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The map label for this gene is ybeQ [H]

Identifier: 162147134

GI number: 162147134

Start: 1337533

End: 1338183

Strand: Direct

Name: ybeQ [H]

Synonym: GDI_1339

Alternate gene names: 162147134

Gene position: 1337533-1338183 (Clockwise)

Preceding gene: 162147133

Following gene: 162147135

Centisome position: 33.91

GC content: 73.12

Gene sequence:

>651_bases
GTGTTCGCCACCGTTACCGGCCTGGCGCGGTCGGGCGATCCGGCCGCCCAGCTCGCGCTGGGGCAGATGCTCCTGAACGG
GATCGGCACCGCGCCGGCCCCGGCGGCGGCGCTGCAATGGTTCCTGGCCAGCGCGGCCCGGGGCGTCCCCATGGCGTGCA
ACATGGTCGGCCGATGCTGCGAACTGGGATGGGGCGTCCCGCCCAGCCCCGCCGACGCGATGCAATGGTATGAAAGGGCG
GCCCGCGCCGGCCTCGACTGGGGCATGTACAATTACGCGACGGGCCTCGCCCTGGGCTGGACCGCCCCGCCCGACCTGGC
GCGGGCGCTGGAATGGTTCAGGCGGGCCGCGTCCCTCGGGCATTGCAAATCCTTCAACATCATCGGCGGCTTCTACGAGG
ATGGCTGGGCCGTCCCGCGCGACCCGCGCCGGGCCCGCGCCTGTTACGCCCGCGCGGCGCGCGGCGGCGATTTTCGGGGC
TGCTTCAATCTGGGCCGCTTTCTGCTGCGGGAAGGCAGGCAGGAGGACGCGATGCGGTATTTCGCCATCGCCCGCGCCAC
CGGTACCCCGAACTTCGTGGCGAACATGGACGCGTTCCTGGCGTGTCCCGGCGGGCAGGGCGCGCCGGCCGGGGCGGGCC
TGACGGCGTGA

Upstream 100 bases:

>100_bases
ACCCATTACGCGCTGCAGGCCGCGGGCCGCACGGCCTTCGTCACGCTGAATGCGCATTTCTGATTCCTCCGCTGCCGCGC
CTGAACAGGTACCGGAACAG

Downstream 100 bases:

>100_bases
TGAACTTCGCTTCATCGGGGCCGTTTTCCTTTTCCTGACCGGCGCGGCAGGGCATGCTACCCGGCAAGTCCCTGACCGAC
CGAGGAATCCGCGCCCAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MFATVTGLARSGDPAAQLALGQMLLNGIGTAPAPAAALQWFLASAARGVPMACNMVGRCCELGWGVPPSPADAMQWYERA
ARAGLDWGMYNYATGLALGWTAPPDLARALEWFRRAASLGHCKSFNIIGGFYEDGWAVPRDPRRARACYARAARGGDFRG
CFNLGRFLLREGRQEDAMRYFAIARATGTPNFVANMDAFLACPGGQGAPAGAGLTA

Sequences:

>Translated_216_residues
MFATVTGLARSGDPAAQLALGQMLLNGIGTAPAPAAALQWFLASAARGVPMACNMVGRCCELGWGVPPSPADAMQWYERA
ARAGLDWGMYNYATGLALGWTAPPDLARALEWFRRAASLGHCKSFNIIGGFYEDGWAVPRDPRRARACYARAARGGDFRG
CFNLGRFLLREGRQEDAMRYFAIARATGTPNFVANMDAFLACPGGQGAPAGAGLTA
>Mature_216_residues
MFATVTGLARSGDPAAQLALGQMLLNGIGTAPAPAAALQWFLASAARGVPMACNMVGRCCELGWGVPPSPADAMQWYERA
ARAGLDWGMYNYATGLALGWTAPPDLARALEWFRRAASLGHCKSFNIIGGFYEDGWAVPRDPRRARACYARAARGGDFRG
CFNLGRFLLREGRQEDAMRYFAIARATGTPNFVANMDAFLACPGGQGAPAGAGLTA

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Escherichia coli, GI87081769, Length=187, Percent_Identity=29.4117647058824, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 22913; Mature: 22913

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFATVTGLARSGDPAAQLALGQMLLNGIGTAPAPAAALQWFLASAARGVPMACNMVGRCC
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
ELGWGVPPSPADAMQWYERAARAGLDWGMYNYATGLALGWTAPPDLARALEWFRRAASLG
HHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC
HCKSFNIIGGFYEDGWAVPRDPRRARACYARAARGGDFRGCFNLGRFLLREGRQEDAMRY
CCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHH
FAIARATGTPNFVANMDAFLACPGGQGAPAGAGLTA
HHHHHCCCCCCHHHCCCCEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MFATVTGLARSGDPAAQLALGQMLLNGIGTAPAPAAALQWFLASAARGVPMACNMVGRCC
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
ELGWGVPPSPADAMQWYERAARAGLDWGMYNYATGLALGWTAPPDLARALEWFRRAASLG
HHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC
HCKSFNIIGGFYEDGWAVPRDPRRARACYARAARGGDFRGCFNLGRFLLREGRQEDAMRY
CCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHH
FAIARATGTPNFVANMDAFLACPGGQGAPAGAGLTA
HHHHHCCCCCCHHHCCCCEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]