| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
Click here to switch to the map view.
The map label for this gene is yceI [H]
Identifier: 162147278
GI number: 162147278
Start: 1490547
End: 1491164
Strand: Reverse
Name: yceI [H]
Synonym: GDI_1483
Alternate gene names: 162147278
Gene position: 1491164-1490547 (Counterclockwise)
Preceding gene: 162147279
Following gene: 162147277
Centisome position: 37.81
GC content: 65.05
Gene sequence:
>618_bases ATGTTTCGTTCCCTTCTTTCGGCGTCCGCCGCCGCAACCGTCCTGCTCGCCGTCACGGCCGGCGCCGTCTCGGCCCAGAC CCCGGCCAAGCCCGCCGACGTGCAGGGCGGCACCTACCAGGTCGAACCCAGCCACACGCAGGTCGGCTTCTCGCTGCTGC ATTTCGGCTTCACCTATTATTCGGGCCTGTTCTCGAACGTATCGGGCACCCTGACGCTCGATCCCAAGGCGCCGTCCGGC TCGGCCCTGAACGTCACCATTCCCGTCGCGTCCGTGCAGACGACCAGCGGGAAGCTGGACGAGGAACTGAAGGGCGCGGA ATGGTTCGATGCCGCCCAATTCCCCAACGCCACCTTCACCTCGACGAAGGTCATCCCCACCGGCAAGGATCGCGCGACCG TCACGGGCAACCTGACGATCCACGGCATCACGAAGCCTGAAACGCTGAAGGTGCGCTTCATCGGCGCGGGCGTGAACCCG ATGGACAAGAAATACACCGTCGGCTTCGAGGCGACCGGCACGGTCAACCGCAGCGATTTCGGCGTGAAGAAGTATGTCCC CTATGTCGGCGACGCGGTGGACCTGCATATCGCCGGCGCGTTCGAACGCCAGGGCTGA
Upstream 100 bases:
>100_bases GCGACAACGAACGCGATGGCGCCCGCTTCCTCGGCCAGCATGTGGCGCAGATCGCCGCCAAGCTTTCCGCTTAATTCCCC GACACATTCAGGATCATACG
Downstream 100 bases:
>100_bases TCGGGTCATGCCGGCCGCCTCCGACACGGCCGGCGCCCCCGGCCGCTACAGCCTGGTCGCGATCATCCTCCATTGGGTGA TCGCGGCGGGCATCCTGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MFRSLLSASAAATVLLAVTAGAVSAQTPAKPADVQGGTYQVEPSHTQVGFSLLHFGFTYYSGLFSNVSGTLTLDPKAPSG SALNVTIPVASVQTTSGKLDEELKGAEWFDAAQFPNATFTSTKVIPTGKDRATVTGNLTIHGITKPETLKVRFIGAGVNP MDKKYTVGFEATGTVNRSDFGVKKYVPYVGDAVDLHIAGAFERQG
Sequences:
>Translated_205_residues MFRSLLSASAAATVLLAVTAGAVSAQTPAKPADVQGGTYQVEPSHTQVGFSLLHFGFTYYSGLFSNVSGTLTLDPKAPSG SALNVTIPVASVQTTSGKLDEELKGAEWFDAAQFPNATFTSTKVIPTGKDRATVTGNLTIHGITKPETLKVRFIGAGVNP MDKKYTVGFEATGTVNRSDFGVKKYVPYVGDAVDLHIAGAFERQG >Mature_205_residues MFRSLLSASAAATVLLAVTAGAVSAQTPAKPADVQGGTYQVEPSHTQVGFSLLHFGFTYYSGLFSNVSGTLTLDPKAPSG SALNVTIPVASVQTTSGKLDEELKGAEWFDAAQFPNATFTSTKVIPTGKDRATVTGNLTIHGITKPETLKVRFIGAGVNP MDKKYTVGFEATGTVNRSDFGVKKYVPYVGDAVDLHIAGAFERQG
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787295, Length=157, Percent_Identity=39.4904458598726, Blast_Score=116, Evalue=1e-27,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007372 [H]
Pfam domain/function: PF04264 YceI [H]
EC number: NA
Molecular weight: Translated: 21492; Mature: 21492
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRSLLSASAAATVLLAVTAGAVSAQTPAKPADVQGGTYQVEPSHTQVGFSLLHFGFTYY CCHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHH SGLFSNVSGTLTLDPKAPSGSALNVTIPVASVQTTSGKLDEELKGAEWFDAAQFPNATFT HHHHHCCCEEEEECCCCCCCCEEEEEEEEEEEECCCCCCCHHHCCCCCCHHHCCCCCCCC STKVIPTGKDRATVTGNLTIHGITKPETLKVRFIGAGVNPMDKKYTVGFEATGTVNRSDF CEEEEECCCCCEEEEECEEEEECCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCC GVKKYVPYVGDAVDLHIAGAFERQG CHHHHCCCCCCEEEEEEEEEECCCC >Mature Secondary Structure MFRSLLSASAAATVLLAVTAGAVSAQTPAKPADVQGGTYQVEPSHTQVGFSLLHFGFTYY CCHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHH SGLFSNVSGTLTLDPKAPSGSALNVTIPVASVQTTSGKLDEELKGAEWFDAAQFPNATFT HHHHHCCCEEEEECCCCCCCCEEEEEEEEEEEECCCCCCCHHHCCCCCCHHHCCCCCCCC STKVIPTGKDRATVTGNLTIHGITKPETLKVRFIGAGVNPMDKKYTVGFEATGTVNRSDF CEEEEECCCCCEEEEECEEEEECCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCC GVKKYVPYVGDAVDLHIAGAFERQG CHHHHCCCCCCEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA