| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is hemH [H]
Identifier: 162147117
GI number: 162147117
Start: 1323188
End: 1324216
Strand: Reverse
Name: hemH [H]
Synonym: GDI_1322
Alternate gene names: 162147117
Gene position: 1324216-1323188 (Counterclockwise)
Preceding gene: 162147118
Following gene: 162147112
Centisome position: 33.57
GC content: 69.29
Gene sequence:
>1029_bases ATGACCTTCCTGACCATTCGCCCGGCTAAGCCGATCGCCCCGTCCCGTATCGGCGTCCTGCTGACCAATCTGGGCACGCC GGAAGGAACCGGCTATGGCGCCATCCGGCGCTATCTTTCCGAATTCCTGTCCGACCGCCGCATCATCGAGGCCAGTCCCG CCCTGTGGCAGCCGATCCTGCAGGGACCGCTGCTGGCCCTGCGCCCCAGGCGGACCGGGGCGGCCTATCGGCGCATCTGG CATACCGAGCGGGACGAGAGCCCGCTGCGCACCCATACAAGGGCCCAGGCCGAGGCCCTGGCCGCGCGCATGGAACCGGA CGGCGTGGCGGTGGAATGGGCCATGCGCTACGGCACCCCGTCGATCGCATCGGGCATCGAACGGCTGCTGGCCCGGGGCT GCGCGCGGGTGCTGCTGCTGCCGCTTTATCCGCAATACAGCGCCACGACGACGGCCACGGCCAACGACCATGCCTTTCGC GCGCTGATGCGGCTGCGCAACCAGCCGGCGGTCCGCACCGCGCCGTCCTTCCCCGACCATCCGCTCTATATCGAAGCCCT GGCCCGGTCGGTGCGCGAGACGCTGGCCGGCCTGCCCTTCGTGCCGCAACGGATCGTGGCGTCGTTCCATGGCCTGCCGC GCGATTATGTCACGCGCGGCGACCCGTATCCCGAGGAATGCGAGCGCACGCTGGCGGCGCTGCGCCGGGCGCTGGACATG GACGAGGAGACGATGACGCTGACCTATCAGTCGCGCTTCGGCCCCGCCCGATGGCTGGAACCCTATACCGCGCCGCTGGT CGCCGGATTGCCCGCCCGGGGCGTCACGCGTGTCGCCGTCATCATGCCGGGCTTCATGGCCGACTGCATCGAGACGCTGG ACGAGATCGGCAACGAGGTCCGGAAGGACTTCATTGCCGCCGGCGGAACCGATTTCGCGCTGGTTCCCTGCCTGAACGCG GCGCCGGCCGCCATTGACCTGCTGGAAGGCCTGACGCGCCAGGAACTGGCGGGATGGTTGAAGGATTGA
Upstream 100 bases:
>100_bases GCGGTGCCGGTCCGGGTCCGCCGCACCCGCCGCTAGGTTCGGTTTCGGACCACGAACGGCTCTTTGCAGGATGGGCGTCA TCCTGTAGCGTTCCGGGCCG
Downstream 100 bases:
>100_bases AGCGGGCGGGGACAGAAAGTCCCCGCCCGCTTCACCCGGTCAGTGACCGGCGGCGGCCGGCGGATGTTCGGCGTCCCACA GGGTCGCCTTCTGTTCGTCG
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MTFLTIRPAKPIAPSRIGVLLTNLGTPEGTGYGAIRRYLSEFLSDRRIIEASPALWQPILQGPLLALRPRRTGAAYRRIW HTERDESPLRTHTRAQAEALAARMEPDGVAVEWAMRYGTPSIASGIERLLARGCARVLLLPLYPQYSATTTATANDHAFR ALMRLRNQPAVRTAPSFPDHPLYIEALARSVRETLAGLPFVPQRIVASFHGLPRDYVTRGDPYPEECERTLAALRRALDM DEETMTLTYQSRFGPARWLEPYTAPLVAGLPARGVTRVAVIMPGFMADCIETLDEIGNEVRKDFIAAGGTDFALVPCLNA APAAIDLLEGLTRQELAGWLKD
Sequences:
>Translated_342_residues MTFLTIRPAKPIAPSRIGVLLTNLGTPEGTGYGAIRRYLSEFLSDRRIIEASPALWQPILQGPLLALRPRRTGAAYRRIW HTERDESPLRTHTRAQAEALAARMEPDGVAVEWAMRYGTPSIASGIERLLARGCARVLLLPLYPQYSATTTATANDHAFR ALMRLRNQPAVRTAPSFPDHPLYIEALARSVRETLAGLPFVPQRIVASFHGLPRDYVTRGDPYPEECERTLAALRRALDM DEETMTLTYQSRFGPARWLEPYTAPLVAGLPARGVTRVAVIMPGFMADCIETLDEIGNEVRKDFIAAGGTDFALVPCLNA APAAIDLLEGLTRQELAGWLKD >Mature_341_residues TFLTIRPAKPIAPSRIGVLLTNLGTPEGTGYGAIRRYLSEFLSDRRIIEASPALWQPILQGPLLALRPRRTGAAYRRIWH TERDESPLRTHTRAQAEALAARMEPDGVAVEWAMRYGTPSIASGIERLLARGCARVLLLPLYPQYSATTTATANDHAFRA LMRLRNQPAVRTAPSFPDHPLYIEALARSVRETLAGLPFVPQRIVASFHGLPRDYVTRGDPYPEECERTLAALRRALDMD EETMTLTYQSRFGPARWLEPYTAPLVAGLPARGVTRVAVIMPGFMADCIETLDEIGNEVRKDFIAAGGTDFALVPCLNAA PAAIDLLEGLTRQELAGWLKD
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499021, Length=322, Percent_Identity=25.776397515528, Blast_Score=102, Evalue=7e-22, Organism=Homo sapiens, GI60499025, Length=322, Percent_Identity=25.776397515528, Blast_Score=102, Evalue=7e-22, Organism=Escherichia coli, GI1786681, Length=318, Percent_Identity=40.5660377358491, Blast_Score=228, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6324750, Length=336, Percent_Identity=25.297619047619, Blast_Score=84, Evalue=3e-17, Organism=Drosophila melanogaster, GI17864156, Length=341, Percent_Identity=26.099706744868, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI24651774, Length=265, Percent_Identity=26.7924528301887, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 37812; Mature: 37681
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFLTIRPAKPIAPSRIGVLLTNLGTPEGTGYGAIRRYLSEFLSDRRIIEASPALWQPIL CCEEEECCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCHHHHHHHH QGPLLALRPRRTGAAYRRIWHTERDESPLRTHTRAQAEALAARMEPDGVAVEWAMRYGTP HCCCEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHCCH SIASGIERLLARGCARVLLLPLYPQYSATTTATANDHAFRALMRLRNQPAVRTAPSFPDH HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC PLYIEALARSVRETLAGLPFVPQRIVASFHGLPRDYVTRGDPYPEECERTLAALRRALDM CHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCC DEETMTLTYQSRFGPARWLEPYTAPLVAGLPARGVTRVAVIMPGFMADCIETLDEIGNEV CCCCEEEEECCCCCCHHHCCCHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHH RKDFIAAGGTDFALVPCLNAAPAAIDLLEGLTRQELAGWLKD HHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TFLTIRPAKPIAPSRIGVLLTNLGTPEGTGYGAIRRYLSEFLSDRRIIEASPALWQPIL CEEEECCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCHHHHHHHH QGPLLALRPRRTGAAYRRIWHTERDESPLRTHTRAQAEALAARMEPDGVAVEWAMRYGTP HCCCEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHCCH SIASGIERLLARGCARVLLLPLYPQYSATTTATANDHAFRALMRLRNQPAVRTAPSFPDH HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC PLYIEALARSVRETLAGLPFVPQRIVASFHGLPRDYVTRGDPYPEECERTLAALRRALDM CHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCC DEETMTLTYQSRFGPARWLEPYTAPLVAGLPARGVTRVAVIMPGFMADCIETLDEIGNEV CCCCEEEEECCCCCCHHHCCCHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHH RKDFIAAGGTDFALVPCLNAAPAAIDLLEGLTRQELAGWLKD HHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA