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The map label for this gene is 162147008

Identifier: 162147008

GI number: 162147008

Start: 1203848

End: 1204297

Strand: Reverse

Name: 162147008

Synonym: GDI_1213

Alternate gene names: NA

Gene position: 1204297-1203848 (Counterclockwise)

Preceding gene: 162147009

Following gene: 162147007

Centisome position: 30.53

GC content: 60.0

Gene sequence:

>450_bases
TTGATCCTGGGTTTCCTGCCCTGGCTGGCATGGTTCAAGGCGCTGCATGTGATGTCGCTGATCGCATGGATGGCCGGCCT
GTTCTACCTGCCGCGCCTGTTCGTCTATCACTGCCAGGTGGACCCTGCATCGGCCGAGAGTGCCCGCTTCAAGGTGATGG
AACGCAAGCTGCTGCGACAGATCATGACGCCCGCCATGCTCTGCACCTTCCTGTTCGGCATCCTGCTGGCGCTGACGCCG
GGTACCGTCGATTGGCATGCCGGCTGGTGGTACACCAAAATTGCCGCCGTACTGGGCCTGGCGGGTTTTCATGGCGCCTG
CGCCGGCTGGCGGCGGGGGTTCGAGCAGGACCGTAATACGCGATCCGAAAAATTTTACCGTGCGGCTAACGAAATTCCGA
CCGTGCTGATGATGGTCGTCGTTATCATGGTGATTGTTCGTCCCTTTTGA

Upstream 100 bases:

>100_bases
CGCCCGACTGGCCGGGGCTGTTCCGTATCGCGCATCTGTCCGAATTCGCGCCGTTGCTGGAACGGATCCTGGCGGCGCAG
GCATCAGGCGGAACACGGTC

Downstream 100 bases:

>100_bases
AGGGGTTCTCCTTCTTCAGAAAAAAGAAGGGAGAACGCCACGCAGGAGGATGGAATGACAGATCATGTATTCAGCTCCGA
CCGGTTGAGCGTCCGGGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MILGFLPWLAWFKALHVMSLIAWMAGLFYLPRLFVYHCQVDPASAESARFKVMERKLLRQIMTPAMLCTFLFGILLALTP
GTVDWHAGWWYTKIAAVLGLAGFHGACAGWRRGFEQDRNTRSEKFYRAANEIPTVLMMVVVIMVIVRPF

Sequences:

>Translated_149_residues
MILGFLPWLAWFKALHVMSLIAWMAGLFYLPRLFVYHCQVDPASAESARFKVMERKLLRQIMTPAMLCTFLFGILLALTP
GTVDWHAGWWYTKIAAVLGLAGFHGACAGWRRGFEQDRNTRSEKFYRAANEIPTVLMMVVVIMVIVRPF
>Mature_149_residues
MILGFLPWLAWFKALHVMSLIAWMAGLFYLPRLFVYHCQVDPASAESARFKVMERKLLRQIMTPAMLCTFLFGILLALTP
GTVDWHAGWWYTKIAAVLGLAGFHGACAGWRRGFEQDRNTRSEKFYRAANEIPTVLMMVVVIMVIVRPF

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR005265 [H]

Pfam domain/function: PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 17085; Mature: 17085

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILGFLPWLAWFKALHVMSLIAWMAGLFYLPRLFVYHCQVDPASAESARFKVMERKLLRQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
IMTPAMLCTFLFGILLALTPGTVDWHAGWWYTKIAAVLGLAGFHGACAGWRRGFEQDRNT
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSEKFYRAANEIPTVLMMVVVIMVIVRPF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MILGFLPWLAWFKALHVMSLIAWMAGLFYLPRLFVYHCQVDPASAESARFKVMERKLLRQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
IMTPAMLCTFLFGILLALTPGTVDWHAGWWYTKIAAVLGLAGFHGACAGWRRGFEQDRNT
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSEKFYRAANEIPTVLMMVVVIMVIVRPF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8606169 [H]