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The map label for this gene is 162147219

Identifier: 162147219

GI number: 162147219

Start: 1426836

End: 1429034

Strand: Reverse

Name: 162147219

Synonym: GDI_1424

Alternate gene names: NA

Gene position: 1429034-1426836 (Counterclockwise)

Preceding gene: 162147220

Following gene: 162147218

Centisome position: 36.23

GC content: 68.71

Gene sequence:

>2199_bases
ATGGACACTCAATCCGAGACCCATCCGCCGCCGCCGCCCGCCGCCGACCTGGACGGCTTTCCGGTCGCCGCGAAGTCGCT
GCTGTCGGAACGGCGGCTGCACACCCTCAAGCAGGGGGACATGTTCGGCGTCTTCGACCAGACGGGCGACATCCTGTTCG
GCGACGGCATCGCGGACGGGCTGTATTTCCATGACACGCGCTACCTATCCGGCCTGTCCATGACCCTGCAGGGCGTGCGG
CCGATCCTGCTGTCCTCGACGGTGCGCGAGAACAACGTGCTGCTGTCGGTCGACCTGACGAACACGGACATCGACGGGCC
GGACGGCCGGAAGATGAATCACGACCTGCTGCATGTCCGCCGGTCGCGCTTCCTGTGGAACCGCGTGTGCTACGAACGGG
TCGAAATCCGCAATTTCGACGTGGAACCCCGCACCGCGCTGCTGGACATCCGCTTCCTGGCCGATTTCGCGGACCTGTTC
GAGGCCCGCGGTTCCACCCGCGCCCGTCGCGGCACGCAGCGCGAACCCGTGGTCACCGACAGCGAGGTAACGCTGGCCTA
TGACGGGCTGGACGGGCGGCGGCGGACCACCCTGCTGCGCTTCTGGCCGCCGCCGGCATCGCTGGACGCACGCCATGCCG
CCTTCCGCTTCGACCTGCCGCCGGGGCAGCGGGTGCTGATCCATTACGAGGTCGAGTGCGACCCCGACGGCGTCCACGAC
GCCCAGCCGAACCGCCGCTTCCTGACCGGCGCGGTCGAGGCCCGGCGGGCGCTACGCCTGTCCTCGTCCCGGGCGGCGGC
GATCGCCACGTCCAACGAGATCTTCAACGAGGCCATCCGCCGCTGCATCTGCGACATCTACATGCTGCTGACGGACAAGA
AGACCGGTCCGTACCCCTATGCCGGCGTGCCGTGGTTCAGCACCGCCTTCGGCCGCGACGCGCTGATCACCGCCATGCTG
ACGCTGTGGCTGGACCCGGAGATCGCGCGGGGGGTCCTGAACTACCTGGCCCGGCACCAGGCCCGGGTCGAGGACCCCGT
CGCCGACGCCGAGCCGGGCAAGATTCTGCACGAGGTCCGGCACGGCGAGATGGCGGAACTGGGCGAGGTACCGTTCCGGC
ATTATTACGGATCGATCGATTCCACGCCGCTGTTCGTCATGCTGGCGGGCCAGTATCTGGAGCGGACGGGCGACGTCGCG
CTGATGACCATGATCTGGCCGAACATCGAACGCGCGATCGACTGGATCGACCGCTACGGCGACCGCGACGGCGACGGGTT
CGTCGAATATGGCCGCCGCAACAAGGACGGGCTGATCAATCAGGGCTGGAAGGACAGCTACGACAGCATCTTCCACGCCG
ACGGCACGCTGGCCGAAGGCCCGATCGCGCTGTGCGAGGTCCAGGCCTATGTCTACGCCGCGCGGCGCGCCGCCGCGACC
ATCGGGCGCCGGCTGGGCAAGACGGCCTATGCCGAGCGGCAGGACCACCTGGCCGAGGCGCTGCGCGTGGCCTTCAACGC
GCGCTTCTGGATCGAGGAACTGGGCACCTTCGCTCTGGCGCTGGACGGCCACAAGAAACAGTGCCGCGTCCGGTCGTCGA
ATGCCGGGCATGTCCTGCTGACCGACATCACGACCCCGGACCGGGTGCCGTCCCTGGTCCAGGGGCTGATGCACCGGTCG
TCCTTCACCGGCTGGGGCATCCGCACGATCCCCGAGGGCGAGGCGCGCTACAACCCGATGGCCTATCACAACGGATCGGT
CTGGCCGCACGACAACGCGCTGATCGGGCTGGGGCTGGCCCGCCACGGCTATCGCGACGAGGCCGCGCGCCTGTTCCGCG
GCATGTTCGAGGCCGCGTTCTATACCGACCTGCGGCGCCTGCCGGAACTGTTCTGCGGCTTCACCCGCAACCGGGCGGAG
GGGCCGGTGCGCTACCCGGTGGCCTGTTCGCCACAGGGCTGGGCGGCGGCGACGCTGCCGGCGCTGATCCAGTCTACCCT
CGGCCTGAGCTTCGACCCCGCGACGGTGGCGGTGCATTTCGAGCGGCCGCGCCTGCCGGAATTCCTGGACGAGATGACGC
TGTACAACCTGGAAATCGGCGGCGACCGGGTGACGGTACGCCTGGTCCGCGTCGGCAACGAGGTCGCGATCAACGTGGTC
GAGCGCACGGAATCGATCCGGGTGCAGATCGCAAGCTGA

Upstream 100 bases:

>100_bases
TGAAATTCGCCAAACTGCTCTGACCCCATCCGGTCGGGTCGGCCCCCATCAGTCCGGACCCCGGAACAGACGATCCGGCA
ACCGCGAAGGACATACCGTC

Downstream 100 bases:

>100_bases
GGAGACAGGCGGCGCACGCGATTCTGTTGCGCCAAAGATCGGGTTTCTGTAAAGCCTTAGAGGACATTCCTTTCCATCGA
CCTGAAGTGGTCCAGAATTT

Product: amylo-alpha-1,6-glucosidase

Products: NA

Alternate protein names: Amylo-Alpha-1 6-Glucosidase; Glycogen Debranching; Glycogen Debranching Protein; Amylo-Alpha-1 6-Glucosidase Family; Glycogen Debranching Family Protein; LOW QUALITY PROTEIN Amylo-Alpha-1 6-Glucosidase; Neutral Invertase; Glycoside Transferase; Amylo-Alpha-1 6-Glucosidase Protein; Amylo-Alpha-1 6-Glucosidase Family Protein

Number of amino acids: Translated: 732; Mature: 732

Protein sequence:

>732_residues
MDTQSETHPPPPPAADLDGFPVAAKSLLSERRLHTLKQGDMFGVFDQTGDILFGDGIADGLYFHDTRYLSGLSMTLQGVR
PILLSSTVRENNVLLSVDLTNTDIDGPDGRKMNHDLLHVRRSRFLWNRVCYERVEIRNFDVEPRTALLDIRFLADFADLF
EARGSTRARRGTQREPVVTDSEVTLAYDGLDGRRRTTLLRFWPPPASLDARHAAFRFDLPPGQRVLIHYEVECDPDGVHD
AQPNRRFLTGAVEARRALRLSSSRAAAIATSNEIFNEAIRRCICDIYMLLTDKKTGPYPYAGVPWFSTAFGRDALITAML
TLWLDPEIARGVLNYLARHQARVEDPVADAEPGKILHEVRHGEMAELGEVPFRHYYGSIDSTPLFVMLAGQYLERTGDVA
LMTMIWPNIERAIDWIDRYGDRDGDGFVEYGRRNKDGLINQGWKDSYDSIFHADGTLAEGPIALCEVQAYVYAARRAAAT
IGRRLGKTAYAERQDHLAEALRVAFNARFWIEELGTFALALDGHKKQCRVRSSNAGHVLLTDITTPDRVPSLVQGLMHRS
SFTGWGIRTIPEGEARYNPMAYHNGSVWPHDNALIGLGLARHGYRDEAARLFRGMFEAAFYTDLRRLPELFCGFTRNRAE
GPVRYPVACSPQGWAAATLPALIQSTLGLSFDPATVAVHFERPRLPEFLDEMTLYNLEIGGDRVTVRLVRVGNEVAINVV
ERTESIRVQIAS

Sequences:

>Translated_732_residues
MDTQSETHPPPPPAADLDGFPVAAKSLLSERRLHTLKQGDMFGVFDQTGDILFGDGIADGLYFHDTRYLSGLSMTLQGVR
PILLSSTVRENNVLLSVDLTNTDIDGPDGRKMNHDLLHVRRSRFLWNRVCYERVEIRNFDVEPRTALLDIRFLADFADLF
EARGSTRARRGTQREPVVTDSEVTLAYDGLDGRRRTTLLRFWPPPASLDARHAAFRFDLPPGQRVLIHYEVECDPDGVHD
AQPNRRFLTGAVEARRALRLSSSRAAAIATSNEIFNEAIRRCICDIYMLLTDKKTGPYPYAGVPWFSTAFGRDALITAML
TLWLDPEIARGVLNYLARHQARVEDPVADAEPGKILHEVRHGEMAELGEVPFRHYYGSIDSTPLFVMLAGQYLERTGDVA
LMTMIWPNIERAIDWIDRYGDRDGDGFVEYGRRNKDGLINQGWKDSYDSIFHADGTLAEGPIALCEVQAYVYAARRAAAT
IGRRLGKTAYAERQDHLAEALRVAFNARFWIEELGTFALALDGHKKQCRVRSSNAGHVLLTDITTPDRVPSLVQGLMHRS
SFTGWGIRTIPEGEARYNPMAYHNGSVWPHDNALIGLGLARHGYRDEAARLFRGMFEAAFYTDLRRLPELFCGFTRNRAE
GPVRYPVACSPQGWAAATLPALIQSTLGLSFDPATVAVHFERPRLPEFLDEMTLYNLEIGGDRVTVRLVRVGNEVAINVV
ERTESIRVQIAS
>Mature_732_residues
MDTQSETHPPPPPAADLDGFPVAAKSLLSERRLHTLKQGDMFGVFDQTGDILFGDGIADGLYFHDTRYLSGLSMTLQGVR
PILLSSTVRENNVLLSVDLTNTDIDGPDGRKMNHDLLHVRRSRFLWNRVCYERVEIRNFDVEPRTALLDIRFLADFADLF
EARGSTRARRGTQREPVVTDSEVTLAYDGLDGRRRTTLLRFWPPPASLDARHAAFRFDLPPGQRVLIHYEVECDPDGVHD
AQPNRRFLTGAVEARRALRLSSSRAAAIATSNEIFNEAIRRCICDIYMLLTDKKTGPYPYAGVPWFSTAFGRDALITAML
TLWLDPEIARGVLNYLARHQARVEDPVADAEPGKILHEVRHGEMAELGEVPFRHYYGSIDSTPLFVMLAGQYLERTGDVA
LMTMIWPNIERAIDWIDRYGDRDGDGFVEYGRRNKDGLINQGWKDSYDSIFHADGTLAEGPIALCEVQAYVYAARRAAAT
IGRRLGKTAYAERQDHLAEALRVAFNARFWIEELGTFALALDGHKKQCRVRSSNAGHVLLTDITTPDRVPSLVQGLMHRS
SFTGWGIRTIPEGEARYNPMAYHNGSVWPHDNALIGLGLARHGYRDEAARLFRGMFEAAFYTDLRRLPELFCGFTRNRAE
GPVRYPVACSPQGWAAATLPALIQSTLGLSFDPATVAVHFERPRLPEFLDEMTLYNLEIGGDRVTVRLVRVGNEVAINVV
ERTESIRVQIAS

Specific function: Unknown

COG id: COG3408

COG function: function code G; Glycogen debranching enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82200; Mature: 82200

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTQSETHPPPPPAADLDGFPVAAKSLLSERRLHTLKQGDMFGVFDQTGDILFGDGIADG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCCC
LYFHDTRYLSGLSMTLQGVRPILLSSTVRENNVLLSVDLTNTDIDGPDGRKMNHDLLHVR
EEEECHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHH
RSRFLWNRVCYERVEIRNFDVEPRTALLDIRFLADFADLFEARGSTRARRGTQREPVVTD
HHHHHHHHHHHHHHHHCCCCCCCCHHEEHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC
SEVTLAYDGLDGRRRTTLLRFWPPPASLDARHAAFRFDLPPGQRVLIHYEVECDPDGVHD
CCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEEEECCCCCCC
AQPNRRFLTGAVEARRALRLSSSRAAAIATSNEIFNEAIRRCICDIYMLLTDKKTGPYPY
CCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AGVPWFSTAFGRDALITAMLTLWLDPEIARGVLNYLARHQARVEDPVADAEPGKILHEVR
CCCCCHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
HGEMAELGEVPFRHYYGSIDSTPLFVMLAGQYLERTGDVALMTMIWPNIERAIDWIDRYG
CCCHHHHHCCCHHHHCCCCCCCCEEEEEHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHC
DRDGDGFVEYGRRNKDGLINQGWKDSYDSIFHADGTLAEGPIALCEVQAYVYAARRAAAT
CCCCCCHHHCCCCCCCCCCCCCCCCCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
IGRRLGKTAYAERQDHLAEALRVAFNARFWIEELGTFALALDGHKKQCRVRSSNAGHVLL
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHEEEECCCCCEEEE
TDITTPDRVPSLVQGLMHRSSFTGWGIRTIPEGEARYNPMAYHNGSVWPHDNALIGLGLA
EECCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCCEEEEHHH
RHGYRDEAARLFRGMFEAAFYTDLRRLPELFCGFTRNRAEGPVRYPVACSPQGWAAATLP
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCEEECCCCCHHHHHH
ALIQSTLGLSFDPATVAVHFERPRLPEFLDEMTLYNLEIGGDRVTVRLVRVGNEVAINVV
HHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHEEEEEEECCCEEEEEEEEECCHHEEEEE
ERTESIRVQIAS
ECCCEEEEEECC
>Mature Secondary Structure
MDTQSETHPPPPPAADLDGFPVAAKSLLSERRLHTLKQGDMFGVFDQTGDILFGDGIADG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCCC
LYFHDTRYLSGLSMTLQGVRPILLSSTVRENNVLLSVDLTNTDIDGPDGRKMNHDLLHVR
EEEECHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHH
RSRFLWNRVCYERVEIRNFDVEPRTALLDIRFLADFADLFEARGSTRARRGTQREPVVTD
HHHHHHHHHHHHHHHHCCCCCCCCHHEEHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC
SEVTLAYDGLDGRRRTTLLRFWPPPASLDARHAAFRFDLPPGQRVLIHYEVECDPDGVHD
CCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEEEECCCCCCC
AQPNRRFLTGAVEARRALRLSSSRAAAIATSNEIFNEAIRRCICDIYMLLTDKKTGPYPY
CCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AGVPWFSTAFGRDALITAMLTLWLDPEIARGVLNYLARHQARVEDPVADAEPGKILHEVR
CCCCCHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
HGEMAELGEVPFRHYYGSIDSTPLFVMLAGQYLERTGDVALMTMIWPNIERAIDWIDRYG
CCCHHHHHCCCHHHHCCCCCCCCEEEEEHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHC
DRDGDGFVEYGRRNKDGLINQGWKDSYDSIFHADGTLAEGPIALCEVQAYVYAARRAAAT
CCCCCCHHHCCCCCCCCCCCCCCCCCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
IGRRLGKTAYAERQDHLAEALRVAFNARFWIEELGTFALALDGHKKQCRVRSSNAGHVLL
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHEEEECCCCCEEEE
TDITTPDRVPSLVQGLMHRSSFTGWGIRTIPEGEARYNPMAYHNGSVWPHDNALIGLGLA
EECCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCCEEEEHHH
RHGYRDEAARLFRGMFEAAFYTDLRRLPELFCGFTRNRAEGPVRYPVACSPQGWAAATLP
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCEEECCCCCHHHHHH
ALIQSTLGLSFDPATVAVHFERPRLPEFLDEMTLYNLEIGGDRVTVRLVRVGNEVAINVV
HHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHEEEEEEECCCEEEEEEEEECCHHEEEEE
ERTESIRVQIAS
ECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA