTILPHAVTGDPDPQLQLHADTFHPTVKAWFTLTDVAEDSSPFIYVPGSHIITP
CHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHEEEEHHCCCCCCEEEECCCCEECH
ARRAWEKRMSIEASGSENRLTGRGSFRVDEDTISAMGYPPPRSFPLPANTLIVADTGGFH
HHHHHHHHCCEECCCCCCCEECCCCCEECHHHHHHCCCCCCCCCCCCCCEEEEEECCCCC
ARGAARDAGMRVEVWAYERGNPFCAPPVDLWRIPALGRWRVPVMWAFGDWLEESGLGRQV
CCCCCCCCCCEEEEEEEECCCCCCCCCHHHHCCCCCCCCCCEEEEHHHHHHHHCCCCHHH
WRRRGTVGAFDRDVAGHAAAKVRQDMSGWPGRVSAGLVRKGLLFLKKKKQKDF
HHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA