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The map label for this gene is rimP [H]

Identifier: 162147157

GI number: 162147157

Start: 1364025

End: 1364606

Strand: Direct

Name: rimP [H]

Synonym: GDI_1362

Alternate gene names: 162147157

Gene position: 1364025-1364606 (Clockwise)

Preceding gene: 162147154

Following gene: 162147158

Centisome position: 34.58

GC content: 70.62

Gene sequence:

>582_bases
GTGGCCGCCATCGTGGCGCCCGTCCTGGCCGACATGGGATTCGAACTGGTCCGGGTGGCGATCCTGGGCCGGGAAAGCCC
GACCGTGCAGATCATGGCCGACCGTGCCGACGGCACGCTGATCGCGATCGAGGATTGCGAGCAGATCAGCCACGCGGTGG
GCGCGGTGCTGGATGTCGAGGACCCGCTGCCCGGCGCCTGGACGCTCGAGGTCTCGTCGGCGGGAATCGACCGTCCCCTG
ACGCGGGCGAAGGACTGGACGCGCTTCGCGGGCCACCTGGCGAAGGCCGAGGTGAATATCCCGATCGACGGCCGCAAGCG
GTTTTCCGGCATCCTGCTGGGGGCCGAGGACGGGTTCGGGCGCCTGCGCCTGGAAGACGGGACCGAGGTGGCGCTGCCGC
TGTCGGACATGCGCCGCGCGCGGCTGGTCCTGACCGATGAATTGATCGCGGCCAGTGCCCATATGATGCGCGCGCCCGGT
GGGGCCCCGGAAGAGGGCGAGGAAGATACTACGGAAGCGGCCCCCGAAGGGGCCGGAAAATCCCCGAAGCCCGGCCGGCG
GCCGGCGCGCAAGACTCACTGA

Upstream 100 bases:

>100_bases
CTCATTCCTTCATCTTCCGCTTTTTTGGGGGGTGGCCTGACCGGCCGCCTTTTTTGTTTTGGACGCAGACCTTCCCTACC
TGACCGGCCTGGACGCCAAG

Downstream 100 bases:

>100_bases
GACGTCCTGGAGGCTCTGATGGATACGTCCGTTTCCCGTCCCGAACTGCTGCTGGTGGCCGATGCCGTCGCGCGTGAGAA
GGCGATCGACCGGGAGGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MAAIVAPVLADMGFELVRVAILGRESPTVQIMADRADGTLIAIEDCEQISHAVGAVLDVEDPLPGAWTLEVSSAGIDRPL
TRAKDWTRFAGHLAKAEVNIPIDGRKRFSGILLGAEDGFGRLRLEDGTEVALPLSDMRRARLVLTDELIAASAHMMRAPG
GAPEEGEEDTTEAAPEGAGKSPKPGRRPARKTH

Sequences:

>Translated_193_residues
MAAIVAPVLADMGFELVRVAILGRESPTVQIMADRADGTLIAIEDCEQISHAVGAVLDVEDPLPGAWTLEVSSAGIDRPL
TRAKDWTRFAGHLAKAEVNIPIDGRKRFSGILLGAEDGFGRLRLEDGTEVALPLSDMRRARLVLTDELIAASAHMMRAPG
GAPEEGEEDTTEAAPEGAGKSPKPGRRPARKTH
>Mature_192_residues
AAIVAPVLADMGFELVRVAILGRESPTVQIMADRADGTLIAIEDCEQISHAVGAVLDVEDPLPGAWTLEVSSAGIDRPLT
RAKDWTRFAGHLAKAEVNIPIDGRKRFSGILLGAEDGFGRLRLEDGTEVALPLSDMRRARLVLTDELIAASAHMMRAPGG
APEEGEEDTTEAAPEGAGKSPKPGRRPARKTH

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=140, Percent_Identity=38.5714285714286, Blast_Score=95, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 20535; Mature: 20403

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAIVAPVLADMGFELVRVAILGRESPTVQIMADRADGTLIAIEDCEQISHAVGAVLDVE
CCHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHEEEECC
DPLPGAWTLEVSSAGIDRPLTRAKDWTRFAGHLAKAEVNIPIDGRKRFSGILLGAEDGFG
CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEECCCCCC
RLRLEDGTEVALPLSDMRRARLVLTDELIAASAHMMRAPGGAPEEGEEDTTEAAPEGAGK
EEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCC
SPKPGRRPARKTH
CCCCCCCCCCCCC
>Mature Secondary Structure 
AAIVAPVLADMGFELVRVAILGRESPTVQIMADRADGTLIAIEDCEQISHAVGAVLDVE
CHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHEEEECC
DPLPGAWTLEVSSAGIDRPLTRAKDWTRFAGHLAKAEVNIPIDGRKRFSGILLGAEDGFG
CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEECCCCCC
RLRLEDGTEVALPLSDMRRARLVLTDELIAASAHMMRAPGGAPEEGEEDTTEAAPEGAGK
EEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCC
SPKPGRRPARKTH
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA