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The map label for this gene is ydfJ [H]

Identifier: 162146994

GI number: 162146994

Start: 1192946

End: 1194247

Strand: Reverse

Name: ydfJ [H]

Synonym: GDI_1199

Alternate gene names: 162146994

Gene position: 1194247-1192946 (Counterclockwise)

Preceding gene: 162146995

Following gene: 162146993

Centisome position: 30.28

GC content: 64.82

Gene sequence:

>1302_bases
CTGGACCAGTTCGCTGGGCAGTGCGCTGGAATATTACGATTTTGCCTTGTACAGCCTGGCGGCGGCCTGGTCTTCGGGCC
GCTGTTCTTCCCGCACCAGGGGACCAGCATCGGGCTGATCGCCAGTTTCGCGACCTATTTCCTGGGGTTTGCCGTTCGCC
CCATCGGCGGAATCCTGTTCGGCATGGTGGGCGACCGGTTCGGGCGCAAGCTCGTCCTGCTGCTGACGGTGACGCTGATG
GGCGGTGCCAGCACCGCCATCGGCCTGGTTCCCACCTATCAGACCATCGGTATCTGGGCGCCGATCCTGCTGATCGTGCT
GCGCCTGTTGCAGGGTCTGGGCGCGGGGGCGGAGCAGGCGGGTGCGGCCGTGCTGATGACGGAATATGCCCCCAAGGGCA
GGCGGGGTTTCTATGCCGCCCTGCCGTTCCTGGGCATCCAGATCGGGACCGTGATCGCCGCCATCGTCTATTTCGCGCTG
CTGTTCCACGTGACCAATGTACTGCAGAGCTGGCTGTGGCGCCTGCCGTTCCTGCTGAGTTCCGTCATCCTGATCATCGC
GCTTTATATGCGATTCAACCTCAAGGAATCGCCGGCTTTCGCGGAAATCGAGGAAGAGGAACATGCCCGGGCCATGTCCC
TGCCCGAAGTGGTCCGGGAATCGTGGAAGACGATCCTGCTGGGCATGGGCCTGCGCATGGCCGAGAATGGCGGATCTTCG
ATCTATCAGGTCCTGGCCGTCAGTTATTCGGTCAATGTCGTGGGTATGCGCAATGCGACCGGCGCGCTGTCGCTGCTGTG
CGCCGCGATCGTGGGGGCTTTCGTGGTGCCGGCCGCCGGCCTGCTCAGCGACCGGTTCGGGCGCATTCCCGTCTATCGCG
GGTTCGCCATCCTGCAGATGCTGGCCGCCCTTCCGGTCTGGTACGCGCTCAGCTTCGGCTATCTGCCGCTGACGATCGCG
GCGCTGTCGCTGGCGCTGGGCTGTGCCACCTGGGGCATGTTCGGTACCCAGGGCGCGCTGCTGCCGGAAATGTTCGGGTC
CCGCCATCGGTATCTGGGCGTTTCCCTGACGCGTGAGGTTTCGGCCGTGCTGTCCGGCGGTATCGCGCCGCTGGTCGGGT
CCGTGATTATCGCGGTGGTGACCAGCCACGATGCCGGTGCGGCCCGTCCCGGCCTGATCGCCTGGGTGCCGCTGGCACTG
TATGTGATGGTGCTGGCGGCCATCACGATCGTGACCACGCTGTTCGCCCCCGAACCGCGTGACCGTGATTTGCTGGACCG
GCGTGACCTGATCAATAGCTAG

Upstream 100 bases:

>100_bases
TGGCCCAGGCAGGCGTCCCCCCGGGCCGGTCCCGCACGCCGAACCGCGAGATGGAGCTGTCGCGCCCCGAGGTCACCACG
GCCGACCTGCGCCGCGCGGC

Downstream 100 bases:

>100_bases
GGTGTGGGTCCTCGTTCTTTCTTGAATACAGAAGATTCCATCTTCCCTGGGCAGCACAGGAGCATGTGTGTGACCGTTTC
CACCGACCCACTGGTTGATC

Product: sugar transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MDQFAGQCAGILRFCLVQPGGGLVFGPLFFPHQGTSIGLIASFATYFLGFAVRPIGGILFGMVGDRFGRKLVLLLTVTLM
GGASTAIGLVPTYQTIGIWAPILLIVLRLLQGLGAGAEQAGAAVLMTEYAPKGRRGFYAALPFLGIQIGTVIAAIVYFAL
LFHVTNVLQSWLWRLPFLLSSVILIIALYMRFNLKESPAFAEIEEEEHARAMSLPEVVRESWKTILLGMGLRMAENGGSS
IYQVLAVSYSVNVVGMRNATGALSLLCAAIVGAFVVPAAGLLSDRFGRIPVYRGFAILQMLAALPVWYALSFGYLPLTIA
ALSLALGCATWGMFGTQGALLPEMFGSRHRYLGVSLTREVSAVLSGGIAPLVGSVIIAVVTSHDAGAARPGLIAWVPLAL
YVMVLAAITIVTTLFAPEPRDRDLLDRRDLINS

Sequences:

