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The map label for this gene is dedA [C]

Identifier: 162147028

GI number: 162147028

Start: 1225658

End: 1226365

Strand: Reverse

Name: dedA [C]

Synonym: GDI_1233

Alternate gene names: 162147028

Gene position: 1226365-1225658 (Counterclockwise)

Preceding gene: 162147030

Following gene: 162147027

Centisome position: 31.09

GC content: 63.42

Gene sequence:

>708_bases
TTGACACGGAGCCGGCCAGACGGTTCCTCAGCCTGTTCTTCGCAACAGGTCAGGTCCGGTCCGCTGGTTCATCAGTTCGA
ATCCCTCTTCATCCAGTACGGATACGGCGTGATCGGCGTGATCGTCATGCTGGAAAGCATGGGCCTGCCGCTGCCGGCCG
AAACGCTGATCATATCGTCCGCCCTGTATTGCGCGGCCACGCACCGGCTGGATATCGGCTGGGTCGCGGTGGCGGCCGTC
CTGGGTGCCATCATGGGGGACAATTTCGGCTATCTGATCGGGCGCACATACGGCTATCGCCTGCTGGAACGGCACGGGTC
GAAAGTCTACCTGACGTCTCAGCGCCTGATGCTGGGACGCTACCTGTTCCGCCGCCATGGCGGCAAGGTGGTCTTCTTCG
GCCGATTCATCGCCATCCTGCGGGTCTTCGTGGCCCTGCTGGCGGGCGCGAACCACATGCCATGGCACACGTTTTTGCTG
TTCAACGCGCTGGGCGGCATCGGCTGGGCGGGTGGATACGCCTATGGTGCCTATTTCCTGGGCCATCAGGTGCTGAGCAT
TTCGGGTCCCGTCGGGGTCGCCCTGGGCGTGCTCGCGACGCTGGTCATCGGCGGCAGTTTCGTCTTCCTGAAGAAGAACG
AACGGCGCCTGACCGAGGAAGCGACCCGGGAGGCCGAACGGGAACAGCAGAAGGAGCCTGCGCGATGA

Upstream 100 bases:

>100_bases
CCAGGTGCCAAAGGGCTGCGTCAGGACGGACGCCCCCTTCGCGACGGTCGGATCTGTCATGTGTGTACTCCTGTTCCGCT
GTTCCGTTCGTCGTATTGAC

Downstream 100 bases:

>100_bases
GCGTACCCCTGAAATGGACGATCGACCGTGCCCCCGACCTGACCGGCCGCGTCGCCGTGGTGACGGGGGCGACCGGCGGG
CTAGGGTACGAGACCGCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MTRSRPDGSSACSSQQVRSGPLVHQFESLFIQYGYGVIGVIVMLESMGLPLPAETLIISSALYCAATHRLDIGWVAVAAV
LGAIMGDNFGYLIGRTYGYRLLERHGSKVYLTSQRLMLGRYLFRRHGGKVVFFGRFIAILRVFVALLAGANHMPWHTFLL
FNALGGIGWAGGYAYGAYFLGHQVLSISGPVGVALGVLATLVIGGSFVFLKKNERRLTEEATREAEREQQKEPAR

Sequences:

>Translated_235_residues
MTRSRPDGSSACSSQQVRSGPLVHQFESLFIQYGYGVIGVIVMLESMGLPLPAETLIISSALYCAATHRLDIGWVAVAAV
LGAIMGDNFGYLIGRTYGYRLLERHGSKVYLTSQRLMLGRYLFRRHGGKVVFFGRFIAILRVFVALLAGANHMPWHTFLL
FNALGGIGWAGGYAYGAYFLGHQVLSISGPVGVALGVLATLVIGGSFVFLKKNERRLTEEATREAEREQQKEPAR
>Mature_234_residues
TRSRPDGSSACSSQQVRSGPLVHQFESLFIQYGYGVIGVIVMLESMGLPLPAETLIISSALYCAATHRLDIGWVAVAAVL
GAIMGDNFGYLIGRTYGYRLLERHGSKVYLTSQRLMLGRYLFRRHGGKVVFFGRFIAILRVFVALLAGANHMPWHTFLLF
NALGGIGWAGGYAYGAYFLGHQVLSISGPVGVALGVLATLVIGGSFVFLKKNERRLTEEATREAEREQQKEPAR

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=132, Percent_Identity=32.5757575757576, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 25745; Mature: 25614

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSRPDGSSACSSQQVRSGPLVHQFESLFIQYGYGVIGVIVMLESMGLPLPAETLIISS
CCCCCCCCCHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
ALYCAATHRLDIGWVAVAAVLGAIMGDNFGYLIGRTYGYRLLERHGSKVYLTSQRLMLGR
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCEEEEEHHHHHHHH
YLFRRHGGKVVFFGRFIAILRVFVALLAGANHMPWHTFLLFNALGGIGWAGGYAYGAYFL
HHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
GHQVLSISGPVGVALGVLATLVIGGSFVFLKKNERRLTEEATREAEREQQKEPAR
HHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TRSRPDGSSACSSQQVRSGPLVHQFESLFIQYGYGVIGVIVMLESMGLPLPAETLIISS
CCCCCCCCHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
ALYCAATHRLDIGWVAVAAVLGAIMGDNFGYLIGRTYGYRLLERHGSKVYLTSQRLMLGR
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCEEEEEHHHHHHHH
YLFRRHGGKVVFFGRFIAILRVFVALLAGANHMPWHTFLLFNALGGIGWAGGYAYGAYFL
HHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
GHQVLSISGPVGVALGVLATLVIGGSFVFLKKNERRLTEEATREAEREQQKEPAR
HHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]