| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is tyrA [H]
Identifier: 162147412
GI number: 162147412
Start: 1638272
End: 1639180
Strand: Direct
Name: tyrA [H]
Synonym: GDI_1627
Alternate gene names: 162147412
Gene position: 1638272-1639180 (Clockwise)
Preceding gene: 162147411
Following gene: 162147416
Centisome position: 41.54
GC content: 70.74
Gene sequence:
>909_bases ATGACCGATCCCTCGCCCGCCGCGCCGCAGCCCCTGTTCCGCACGCTTGCCGTCATCGGGCCGGGCCTGATCGGATCGTC CATCCTGCGCCGCGCGCGGCAGGACGGCACGATCGCGGCCGAACTGGTGGCGTGCGACGTCGAGCCCGACGTCTGCCGCC GGGTGCGCGACCTGGACCTGGCCGACCGGGTGGAGCAGGACGCGCTGCGTGCGGTGGCGGATGCCGACTGCGTCATCCTG TGCGTGCCGGTGGGCGCGATCGCCACCGTGGGCGCCATGGTGCTGCCGGCCATGAAGCCCGGCGCGATCCTCAGCGAGGT CGGATCGACCAAGCAGTCGATCATCGGCGCCATCGCCCCCGCACTGCGCGCCGACATCGCGTTCGTGCCGACCCATCCGA TGGCGGGCACGGAATATTCGGGCCCCGACGCGGGATTCGCCACCCTGTTCGACGACCGGTGGTGCCTGCTGACGCCGCTG GAGGACACGGACCCGGCCGCGATCGCGACCATCGAGACGCTGTGGCACCGCATGGGCGCGCGCACTCGGATCATTGACCC GGCCCATCACGACCGGGTCTGCGCCATCGTCAGCCACCTGCCGCACCTGCTGGCCTTCACCATCTGCGGCACCGCCGACG ACCTGGCCGACGAAACGCGGTCCGAGGTCCTGGATTTCGCGGCGTCGGGCTTTCGCGACTTTACCCGCATCGCCGCGTCC GACCCGGTGATGTGGCGCGACATCTTCCTGAACAACCGCGAGGCGCTGCTGGAAATGCTGGCCCGCTTCATGGAGGACGC CCAGGCCATGGCCCGGGCGATCCGATGGGGCGACGAGGCGTTCATCGTGGACCGGATCGAACGCGGCCGCCACATCCGGC GCAGCCTGCTGGAAAACCGCCAGGCCTGA
Upstream 100 bases:
>100_bases TGGGACCGGCCACGGCGCTGGCCCAGACCAAGGCATTGGCCCAGGACCCGGACGGCGGTGCCTATGCCGCGTCCGAACGG TCGCGCTGACCGGATACGCC
Downstream 100 bases:
>100_bases AACGAACAGGGGTCAAGGGGTCCGCGACCCCTTGCGGGTTCGGGCAGAGCCCGACCTTCCTCCCCCCTCAGGCGTCCGGC GCGTAGGTCGGGCTGTAGGT
Product: prephenate dehydrogenase
Products: NA
Alternate protein names: Arogenate dehydrogenase; ADH; Cyclohexadienyl dehydrogenase; Prephenate dehydrogenase; PDH [H]
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MTDPSPAAPQPLFRTLAVIGPGLIGSSILRRARQDGTIAAELVACDVEPDVCRRVRDLDLADRVEQDALRAVADADCVIL CVPVGAIATVGAMVLPAMKPGAILSEVGSTKQSIIGAIAPALRADIAFVPTHPMAGTEYSGPDAGFATLFDDRWCLLTPL EDTDPAAIATIETLWHRMGARTRIIDPAHHDRVCAIVSHLPHLLAFTICGTADDLADETRSEVLDFAASGFRDFTRIAAS DPVMWRDIFLNNREALLEMLARFMEDAQAMARAIRWGDEAFIVDRIERGRHIRRSLLENRQA
Sequences:
>Translated_302_residues MTDPSPAAPQPLFRTLAVIGPGLIGSSILRRARQDGTIAAELVACDVEPDVCRRVRDLDLADRVEQDALRAVADADCVIL CVPVGAIATVGAMVLPAMKPGAILSEVGSTKQSIIGAIAPALRADIAFVPTHPMAGTEYSGPDAGFATLFDDRWCLLTPL EDTDPAAIATIETLWHRMGARTRIIDPAHHDRVCAIVSHLPHLLAFTICGTADDLADETRSEVLDFAASGFRDFTRIAAS DPVMWRDIFLNNREALLEMLARFMEDAQAMARAIRWGDEAFIVDRIERGRHIRRSLLENRQA >Mature_301_residues TDPSPAAPQPLFRTLAVIGPGLIGSSILRRARQDGTIAAELVACDVEPDVCRRVRDLDLADRVEQDALRAVADADCVILC VPVGAIATVGAMVLPAMKPGAILSEVGSTKQSIIGAIAPALRADIAFVPTHPMAGTEYSGPDAGFATLFDDRWCLLTPLE DTDPAAIATIETLWHRMGARTRIIDPAHHDRVCAIVSHLPHLLAFTICGTADDLADETRSEVLDFAASGFRDFTRIAASD PVMWRDIFLNNREALLEMLARFMEDAQAMARAIRWGDEAFIVDRIERGRHIRRSLLENRQA
Specific function: Is competent to function as either prephenate dehydrogenase or as arogenate dehydrogenase [H]
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF02153 PDH [H]
EC number: =1.3.1.43; =1.3.1.12 [H]
Molecular weight: Translated: 32870; Mature: 32739
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPSPAAPQPLFRTLAVIGPGLIGSSILRRARQDGTIAAELVACDVEPDVCRRVRDLDL CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEHEEECCCHHHHHHHHCCCH ADRVEQDALRAVADADCVILCVPVGAIATVGAMVLPAMKPGAILSEVGSTKQSIIGAIAP HHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHH ALRADIAFVPTHPMAGTEYSGPDAGFATLFDDRWCLLTPLEDTDPAAIATIETLWHRMGA HHHHCEEEECCCCCCCCCCCCCCCCHHHEECCCEEEEECCCCCCCHHHHHHHHHHHHHCC RTRIIDPAHHDRVCAIVSHLPHLLAFTICGTADDLADETRSEVLDFAASGFRDFTRIAAS CCEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DPVMWRDIFLNNREALLEMLARFMEDAQAMARAIRWGDEAFIVDRIERGRHIRRSLLENR CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC QA CC >Mature Secondary Structure TDPSPAAPQPLFRTLAVIGPGLIGSSILRRARQDGTIAAELVACDVEPDVCRRVRDLDL CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEHEEECCCHHHHHHHHCCCH ADRVEQDALRAVADADCVILCVPVGAIATVGAMVLPAMKPGAILSEVGSTKQSIIGAIAP HHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHH ALRADIAFVPTHPMAGTEYSGPDAGFATLFDDRWCLLTPLEDTDPAAIATIETLWHRMGA HHHHCEEEECCCCCCCCCCCCCCCCHHHEECCCEEEEECCCCCCCHHHHHHHHHHHHHCC RTRIIDPAHHDRVCAIVSHLPHLLAFTICGTADDLADETRSEVLDFAASGFRDFTRIAAS CCEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DPVMWRDIFLNNREALLEMLARFMEDAQAMARAIRWGDEAFIVDRIERGRHIRRSLLENR CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC QA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7916685 [H]