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The map label for this gene is oprB [H]

Identifier: 162147401

GI number: 162147401

Start: 1622974

End: 1624434

Strand: Direct

Name: oprB [H]

Synonym: GDI_1616

Alternate gene names: 162147401

Gene position: 1622974-1624434 (Clockwise)

Preceding gene: 162147400

Following gene: 162147411

Centisome position: 41.15

GC content: 62.49

Gene sequence:

>1461_bases
ATGCCTGTCATTACGTTACCTCTTTCGCCTCGCTGCCGCGCGTATGTCCTTGCCGTCCTGACCGCCATCGCTTTCTGGGG
GACCGGCCTGCCATCCGCGCTCGCCCAGTCGGAGACATCCAAGAGCGCCTTTACCCCTACCGATGAAGCGGTGAGTTTTC
CCCTGGGCGGCGCGGGACAGATCCCGATCGGTCCACTGGTCACGTCGCTCTATGGCAACCCGCATCTGTTGGGCGACTGG
GGCGGCATACAGCCCTGGCTGATGAAGCGCGGCATCTTCGTCAATGTCGGGGTGAACGAGGAATTCATGGGCAACATAAC
CGGCGGCCGGACGCGCGACCACGTCCTGGCCGGACAGGTCGCGGGCGAAGTGGATATCGACTGGCGGAAGCTGGCAGGCA
TCCCCGATTTCTGGACCCACATGCTGGTCGTCAACGGGCATGGCAACAATTTCAGCCACACGCTGGGTGATTACGTCGCC
AATCCGGAACAGATCTATGGCGCGCGCGGCAACGTGGTCGCGCACCTTGTCTCCCTCTACGCCGACAAATCGTTCCTTCA
TGACAGGATCATTCTCTCGTTCGGGTGGATGCCGACCGGCAGCTTCTTCAATTTCGACTATCTGGCCTGTTCGTTCATGA
ATGTTGCGATCTGCGGAAATTTCGCACCGGGCAAATATGTGCCCGGCGGGCGCGACTGGCCGTCGGGCAACCTGGGCGGC
ATCGTGCGTTTCCGGCCGACGGAGCGGACCTATATCATGGCCGGCGCCTTCGGCGTGACGCAGGCCGGCTATAATGGCGG
CATATCCGGCTGGTCCTGGGGACAGAAAATGAGCGGGGTCTCGACGCAGGCGGAACTCGGCTGGTCCCCTTCGTTCGGTC
GCGACGACCTGCTGGGCCATTACAAGATCGGCGCCTATTACGACAATTCCCGCTATCCGAACCTGTATGAGGACATCAAC
GGAAATTCGTTCCAGGCCACCGGACTGCCGCGGCGGTACGAATCCGGCCAATGGTCGTCATGGCTGATGTTCGACCAGAT
GCTGGTGCGGAACGGCAAGGGGGTGGCCAACGGCCTGATCGCGATCGGCGGCCTCGGCTACGCGCAGGGCAATATCGTCG
CCATGCGCGACCACGAATGGATCGGCCTGCTGGAAAGCGGCACCCCATGGAACCGCCCGATGGACCAGGCCGGCATCATG
TTCCAGAACATCGACATGAGCCACACGCTGCGCCTGCAACAGCAATCCTCCGCCGCCCTCGGCGTGCCCTTCCTCTCGAA
TCAGTGGGGCACAGTCTACGGCGTGCAGAACTGGGAACGGGTCTACGAAGCCTTCTACAGCGTCCACCTGCTGCGCGCGA
CCTCGCTCCAGTTCGACTTCCAGTACCTCCAGCACCCCGGCGCTACCACCACCTTCGGCGGCGCGGCAGTCGTGGGCGGC
CAGTTCACGACCAACTTCTGA

Upstream 100 bases:

>100_bases
GCCATCGTTCCGCCGATATGTATTTTTATTATTTCTATCTATATTCCTCGTTTTCATAAGAACTAACAACAAACAATAAT
CAAGGAACCATTTTCGGACT

Downstream 100 bases:

>100_bases
AACCGCGCCCGTTCCCGATCACCGTCCCATCCCTCCGGAGGGCAATCAAAAGCGTCACCGCCCGACTGGAGGTCCGGCTT
TCCCGTGCCGACCTCCGATA

Product: porin OprB

Products: NA

Alternate protein names: Glucose porin; Outer membrane protein D1 [H]

Number of amino acids: Translated: 486; Mature: 485

Protein sequence:

>486_residues
MPVITLPLSPRCRAYVLAVLTAIAFWGTGLPSALAQSETSKSAFTPTDEAVSFPLGGAGQIPIGPLVTSLYGNPHLLGDW
GGIQPWLMKRGIFVNVGVNEEFMGNITGGRTRDHVLAGQVAGEVDIDWRKLAGIPDFWTHMLVVNGHGNNFSHTLGDYVA
NPEQIYGARGNVVAHLVSLYADKSFLHDRIILSFGWMPTGSFFNFDYLACSFMNVAICGNFAPGKYVPGGRDWPSGNLGG
IVRFRPTERTYIMAGAFGVTQAGYNGGISGWSWGQKMSGVSTQAELGWSPSFGRDDLLGHYKIGAYYDNSRYPNLYEDIN
GNSFQATGLPRRYESGQWSSWLMFDQMLVRNGKGVANGLIAIGGLGYAQGNIVAMRDHEWIGLLESGTPWNRPMDQAGIM
FQNIDMSHTLRLQQQSSAALGVPFLSNQWGTVYGVQNWERVYEAFYSVHLLRATSLQFDFQYLQHPGATTTFGGAAVVGG
QFTTNF

Sequences:

>Translated_486_residues
MPVITLPLSPRCRAYVLAVLTAIAFWGTGLPSALAQSETSKSAFTPTDEAVSFPLGGAGQIPIGPLVTSLYGNPHLLGDW
GGIQPWLMKRGIFVNVGVNEEFMGNITGGRTRDHVLAGQVAGEVDIDWRKLAGIPDFWTHMLVVNGHGNNFSHTLGDYVA
NPEQIYGARGNVVAHLVSLYADKSFLHDRIILSFGWMPTGSFFNFDYLACSFMNVAICGNFAPGKYVPGGRDWPSGNLGG
IVRFRPTERTYIMAGAFGVTQAGYNGGISGWSWGQKMSGVSTQAELGWSPSFGRDDLLGHYKIGAYYDNSRYPNLYEDIN
GNSFQATGLPRRYESGQWSSWLMFDQMLVRNGKGVANGLIAIGGLGYAQGNIVAMRDHEWIGLLESGTPWNRPMDQAGIM
FQNIDMSHTLRLQQQSSAALGVPFLSNQWGTVYGVQNWERVYEAFYSVHLLRATSLQFDFQYLQHPGATTTFGGAAVVGG
QFTTNF
>Mature_485_residues
PVITLPLSPRCRAYVLAVLTAIAFWGTGLPSALAQSETSKSAFTPTDEAVSFPLGGAGQIPIGPLVTSLYGNPHLLGDWG
GIQPWLMKRGIFVNVGVNEEFMGNITGGRTRDHVLAGQVAGEVDIDWRKLAGIPDFWTHMLVVNGHGNNFSHTLGDYVAN
PEQIYGARGNVVAHLVSLYADKSFLHDRIILSFGWMPTGSFFNFDYLACSFMNVAICGNFAPGKYVPGGRDWPSGNLGGI
VRFRPTERTYIMAGAFGVTQAGYNGGISGWSWGQKMSGVSTQAELGWSPSFGRDDLLGHYKIGAYYDNSRYPNLYEDING
NSFQATGLPRRYESGQWSSWLMFDQMLVRNGKGVANGLIAIGGLGYAQGNIVAMRDHEWIGLLESGTPWNRPMDQAGIMF
QNIDMSHTLRLQQQSSAALGVPFLSNQWGTVYGVQNWERVYEAFYSVHLLRATSLQFDFQYLQHPGATTTFGGAAVVGGQ
FTTNF

Specific function: Substrate-selective channel for a variety of different sugars. Could potentially facilitate the diffusion of diverse compounds, dependent on the presence of a hydroxyl group, but is presumably restricted to carbohydrates. Involved in the transport of gluc

COG id: COG3659

COG function: function code M; Carbohydrate-selective porin

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oprB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049 [H]

Pfam domain/function: PF04966 OprB [H]

EC number: NA

Molecular weight: Translated: 53124; Mature: 52992

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVITLPLSPRCRAYVLAVLTAIAFWGTGLPSALAQSETSKSAFTPTDEAVSFPLGGAGQ
CCEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCHHEECCCCCCCC
IPIGPLVTSLYGNPHLLGDWGGIQPWLMKRGIFVNVGVNEEFMGNITGGRTRDHVLAGQV
CCHHHHHHHHCCCCEEEECCCCCCHHHHHCCEEEEECCCHHHHCCCCCCCCCCEEEECCC
AGEVDIDWRKLAGIPDFWTHMLVVNGHGNNFSHTLGDYVANPEQIYGARGNVVAHLVSLY
CCCCCCCHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHCCHHHHHCCCCHHHHHHHHHH
ADKSFLHDRIILSFGWMPTGSFFNFDYLACSFMNVAICGNFAPGKYVPGGRDWPSGNLGG
HCHHHHHCEEEEEECCCCCCCCCCHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCC
IVRFRPTERTYIMAGAFGVTQAGYNGGISGWSWGQKMSGVSTQAELGWSPSFGRDDLLGH
EEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCHHHCCCCCCCCCCCCCEE
YKIGAYYDNSRYPNLYEDINGNSFQATGLPRRYESGQWSSWLMFDQMLVRNGKGVANGLI
EEEEEEECCCCCCCHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCEE
AIGGLGYAQGNIVAMRDHEWIGLLESGTPWNRPMDQAGIMFQNIDMSHTLRLQQQSSAAL
EEECCCCCCCCEEEEECCCEEEEEECCCCCCCCCHHHCCEEEECCCHHEEEEECCCCCEE
GVPFLSNQWGTVYGVQNWERVYEAFYSVHLLRATSLQFDFQYLQHPGATTTFGGAAVVGG
CCCEECCCCCEEEECHHHHHHHHHHHHHHHEEHHCHHEEHHHHHCCCCCCCCCCEEEECC
QFTTNF
EEECCC
>Mature Secondary Structure 
PVITLPLSPRCRAYVLAVLTAIAFWGTGLPSALAQSETSKSAFTPTDEAVSFPLGGAGQ
CEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCHHEECCCCCCCC
IPIGPLVTSLYGNPHLLGDWGGIQPWLMKRGIFVNVGVNEEFMGNITGGRTRDHVLAGQV
CCHHHHHHHHCCCCEEEECCCCCCHHHHHCCEEEEECCCHHHHCCCCCCCCCCEEEECCC
AGEVDIDWRKLAGIPDFWTHMLVVNGHGNNFSHTLGDYVANPEQIYGARGNVVAHLVSLY
CCCCCCCHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHCCHHHHHCCCCHHHHHHHHHH
ADKSFLHDRIILSFGWMPTGSFFNFDYLACSFMNVAICGNFAPGKYVPGGRDWPSGNLGG
HCHHHHHCEEEEEECCCCCCCCCCHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCC
IVRFRPTERTYIMAGAFGVTQAGYNGGISGWSWGQKMSGVSTQAELGWSPSFGRDDLLGH
EEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCHHHCCCCCCCCCCCCCEE
YKIGAYYDNSRYPNLYEDINGNSFQATGLPRRYESGQWSSWLMFDQMLVRNGKGVANGLI
EEEEEEECCCCCCCHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCEE
AIGGLGYAQGNIVAMRDHEWIGLLESGTPWNRPMDQAGIMFQNIDMSHTLRLQQQSSAAL
EEECCCCCCCCEEEEECCCEEEEEECCCCCCCCCHHHCCEEEECCCHHEEEEECCCCCEE
GVPFLSNQWGTVYGVQNWERVYEAFYSVHLLRATSLQFDFQYLQHPGATTTFGGAAVVGG
CCCEECCCCCEEEECHHHHHHHHHHHHHHHEEHHCHHEEHHHHHCCCCCCCCCCEEEECC
QFTTNF
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8125108; 10984043; 2450582; 8132494; 7768797 [H]