Click here to switch to the map view.

The map label for this gene is parB [H]

Identifier: 162147020

GI number: 162147020

Start: 1217477

End: 1218367

Strand: Reverse

Name: parB [H]

Synonym: GDI_1225

Alternate gene names: 162147020

Gene position: 1218367-1217477 (Counterclockwise)

Preceding gene: 162147021

Following gene: 162147019

Centisome position: 30.89

GC content: 69.81

Gene sequence:

>891_bases
ATGAGCACGAAGAAGGATCAGGCCCGTCCGCGCCTGGGCCGGGGCCTGGCGGCATTGCTGGGCGATCAGGCGCCCACCGC
CATCGCCCGCGTTTCGGGCCGCACAGAACAGGACCGCGCGGGCACGCTGCCGGTCGACCTGCTGGAACCCGGACCGTTCC
AGCCGCGCCAGGTCATGGAACCCGATGCCCTGGCGGAACTGGCGGATTCGATCCGCACGCGCGGCATCCTGCAGCCGATC
CTCGTGCGGCCGCACCCCGACCACGCCGATCGCTACCAGATCATTGCCGGCGAACGCCGCTGGCGCGCGGCCCAGATGGC
ATCCCTGCACGAGGTCCCGGTCCATATCCGCGTCCTGGATGACGGGGACGCCATGGCCGCGGCCCTGGTCGAAAACCTGC
AACGCGCCGACCTGAACGCGATCGAGGAAGCCGAGGGCCTGCAGCGCCTGCTGCAGGATTACAGCCTGACGCAGGAAGAA
CTGGCCGGCGCGCTGGGCAAGTCGCGCTCGCACGTCGCGAATATGGTCCGGCTGCTGAACCTGCCGCCGCCGGTGCGCGC
GGCACTGCGCGACGGCAAGCTGACGGCGGGCCATGCCCGCGCGCTGCTGGGCCATCCCGACCCGGTCGCGGCCCTGAAAA
TCGTGCTGGAGCAGGGGCTGAACGTCCGCCAGACCGAGGCCCTGATCCAGAAGGCCACCCGCCAGCAGCAGCAGGCCCCC
GCCAAGGCCGCCGAACGCAAGGACCCGGAAATCCAGGTCCTGGAACGCGACCTGTCCGCGCGATTGGGGCTGAAGGTGCA
GATCGCCTTTGACGGGCGGGGCGGGTCGATCCGTATCCTGTACCATTCGCTGGATCAGTTCGATACGGTCCTGGCGCGGC
TGAACGGGTGA

Upstream 100 bases:

>100_bases
ATGATGCGAAATCCAGCGGTGCCATGGCCTATCAGGCGATGGCCAAGGAACTGATCGCCCGCATGAAGCTGGCGAAACCG
AAAGGGAAGGCGGTCCGGGC

Downstream 100 bases:

>100_bases
GGTCGAGGCATGGTCCTTCGGAACCATGCCGACCGACCGATATGACAATACAGGGAATTTTTTTCGATAAACCGCTTGCC
CTGTTCCCGATGCGCTGTTA

Product: chromosome partitioning protein parB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MSTKKDQARPRLGRGLAALLGDQAPTAIARVSGRTEQDRAGTLPVDLLEPGPFQPRQVMEPDALAELADSIRTRGILQPI
LVRPHPDHADRYQIIAGERRWRAAQMASLHEVPVHIRVLDDGDAMAAALVENLQRADLNAIEEAEGLQRLLQDYSLTQEE
LAGALGKSRSHVANMVRLLNLPPPVRAALRDGKLTAGHARALLGHPDPVAALKIVLEQGLNVRQTEALIQKATRQQQQAP
AKAAERKDPEIQVLERDLSARLGLKVQIAFDGRGGSIRILYHSLDQFDTVLARLNG

Sequences:

>Translated_296_residues
MSTKKDQARPRLGRGLAALLGDQAPTAIARVSGRTEQDRAGTLPVDLLEPGPFQPRQVMEPDALAELADSIRTRGILQPI
LVRPHPDHADRYQIIAGERRWRAAQMASLHEVPVHIRVLDDGDAMAAALVENLQRADLNAIEEAEGLQRLLQDYSLTQEE
LAGALGKSRSHVANMVRLLNLPPPVRAALRDGKLTAGHARALLGHPDPVAALKIVLEQGLNVRQTEALIQKATRQQQQAP
AKAAERKDPEIQVLERDLSARLGLKVQIAFDGRGGSIRILYHSLDQFDTVLARLNG
>Mature_295_residues
STKKDQARPRLGRGLAALLGDQAPTAIARVSGRTEQDRAGTLPVDLLEPGPFQPRQVMEPDALAELADSIRTRGILQPIL
VRPHPDHADRYQIIAGERRWRAAQMASLHEVPVHIRVLDDGDAMAAALVENLQRADLNAIEEAEGLQRLLQDYSLTQEEL
AGALGKSRSHVANMVRLLNLPPPVRAALRDGKLTAGHARALLGHPDPVAALKIVLEQGLNVRQTEALIQKATRQQQQAPA
KAAERKDPEIQVLERDLSARLGLKVQIAFDGRGGSIRILYHSLDQFDTVLARLNG

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 32380; Mature: 32248

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKKDQARPRLGRGLAALLGDQAPTAIARVSGRTEQDRAGTLPVDLLEPGPFQPRQVME
CCCCCHHHCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCEECCCCCCCCCHHCCC
PDALAELADSIRTRGILQPILVRPHPDHADRYQIIAGERRWRAAQMASLHEVPVHIRVLD
HHHHHHHHHHHHHHCCHHHHEECCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEC
DGDAMAAALVENLQRADLNAIEEAEGLQRLLQDYSLTQEELAGALGKSRSHVANMVRLLN
CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHC
LPPPVRAALRDGKLTAGHARALLGHPDPVAALKIVLEQGLNVRQTEALIQKATRQQQQAP
CCCHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCH
AKAAERKDPEIQVLERDLSARLGLKVQIAFDGRGGSIRILYHSLDQFDTVLARLNG
HHHHHCCCCHHHHHHHHHHHHCCEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STKKDQARPRLGRGLAALLGDQAPTAIARVSGRTEQDRAGTLPVDLLEPGPFQPRQVME
CCCCHHHCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCEECCCCCCCCCHHCCC
PDALAELADSIRTRGILQPILVRPHPDHADRYQIIAGERRWRAAQMASLHEVPVHIRVLD
HHHHHHHHHHHHHHCCHHHHEECCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEC
DGDAMAAALVENLQRADLNAIEEAEGLQRLLQDYSLTQEELAGALGKSRSHVANMVRLLN
CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHC
LPPPVRAALRDGKLTAGHARALLGHPDPVAALKIVLEQGLNVRQTEALIQKATRQQQQAP
CCCHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCH
AKAAERKDPEIQVLERDLSARLGLKVQIAFDGRGGSIRILYHSLDQFDTVLARLNG
HHHHHCCCCHHHHHHHHHHHHCCEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]