Click here to switch to the map view.

The map label for this gene is rhtA [H]

Identifier: 162147270

GI number: 162147270

Start: 1483085

End: 1484029

Strand: Reverse

Name: rhtA [H]

Synonym: GDI_1475

Alternate gene names: 162147270

Gene position: 1484029-1483085 (Counterclockwise)

Preceding gene: 162147271

Following gene: 162147269

Centisome position: 37.63

GC content: 72.28

Gene sequence:

>945_bases
ATGACCGCCAGTACATCCCAGGCCGCTCTTGCACCCGGCGCGCCCGCCGACGGGCAATCGGACGGCGGGCCGGTGGGCGG
CGCGCTGCTGATGCTGTGCGGGATCGCCTCGTTCCAGATGGGCGCGTCGATCGCAAAAGACCTGTTCCCGCTGTTCGGAC
CGCTGGGCATGGTCGGGCTGCGGCTGTGGATCGCCGCGATCGTGCTGTGCGCGCTGGCGCGCCCATGGCGCATGGTGCCG
GACCGCGCCACCCTGTGGCTGATCGTGCAATACGGCACGGTGGTCTGCCTGATGAACATGACGTTCTACCTGTCCCTGGC
GCGGCTGCCGCTGGGGATCGCGGTGGCGATCGAATTCCTGGGCCCGCTGGCGCTGGCCCTGCTGGGATCGCGCCGGCCCG
TCGACCTGCTGCTGGTCGCGCTGGCGGCGGCGGGTCTGGACCTGCTGCTGCAACCGGGCGCGGTGCTGCGCGGGCGGGGG
CTGGACCCGCTGGGCGTGGGCTTCGGCCTGCTGGCCGCCGCGTCATGGGCGGCCTATATCGTGATCGGCGCACGGGTCAG
CCGGCGGATCGACGCCACGCGGGCCACCGCGATCGGGCTGGGGGTGGGGGCGCTGCTGCTGACGCCGCTGGCGGCGGCGA
CCCTGCCGCGCATCGCGTCCCATCCCCACGCCGGTCTCCTGGCCGGCCTGGTGGCGATCCTGTCCTCCGCCGTGCCCTAT
ACGCTGGAAATGCTGGCCATGAAGCGGCTGCACCCGCGCCAGTACGGCATCCTCAGCAGCCTGGACCCGGCCATGGCGGT
GGTCATCGGCCTGGTGCTGCTGGGCGAGCATCCGGACCCGTCGCAATGGACGGGAATCCTGTGCATCGTCCTGTCGTCGA
TCATCGGCATCGTGATCCGGCAGTCGGGCGGCCAGGCCGCTCCGCCGCCCGCCCCCGACCTCTGA

Upstream 100 bases:

>100_bases
CGGAACTGCGCTTCCAGTTCATTCAGGAACACGCGCAGACCGTCGAAGACCTGGACGTTTGAATGTCTGTCCGGGCTGCG
CCCCGGGCCGCAGGAGTTCC

Downstream 100 bases:

>100_bases
ATCCGCCCTTCCCAATCCAAACCCCACGGACCGCCTCATGCTCCAGATCGATTCGCTTGTCTTCAACGCCTGGGGGCGGC
GGTTCTTCGACCGGGCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MTASTSQAALAPGAPADGQSDGGPVGGALLMLCGIASFQMGASIAKDLFPLFGPLGMVGLRLWIAAIVLCALARPWRMVP
DRATLWLIVQYGTVVCLMNMTFYLSLARLPLGIAVAIEFLGPLALALLGSRRPVDLLLVALAAAGLDLLLQPGAVLRGRG
LDPLGVGFGLLAAASWAAYIVIGARVSRRIDATRATAIGLGVGALLLTPLAAATLPRIASHPHAGLLAGLVAILSSAVPY
TLEMLAMKRLHPRQYGILSSLDPAMAVVIGLVLLGEHPDPSQWTGILCIVLSSIIGIVIRQSGGQAAPPPAPDL

Sequences:

>Translated_314_residues
MTASTSQAALAPGAPADGQSDGGPVGGALLMLCGIASFQMGASIAKDLFPLFGPLGMVGLRLWIAAIVLCALARPWRMVP
DRATLWLIVQYGTVVCLMNMTFYLSLARLPLGIAVAIEFLGPLALALLGSRRPVDLLLVALAAAGLDLLLQPGAVLRGRG
LDPLGVGFGLLAAASWAAYIVIGARVSRRIDATRATAIGLGVGALLLTPLAAATLPRIASHPHAGLLAGLVAILSSAVPY
TLEMLAMKRLHPRQYGILSSLDPAMAVVIGLVLLGEHPDPSQWTGILCIVLSSIIGIVIRQSGGQAAPPPAPDL
>Mature_313_residues
TASTSQAALAPGAPADGQSDGGPVGGALLMLCGIASFQMGASIAKDLFPLFGPLGMVGLRLWIAAIVLCALARPWRMVPD
RATLWLIVQYGTVVCLMNMTFYLSLARLPLGIAVAIEFLGPLALALLGSRRPVDLLLVALAAAGLDLLLQPGAVLRGRGL
DPLGVGFGLLAAASWAAYIVIGARVSRRIDATRATAIGLGVGALLLTPLAAATLPRIASHPHAGLLAGLVAILSSAVPYT
LEMLAMKRLHPRQYGILSSLDPAMAVVIGLVLLGEHPDPSQWTGILCIVLSSIIGIVIRQSGGQAAPPPAPDL

Specific function: Unknown

COG id: COG5006

COG function: function code R; Predicted permease, DMT superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1787033, Length=254, Percent_Identity=42.5196850393701, Blast_Score=162, Evalue=4e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32251; Mature: 32120

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASTSQAALAPGAPADGQSDGGPVGGALLMLCGIASFQMGASIAKDLFPLFGPLGMVGL
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLWIAAIVLCALARPWRMVPDRATLWLIVQYGTVVCLMNMTFYLSLARLPLGIAVAIEFL
HHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GPLALALLGSRRPVDLLLVALAAAGLDLLLQPGAVLRGRGLDPLGVGFGLLAAASWAAYI
HHHHHHHHCCCCCHHHHHHHHHHHCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VIGARVSRRIDATRATAIGLGVGALLLTPLAAATLPRIASHPHAGLLAGLVAILSSAVPY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHH
TLEMLAMKRLHPRQYGILSSLDPAMAVVIGLVLLGEHPDPSQWTGILCIVLSSIIGIVIR
HHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
QSGGQAAPPPAPDL
CCCCCCCCCCCCCC
>Mature Secondary Structure 
TASTSQAALAPGAPADGQSDGGPVGGALLMLCGIASFQMGASIAKDLFPLFGPLGMVGL
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLWIAAIVLCALARPWRMVPDRATLWLIVQYGTVVCLMNMTFYLSLARLPLGIAVAIEFL
HHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GPLALALLGSRRPVDLLLVALAAAGLDLLLQPGAVLRGRGLDPLGVGFGLLAAASWAAYI
HHHHHHHHCCCCCHHHHHHHHHHHCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VIGARVSRRIDATRATAIGLGVGALLLTPLAAATLPRIASHPHAGLLAGLVAILSSAVPY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHH
TLEMLAMKRLHPRQYGILSSLDPAMAVVIGLVLLGEHPDPSQWTGILCIVLSSIIGIVIR
HHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
QSGGQAAPPPAPDL
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]