>Translated_433_residues
MDQFAGQCAGILRFCLVQPGGGLVFGPLFFPHQGTSIGLIASFATYFLGFAVRPIGGILFGMVGDRFGRKLVLLLTVTLM
GGASTAIGLVPTYQTIGIWAPILLIVLRLLQGLGAGAEQAGAAVLMTEYAPKGRRGFYAALPFLGIQIGTVIAAIVYFAL
LFHVTNVLQSWLWRLPFLLSSVILIIALYMRFNLKESPAFAEIEEEEHARAMSLPEVVRESWKTILLGMGLRMAENGGSS
IYQVLAVSYSVNVVGMRNATGALSLLCAAIVGAFVVPAAGLLSDRFGRIPVYRGFAILQMLAALPVWYALSFGYLPLTIA
ALSLALGCATWGMFGTQGALLPEMFGSRHRYLGVSLTREVSAVLSGGIAPLVGSVIIAVVTSHDAGAARPGLIAWVPLAL
YVMVLAAITIVTTLFAPEPRDRDLLDRRDLINS
>Mature_433_residues
MDQFAGQCAGILRFCLVQPGGGLVFGPLFFPHQGTSIGLIASFATYFLGFAVRPIGGILFGMVGDRFGRKLVLLLTVTLM
GGASTAIGLVPTYQTIGIWAPILLIVLRLLQGLGAGAEQAGAAVLMTEYAPKGRRGFYAALPFLGIQIGTVIAAIVYFAL
LFHVTNVLQSWLWRLPFLLSSVILIIALYMRFNLKESPAFAEIEEEEHARAMSLPEVVRESWKTILLGMGLRMAENGGSS
IYQVLAVSYSVNVVGMRNATGALSLLCAAIVGAFVVPAAGLLSDRFGRIPVYRGFAILQMLAALPVWYALSFGYLPLTIA
ALSLALGCATWGMFGTQGALLPEMFGSRHRYLGVSLTREVSAVLSGGIAPLVGSVIIAVVTSHDAGAARPGLIAWVPLAL
YVMVLAAITIVTTLFAPEPRDRDLLDRRDLINS

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Escherichia coli, GI1788292, Length=428, Percent_Identity=32.2429906542056, Blast_Score=198, Evalue=4e-52,
Organism=Escherichia coli, GI1790550, Length=413, Percent_Identity=30.9927360774818, Blast_Score=191, Evalue=6e-50,
Organism=Escherichia coli, GI1789941, Length=426, Percent_Identity=33.5680751173709, Blast_Score=174, Evalue=8e-45,
Organism=Escherichia coli, GI1788942, Length=357, Percent_Identity=32.7731092436975, Blast_Score=142, Evalue=5e-35,
Organism=Escherichia coli, GI87082231, Length=317, Percent_Identity=27.7602523659306, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004736
- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR005828 [H]

Pfam domain/function: PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 46180; Mature: 46180

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQFAGQCAGILRFCLVQPGGGLVFGPLFFPHQGTSIGLIASFATYFLGFAVRPIGGILF
CCCHHHHHHHHHHHHHCCCCCCEEECCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GMVGDRFGRKLVLLLTVTLMGGASTAIGLVPTYQTIGIWAPILLIVLRLLQGLGAGAEQA
HHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHC
GAAVLMTEYAPKGRRGFYAALPFLGIQIGTVIAAIVYFALLFHVTNVLQSWLWRLPFLLS
CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVILIIALYMRFNLKESPAFAEIEEEEHARAMSLPEVVRESWKTILLGMGLRMAENGGSS
HHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCEECCCCHH
IYQVLAVSYSVNVVGMRNATGALSLLCAAIVGAFVVPAAGLLSDRFGRIPVYRGFAILQM
HHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LAALPVWYALSFGYLPLTIAALSLALGCATWGMFGTQGALLPEMFGSRHRYLGVSLTREV
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEECHHHHHHH
SAVLSGGIAPLVGSVIIAVVTSHDAGAARPGLIAWVPLALYVMVLAAITIVTTLFAPEPR
HHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DRDLLDRRDLINS
CCHHHHHHHHCCC
>Mature Secondary Structure
MDQFAGQCAGILRFCLVQPGGGLVFGPLFFPHQGTSIGLIASFATYFLGFAVRPIGGILF
CCCHHHHHHHHHHHHHCCCCCCEEECCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GMVGDRFGRKLVLLLTVTLMGGASTAIGLVPTYQTIGIWAPILLIVLRLLQGLGAGAEQA
HHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHC
GAAVLMTEYAPKGRRGFYAALPFLGIQIGTVIAAIVYFALLFHVTNVLQSWLWRLPFLLS
CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVILIIALYMRFNLKESPAFAEIEEEEHARAMSLPEVVRESWKTILLGMGLRMAENGGSS
HHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCEECCCCHH
IYQVLAVSYSVNVVGMRNATGALSLLCAAIVGAFVVPAAGLLSDRFGRIPVYRGFAILQM
HHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LAALPVWYALSFGYLPLTIAALSLALGCATWGMFGTQGALLPEMFGSRHRYLGVSLTREV
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEECHHHHHHH
SAVLSGGIAPLVGSVIIAVVTSHDAGAARPGLIAWVPLALYVMVLAAITIVTTLFAPEPR
HHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DRDLLDRRDLINS
CCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]