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The map label for this gene is ycgN [C]

Identifier: 162147380

GI number: 162147380

Start: 1598523

End: 1599005

Strand: Reverse

Name: ycgN [C]

Synonym: GDI_1595

Alternate gene names: 162147380

Gene position: 1599005-1598523 (Counterclockwise)

Preceding gene: 162147381

Following gene: 162147379

Centisome position: 40.54

GC content: 70.6

Gene sequence:

>483_bases
ATGACCGATACGCCCCCTTTCTGGCAAGTCCGCAGCCTGGACGAGATGACGACCGAGGAGTGGGAATCGCTCTGCGACGG
GTGCGGGCGCTGCTGCCTGCATAAACTGCGCGAGGATGTCACGGATCAGGTCCTGTACACCGACGTCGCCTGCCGCCTGC
TGGACCTGGAAAGCTGCCGCTGTTCCGATTACGCGCAGCGCCGGCGCAAGGTGCCCGACTGCGTGCAGCTGACCCCGGCG
GCCCTGGCCGATATCGACTGGCTGCCGCCCTCCTGCGCCTATCGCCTGCTGGCCGAGGGGCAGACGCTGGCCTGGTGGCA
CCCGCTGGTCTCCGGCTCGCCCGATACGGTGCACGAGGCCGGGATTTCGGTGCGCGGCCGCGCGGTCAGCGAACGCCGGG
CCGGCCCGCTGGAACATCACATCGCCGACTGGCCCGGCACGATGCCGCGTCCGCGCCGCCCGCGTATCCGCCGCCCGGCA
TGA

Upstream 100 bases:

>100_bases
GCGGCCGGCGGGGCGGTGCTGGCCGGTGTGTCTGGCGGGCGATAGGGCCGGCGGTCGTTTTCCTTCTCAGTCCGTGCCGG
ATTCAGTATGAGGTTCGGCC

Downstream 100 bases:

>100_bases
TGGCCGGCCTCTCCAGCCCGGAGCAGGTGGGGGAGGAGAATATCCGGCTGGCGGGGCGCGACATTCCCGTCCGCTGGCGC
CGGTCCGCCCGCGCGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MTDTPPFWQVRSLDEMTTEEWESLCDGCGRCCLHKLREDVTDQVLYTDVACRLLDLESCRCSDYAQRRRKVPDCVQLTPA
ALADIDWLPPSCAYRLLAEGQTLAWWHPLVSGSPDTVHEAGISVRGRAVSERRAGPLEHHIADWPGTMPRPRRPRIRRPA

Sequences:

>Translated_160_residues
MTDTPPFWQVRSLDEMTTEEWESLCDGCGRCCLHKLREDVTDQVLYTDVACRLLDLESCRCSDYAQRRRKVPDCVQLTPA
ALADIDWLPPSCAYRLLAEGQTLAWWHPLVSGSPDTVHEAGISVRGRAVSERRAGPLEHHIADWPGTMPRPRRPRIRRPA
>Mature_159_residues
TDTPPFWQVRSLDEMTTEEWESLCDGCGRCCLHKLREDVTDQVLYTDVACRLLDLESCRCSDYAQRRRKVPDCVQLTPAA
LADIDWLPPSCAYRLLAEGQTLAWWHPLVSGSPDTVHEAGISVRGRAVSERRAGPLEHHIADWPGTMPRPRRPRIRRPA

Specific function: Unknown

COG id: COG2983

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0260 family

Homologues:

Organism=Escherichia coli, GI145693117, Length=145, Percent_Identity=51.0344827586207, Blast_Score=157, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1595_GLUDA (A9HGR3)

Other databases:

- EMBL:   CP001189
- EMBL:   AM889285
- RefSeq:   YP_001601841.1
- RefSeq:   YP_002276176.1
- GeneID:   5792035
- GeneID:   6975223
- GenomeReviews:   AM889285_GR
- GenomeReviews:   CP001189_GR
- KEGG:   gdj:Gdia_1801
- HOGENOM:   HBG490440
- OMA:   TCQCSDY
- ProtClustDB:   PRK05170
- HAMAP:   MF_00676
- InterPro:   IPR008228
- InterPro:   IPR005358
- PIRSF:   PIRSF006173

Pfam domain/function: PF03692 UPF0153

EC number: NA

Molecular weight: Translated: 18221; Mature: 18090

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
5.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTPPFWQVRSLDEMTTEEWESLCDGCGRCCLHKLREDVTDQVLYTDVACRLLDLESCR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
CSDYAQRRRKVPDCVQLTPAALADIDWLPPSCAYRLLAEGQTLAWWHPLVSGSPDTVHEA
CHHHHHHHHCCCHHHHHCHHHHHHCCCCCHHHHHHHHHCCCEEEEHHHHCCCCCCHHHHC
GISVRGRAVSERRAGPLEHHIADWPGTMPRPRRPRIRRPA
CCCCCCCHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDTPPFWQVRSLDEMTTEEWESLCDGCGRCCLHKLREDVTDQVLYTDVACRLLDLESCR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
CSDYAQRRRKVPDCVQLTPAALADIDWLPPSCAYRLLAEGQTLAWWHPLVSGSPDTVHEA
CHHHHHHHHCCCHHHHHCHHHHHHCCCCCHHHHHHHHHCCCEEEEHHHHCCCCCCHHHHC
GISVRGRAVSERRAGPLEHHIADWPGTMPRPRRPRIRRPA
CCCCCCCHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA