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The map label for this gene is yjbJ [H]

Identifier: 162147217

GI number: 162147217

Start: 1425273

End: 1426655

Strand: Reverse

Name: yjbJ [H]

Synonym: GDI_1422

Alternate gene names: 162147217

Gene position: 1426655-1425273 (Counterclockwise)

Preceding gene: 162147218

Following gene: 162147216

Centisome position: 36.17

GC content: 73.54

Gene sequence:

>1383_bases
ATGACCCGACGCCCGCACGGTTCCGCCCCCCGTCCATTCCGGCACAAACAGGACGACCGGGGGGCCGGGGCCACCGTTGC
GCCCAGGGTCGCGGGCGCCGTGGCGGCCCGCGTCGCAGGGGTGGCCGGGCTGGCGGGGCTGCTGGCGGCCTGTGCCGGCA
CGTCGGGCCCGCAGATCCCCGTGACGCAGGAAGCCGCGAATTACCGCGCGCATGCCAAATCCTACTACGCCCCGCCGGGA
CCGCCCGAGGACCCGTGGGGCCCGTATATCGAGGAAGCGTCCAAGCGTTTCGACGTGCCGGATACATGGATTCGCTCCGT
CATGCAGCGGGAATCCGGCGGCCAGTTGTTCCGCAACGGCCAGTTCGTGACCTCGGCCCCCGGGGCGATGGGCCTGATGC
AGTTGATGCCCCCCACCTATGACGAGCTGAAGGGTGAGTACGGGCTGGGCGACGACCCGTTCAACCCGCATGACAACATC
CTGGCCGGCACCGCCTATATCCGGCAGATGTACGACATCTACGGCTCTCCCGGCTTCCTGGCCGCGTACAATACCGGACC
GGGGCGCCTGGACGATTTCCTGGTCCATAACCGGACCCTGCCGCGCGAAACCCGCAACTATGTCGCCGCGATCGGCCCGC
AGATCGCCGGCATCACGCCCAATGTCCGCTCGCAGGCCGACCTGATGGTCGAAGCCCACGACGTGGCGCGCGGCCATGTC
TACGCGGCCGCGCAGACCAGCGCGGAAACCCGCTCGGTCCGCATGGCCTGGGCCCGGCGCGCCGACCATGGCGGCACCGA
CGATACCCAGCCCGTCCAGGTCGCCGAGGCCCCGCCCGAGACCGACCGCGCGCCCGCCCCCGCCTATACGGCCTGGAAGA
GCGTGGCCCCCGCCGGCGGCGGAACACCGGCCGACGCGGTCCGCGCCGCCTGGGCCGCCCGTGCGCGGCCCGAGGACGAA
AGCCCCGCCACGCCCCCGGCCCTGGCCGCGGCGGCCCCGCCGCTCGCGCCGCTGCCCGCCGCCCCGCCGGCGGCAGGCCC
CGCCAGCGGGCACGGCTTCCACCTGGTCAACCCGGCGATGGCCGAGCCCGCGCCCCTGCTGCGCCGGTCCAGCCTGGCGC
CGGCCCCCCGCGACTGGGCCATTCAGGTCGGGGCGTTCGGTTCGTCCGCGCTGGCGTCACAGGCGGCGGGCCATGCCCGC
CAGCGCGCCGCCACCGTGCTGGGCGCCGCCCGGCCGCAGGTGGCCAGCGTGCATATCGCCAGCGGGCACCTGTATCGCGC
GCGACTGACCGGCCTGTCACACGATGCGGCGATCGAGGCCTGCCGCCGCCTGTCGGGCGGTGCGGATAATTGTGTTGTCA
TTTCCCCCGATTCGCGGTCCTGA

Upstream 100 bases:

>100_bases
CCTGAAGTGGTCCAGAATTTCGCCACAATCGGTCCCGAACGTCTGTCCTCTTCACGGCGTGGCCCGTCCGGGCCCGGCGC
CTGTTCCGGATGAGTCCCTG

Downstream 100 bases:

>100_bases
TGGCAACGTACCTGAGCGTATAGGGCCCATCATGCTCCGCACTCTTCTTCTGCGCCGCTGCGTCAGGTTGGGCATGGCGC
TGCCCCTGGCGATCGCGCTG

Product: lytic transglycosylase, catalytic

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MTRRPHGSAPRPFRHKQDDRGAGATVAPRVAGAVAARVAGVAGLAGLLAACAGTSGPQIPVTQEAANYRAHAKSYYAPPG
PPEDPWGPYIEEASKRFDVPDTWIRSVMQRESGGQLFRNGQFVTSAPGAMGLMQLMPPTYDELKGEYGLGDDPFNPHDNI
LAGTAYIRQMYDIYGSPGFLAAYNTGPGRLDDFLVHNRTLPRETRNYVAAIGPQIAGITPNVRSQADLMVEAHDVARGHV
YAAAQTSAETRSVRMAWARRADHGGTDDTQPVQVAEAPPETDRAPAPAYTAWKSVAPAGGGTPADAVRAAWAARARPEDE
SPATPPALAAAAPPLAPLPAAPPAAGPASGHGFHLVNPAMAEPAPLLRRSSLAPAPRDWAIQVGAFGSSALASQAAGHAR
QRAATVLGAARPQVASVHIASGHLYRARLTGLSHDAAIEACRRLSGGADNCVVISPDSRS

Sequences:

>Translated_460_residues
MTRRPHGSAPRPFRHKQDDRGAGATVAPRVAGAVAARVAGVAGLAGLLAACAGTSGPQIPVTQEAANYRAHAKSYYAPPG
PPEDPWGPYIEEASKRFDVPDTWIRSVMQRESGGQLFRNGQFVTSAPGAMGLMQLMPPTYDELKGEYGLGDDPFNPHDNI
LAGTAYIRQMYDIYGSPGFLAAYNTGPGRLDDFLVHNRTLPRETRNYVAAIGPQIAGITPNVRSQADLMVEAHDVARGHV
YAAAQTSAETRSVRMAWARRADHGGTDDTQPVQVAEAPPETDRAPAPAYTAWKSVAPAGGGTPADAVRAAWAARARPEDE
SPATPPALAAAAPPLAPLPAAPPAAGPASGHGFHLVNPAMAEPAPLLRRSSLAPAPRDWAIQVGAFGSSALASQAAGHAR
QRAATVLGAARPQVASVHIASGHLYRARLTGLSHDAAIEACRRLSGGADNCVVISPDSRS
>Mature_459_residues
TRRPHGSAPRPFRHKQDDRGAGATVAPRVAGAVAARVAGVAGLAGLLAACAGTSGPQIPVTQEAANYRAHAKSYYAPPGP
PEDPWGPYIEEASKRFDVPDTWIRSVMQRESGGQLFRNGQFVTSAPGAMGLMQLMPPTYDELKGEYGLGDDPFNPHDNIL
AGTAYIRQMYDIYGSPGFLAAYNTGPGRLDDFLVHNRTLPRETRNYVAAIGPQIAGITPNVRSQADLMVEAHDVARGHVY
AAAQTSAETRSVRMAWARRADHGGTDDTQPVQVAEAPPETDRAPAPAYTAWKSVAPAGGGTPADAVRAAWAARARPEDES
PATPPALAAAAPPLAPLPAAPPAAGPASGHGFHLVNPAMAEPAPLLRRSSLAPAPRDWAIQVGAFGSSALASQAAGHARQ
RAATVLGAARPQVASVHIASGHLYRARLTGLSHDAAIEACRRLSGGADNCVVISPDSRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 48010; Mature: 47879

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRPHGSAPRPFRHKQDDRGAGATVAPRVAGAVAARVAGVAGLAGLLAACAGTSGPQIP
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VTQEAANYRAHAKSYYAPPGPPEDPWGPYIEEASKRFDVPDTWIRSVMQRESGGQLFRNG
CCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECC
QFVTSAPGAMGLMQLMPPTYDELKGEYGLGDDPFNPHDNILAGTAYIRQMYDIYGSPGFL
EEEECCCCHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCEE
AAYNTGPGRLDDFLVHNRTLPRETRNYVAAIGPQIAGITPNVRSQADLMVEAHDVARGHV
EEECCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHEEEEHHHHCCCEE
YAAAQTSAETRSVRMAWARRADHGGTDDTQPVQVAEAPPETDRAPAPAYTAWKSVAPAGG
EEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCC
GTPADAVRAAWAARARPEDESPATPPALAAAAPPLAPLPAAPPAAGPASGHGFHLVNPAM
CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
AEPAPLLRRSSLAPAPRDWAIQVGAFGSSALASQAAGHARQRAATVLGAARPQVASVHIA
CCCHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
SGHLYRARLTGLSHDAAIEACRRLSGGADNCVVISPDSRS
CCCEEEEHHCCCCHHHHHHHHHHHCCCCCCEEEECCCCCC
>Mature Secondary Structure 
TRRPHGSAPRPFRHKQDDRGAGATVAPRVAGAVAARVAGVAGLAGLLAACAGTSGPQIP
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VTQEAANYRAHAKSYYAPPGPPEDPWGPYIEEASKRFDVPDTWIRSVMQRESGGQLFRNG
CCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECC
QFVTSAPGAMGLMQLMPPTYDELKGEYGLGDDPFNPHDNILAGTAYIRQMYDIYGSPGFL
EEEECCCCHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCEE
AAYNTGPGRLDDFLVHNRTLPRETRNYVAAIGPQIAGITPNVRSQADLMVEAHDVARGHV
EEECCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHEEEEHHHHCCCEE
YAAAQTSAETRSVRMAWARRADHGGTDDTQPVQVAEAPPETDRAPAPAYTAWKSVAPAGG
EEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCC
GTPADAVRAAWAARARPEDESPATPPALAAAAPPLAPLPAAPPAAGPASGHGFHLVNPAM
CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
AEPAPLLRRSSLAPAPRDWAIQVGAFGSSALASQAAGHARQRAATVLGAARPQVASVHIA
CCCHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
SGHLYRARLTGLSHDAAIEACRRLSGGADNCVVISPDSRS
CCCEEEEHHCCCCHHHHHHHHHHHCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]