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The map label for this gene is 162147208

Identifier: 162147208

GI number: 162147208

Start: 1414566

End: 1414910

Strand: Reverse

Name: 162147208

Synonym: GDI_1413

Alternate gene names: NA

Gene position: 1414910-1414566 (Counterclockwise)

Preceding gene: 162147216

Following gene: 162147207

Centisome position: 35.87

GC content: 70.72

Gene sequence:

>345_bases
ATGATCGACTGGTCCGCCTATCGCCGCTATCTCGGCCAGACCATGCCCAAGCTGGCTGCCCTGACACCCGGTACGGTCGA
GGGCCTGACCACGCTGGAAGAGGCCGCCGTCACCACCGGCCGGCTGGACGCCAAGACGCGCGAACTGATCGCGCTGGCGG
TGGCGGTCACGACCCGCTGCGACGGATGCATCGCGGTCCATTCCAGGGCGGCGGTGGACGCCGGCGCCACGAAGGAGGAA
ATCGCCGAGGCGCTGGGTGTCGCCGTCGCGCTGAATGCCGGGGCGGCGGCGGTCTATTCCACCCGGGTGATCGACGCGGT
GCAGAAGGCCGCCGAGGCGGGCTGA

Upstream 100 bases:

>100_bases
AGCAAGAGCGTGCGGTCGCCAAACCGTGTCGTGACAGGCCTGCTCTCTATCTGGTGAACTTGAAACCGTATTCACGACCA
CGAAACAAGGATGTTGCGCG

Downstream 100 bases:

>100_bases
GACGGGGCGGGGCGGGTGCGCGCCAATGCCTTGATTCCGGGGCACCTCCGGGCCTAGGAATTGGAATCTGGTCTCCATCA
GCCCTTCGCAGGTACCATGA

Product: carboxymuconolactone decarboxylase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MIDWSAYRRYLGQTMPKLAALTPGTVEGLTTLEEAAVTTGRLDAKTRELIALAVAVTTRCDGCIAVHSRAAVDAGATKEE
IAEALGVAVALNAGAAAVYSTRVIDAVQKAAEAG

Sequences:

>Translated_114_residues
MIDWSAYRRYLGQTMPKLAALTPGTVEGLTTLEEAAVTTGRLDAKTRELIALAVAVTTRCDGCIAVHSRAAVDAGATKEE
IAEALGVAVALNAGAAAVYSTRVIDAVQKAAEAG
>Mature_114_residues
MIDWSAYRRYLGQTMPKLAALTPGTVEGLTTLEEAAVTTGRLDAKTRELIALAVAVTTRCDGCIAVHSRAAVDAGATKEE
IAEALGVAVALNAGAAAVYSTRVIDAVQKAAEAG

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004675
- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 11702; Mature: 11702

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDWSAYRRYLGQTMPKLAALTPGTVEGLTTLEEAAVTTGRLDAKTRELIALAVAVTTRC
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
DGCIAVHSRAAVDAGATKEEIAEALGVAVALNAGAAAVYSTRVIDAVQKAAEAG
CCCEEHHCHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIDWSAYRRYLGQTMPKLAALTPGTVEGLTTLEEAAVTTGRLDAKTRELIALAVAVTTRC
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
DGCIAVHSRAAVDAGATKEEIAEALGVAVALNAGAAAVYSTRVIDAVQKAAEAG
CCCEEHHCHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]