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The map label for this gene is 162147196

Identifier: 162147196

GI number: 162147196

Start: 1403371

End: 1403895

Strand: Direct

Name: 162147196

Synonym: GDI_1401

Alternate gene names: NA

Gene position: 1403371-1403895 (Clockwise)

Preceding gene: 162147195

Following gene: 162147203

Centisome position: 35.58

GC content: 63.24

Gene sequence:

>525_bases
ATGGTAAACTATTCATTAATGCAGCATTCTTCGGATAATCGTGATTTCAAGGGGCGGAAAGACGGTTTGACTGACAAGCC
AGTTTCGGGTCCCAGCCCCGTGGACGTCCATGTCGGTGGCCGTATCCGGCTGCGCCGGACCCTGATGGGTCTGTCCCAGG
AGCGTCTGGGTGACGCCCTGGGGCTGACCTTCCAGCAGGTCCAGAAATATGAACGCGGCACCAATCGCGTCAGCGCGTCT
CGGCTGTACGAACTGTCGGAAGTGCTGGACGTGCCGGTCAGCTTCTTCTTCGACGGGCTGGACAGCGGCCAGGCCGGGTC
GAAGGCGACGAACGCGATTCCGGGCTTCGCCCAGGCCCAGGAAGCCTTCGGCGGCGCGCCCGAGGGCGCGGCCCCGGCGA
GCGAGATCGCGCTGTTTTCCCGGCGCGAGATGATCGAGCTTGTCCGTATCTATTACCGGATCGAAGATCCCGCCATGCGG
CGCCGGGTGCTGGACCTGATCCGCATGATGGCGCCGCCGGAATGA

Upstream 100 bases:

>100_bases
TTGTCCGTGCCGATCACAGGGAAAATGCGACCGCATCGCATTCCTGATTGCATTACCGGAATTTAATTCCCAAATTCCCA
GTTAGCAGGCCACCCGTATA

Downstream 100 bases:

>100_bases
CCGTCTTCCGTTTCTGAGGACAGAAGCAGCGCAGGCGTCCGGCGCCGGTTACTCGCGCCGCAGCACCTGGTCGTTGATGA
ATGAGGCCAGCCGTCCGGCC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MVNYSLMQHSSDNRDFKGRKDGLTDKPVSGPSPVDVHVGGRIRLRRTLMGLSQERLGDALGLTFQQVQKYERGTNRVSAS
RLYELSEVLDVPVSFFFDGLDSGQAGSKATNAIPGFAQAQEAFGGAPEGAAPASEIALFSRREMIELVRIYYRIEDPAMR
RRVLDLIRMMAPPE

Sequences:

>Translated_174_residues
MVNYSLMQHSSDNRDFKGRKDGLTDKPVSGPSPVDVHVGGRIRLRRTLMGLSQERLGDALGLTFQQVQKYERGTNRVSAS
RLYELSEVLDVPVSFFFDGLDSGQAGSKATNAIPGFAQAQEAFGGAPEGAAPASEIALFSRREMIELVRIYYRIEDPAMR
RRVLDLIRMMAPPE
>Mature_174_residues
MVNYSLMQHSSDNRDFKGRKDGLTDKPVSGPSPVDVHVGGRIRLRRTLMGLSQERLGDALGLTFQQVQKYERGTNRVSAS
RLYELSEVLDVPVSFFFDGLDSGQAGSKATNAIPGFAQAQEAFGGAPEGAAPASEIALFSRREMIELVRIYYRIEDPAMR
RRVLDLIRMMAPPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 19291; Mature: 19291

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNYSLMQHSSDNRDFKGRKDGLTDKPVSGPSPVDVHVGGRIRLRRTLMGLSQERLGDAL
CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHH
GLTFQQVQKYERGTNRVSASRLYELSEVLDVPVSFFFDGLDSGQAGSKATNAIPGFAQAQ
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHH
EAFGGAPEGAAPASEIALFSRREMIELVRIYYRIEDPAMRRRVLDLIRMMAPPE
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVNYSLMQHSSDNRDFKGRKDGLTDKPVSGPSPVDVHVGGRIRLRRTLMGLSQERLGDAL
CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHH
GLTFQQVQKYERGTNRVSASRLYELSEVLDVPVSFFFDGLDSGQAGSKATNAIPGFAQAQ
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHH
EAFGGAPEGAAPASEIALFSRREMIELVRIYYRIEDPAMRRRVLDLIRMMAPPE
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868435 [H]