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The map label for this gene is yvfU [H]

Identifier: 162146990

GI number: 162146990

Start: 1189861

End: 1190466

Strand: Direct

Name: yvfU [H]

Synonym: GDI_1195

Alternate gene names: 162146990

Gene position: 1189861-1190466 (Clockwise)

Preceding gene: 162146989

Following gene: 162146997

Centisome position: 30.17

GC content: 70.3

Gene sequence:

>606_bases
ATGATCCGTCTTGTCATCGCCGAAGACCAGACGCTCGTGCTCGGGGCCATCGCCGCCCTGCTGGAACTGGAAGACGACCT
GACCATCATCGGCCGCGCGAAGGACGGAACGGCGGCGCTGGACCTTGTCCGCACCCTCGTCCCCGACATCCTGCTGACCG
ATATCGAAATGCCGGGCCCGAGCGGCATCGACGTCGCGCGAGATATCGCCGCGGCCAGCCTGCCGACACGCACGATCATC
GTCACCACCTTCGCGCGCCCCGGCTACCTCGCCCGCGCCCGCACCGCCGGAGTACGCGGCTACCTTCTGAAGGACGCCCC
GGTGGAACAGCTTGCCGCCGCCATCCGCACCGTCGCCACGGGCGGGACCTTCATTCCCCCCGACCTCATGGCCGCCGCCT
GGGACGCCGGCGCCGACCCGCTGACCGCCCGCGAACGCGACGCGCTCCGCCTTGCGGAAGAAGGCCTTTCCAACAAGGAC
ATCGCCCGCCGCCTGGGCCTGTCGCCCGGCACCGTGCGCAACTACCTCTCGACCGCCGCTGGCAAGCTCAACGCCGCCAA
CCGCATCGAAGCCGGGCGGATCGCCCGCGCCAACGGATGGCTGTAG

Upstream 100 bases:

>100_bases
TGCGCCAGAGGCTGGCGGCCGCGGGCGGCGCGCTGGCCTTTCAGCCCGGCACGCCGGAGGCCGGCAGGCAGGGCATCCGG
CTTGTCGCCACGGTGCCCGC

Downstream 100 bases:

>100_bases
ATGTCGGCAAGGACCTTGCCCTTTGAAAACCCATTCGTCCGGGGTGCAGGGCATCATGCCCTGCCGGGTTCGGGCAGAGC
CCGACCTCTCAGCGCCGCTG

Product: two-component system regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MIRLVIAEDQTLVLGAIAALLELEDDLTIIGRAKDGTAALDLVRTLVPDILLTDIEMPGPSGIDVARDIAAASLPTRTII
VTTFARPGYLARARTAGVRGYLLKDAPVEQLAAAIRTVATGGTFIPPDLMAAAWDAGADPLTARERDALRLAEEGLSNKD
IARRLGLSPGTVRNYLSTAAGKLNAANRIEAGRIARANGWL

Sequences:

>Translated_201_residues
MIRLVIAEDQTLVLGAIAALLELEDDLTIIGRAKDGTAALDLVRTLVPDILLTDIEMPGPSGIDVARDIAAASLPTRTII
VTTFARPGYLARARTAGVRGYLLKDAPVEQLAAAIRTVATGGTFIPPDLMAAAWDAGADPLTARERDALRLAEEGLSNKD
IARRLGLSPGTVRNYLSTAAGKLNAANRIEAGRIARANGWL
>Mature_201_residues
MIRLVIAEDQTLVLGAIAALLELEDDLTIIGRAKDGTAALDLVRTLVPDILLTDIEMPGPSGIDVARDIAAASLPTRTII
VTTFARPGYLARARTAGVRGYLLKDAPVEQLAAAIRTVATGGTFIPPDLMAAAWDAGADPLTARERDALRLAEEGLSNKD
IARRLGLSPGTVRNYLSTAAGKLNAANRIEAGRIARANGWL

Specific function: Member of the two-component regulatory system yvfT/yvfU [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790102, Length=200, Percent_Identity=33, Blast_Score=103, Evalue=7e-24,
Organism=Escherichia coli, GI1788222, Length=208, Percent_Identity=28.8461538461538, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1788521, Length=198, Percent_Identity=32.8282828282828, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1786747, Length=194, Percent_Identity=26.2886597938144, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1788712, Length=199, Percent_Identity=27.6381909547739, Blast_Score=79, Evalue=1e-16,
Organism=Escherichia coli, GI1787473, Length=198, Percent_Identity=30.3030303030303, Blast_Score=79, Evalue=1e-16,
Organism=Escherichia coli, GI1788546, Length=197, Percent_Identity=28.4263959390863, Blast_Score=67, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 21174; Mature: 21174

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLVIAEDQTLVLGAIAALLELEDDLTIIGRAKDGTAALDLVRTLVPDILLTDIEMPGP
CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCC
SGIDVARDIAAASLPTRTIIVTTFARPGYLARARTAGVRGYLLKDAPVEQLAAAIRTVAT
CCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC
GGTFIPPDLMAAAWDAGADPLTARERDALRLAEEGLSNKDIARRLGLSPGTVRNYLSTAA
CCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHH
GKLNAANRIEAGRIARANGWL
CCCCCCCCCCCCCEECCCCCC
>Mature Secondary Structure
MIRLVIAEDQTLVLGAIAALLELEDDLTIIGRAKDGTAALDLVRTLVPDILLTDIEMPGP
CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCC
SGIDVARDIAAASLPTRTIIVTTFARPGYLARARTAGVRGYLLKDAPVEQLAAAIRTVAT
CCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC
GGTFIPPDLMAAAWDAGADPLTARERDALRLAEEGLSNKDIARRLGLSPGTVRNYLSTAA
CCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHH
GKLNAANRIEAGRIARANGWL
CCCCCCCCCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]