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The map label for this gene is tetR

Identifier: 162146938

GI number: 162146938

Start: 1136296

End: 1136997

Strand: Direct

Name: tetR

Synonym: GDI_1143

Alternate gene names: NA

Gene position: 1136296-1136997 (Clockwise)

Preceding gene: 162146935

Following gene: 162146941

Centisome position: 28.81

GC content: 72.79

Gene sequence:

>702_bases
GTGCCGCCCTATCGTGCGGCCATGGACCCGTCCCCCCGCCCCTACCATCACGGCAACCTGCGCGCCGCCCTGCTGAAGAC
CGCCGAACGCCTGCTGGAACGCGACGGACCGGCGGCCCTGACCATGCGGGCCATCGCGCGAGAGGCCGGGGTGTCCCATA
CCGCGCCCGCCCATCATTTCGGCGACCTGCCGGGATTGCTGGCCGACCTGGCCGCGACCGGCTTCACCCGCCTGGCCGAG
ACCATGCGCCGCGCCGCGACCGACCCCGCGCCGCGCGCGCCGCTGCATGCCTATGTCCGCTTCGCGCAGGACCATCCGGG
ACTGTACACGCTGATGTTCCGCTCCGACCGGCTCGATTACGGACGGGAGTCGCTGGCCGCCGCATCGCGCGAGGCCTGGA
GCATCCTGTTCCGGTCGGTCGGTTCGGACACCGACAGCGCGGCGCAGGCCGACCTGGCGACGACCGACCTGACGACAACC
GACCTGACGACCCTGGGCCACGTCACCTATCGCTGGTCGCTCCTGCACGGATTCTGCACCCTGCTGCTGGACCGGCGGCT
CGATCCCCTGCTGGCCGCCCCGTCCTGCGGGGGCGATCCGCACGTGCTGCTGGATGCGATGGTCCCCCCGCCGGCAGCGA
CGGCGACGGTCAGGCCGCCACCACCCGCACCGGAATCGACTTCGCCGCCGGGGTGCCGCTGA

Upstream 100 bases:

>100_bases
TCATCGACGTGTTTCCTTCATGACGGAACGATTCCGCCCCGACCCTACCGGATCGGACCGCCCCGATTCCACACGAATCT
TTCCATTGTAAAGATAAGGC

Downstream 100 bases:

>100_bases
TCTCGTCGAAATGGTCCAGCGGCAGCAGGGGGTTGAGTTCGGGGTAATAGCCCGCCACCGCACCGCGCGGCAGGGAATAG
GGCAGCGCGCGCAGGTCGCC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR; TetR-Family Protein Transcriptional Regulator; Regulatory Protein TetR

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MPPYRAAMDPSPRPYHHGNLRAALLKTAERLLERDGPAALTMRAIAREAGVSHTAPAHHFGDLPGLLADLAATGFTRLAE
TMRRAATDPAPRAPLHAYVRFAQDHPGLYTLMFRSDRLDYGRESLAAASREAWSILFRSVGSDTDSAAQADLATTDLTTT
DLTTLGHVTYRWSLLHGFCTLLLDRRLDPLLAAPSCGGDPHVLLDAMVPPPAATATVRPPPPAPESTSPPGCR

Sequences:

>Translated_233_residues
MPPYRAAMDPSPRPYHHGNLRAALLKTAERLLERDGPAALTMRAIAREAGVSHTAPAHHFGDLPGLLADLAATGFTRLAE
TMRRAATDPAPRAPLHAYVRFAQDHPGLYTLMFRSDRLDYGRESLAAASREAWSILFRSVGSDTDSAAQADLATTDLTTT
DLTTLGHVTYRWSLLHGFCTLLLDRRLDPLLAAPSCGGDPHVLLDAMVPPPAATATVRPPPPAPESTSPPGCR
>Mature_232_residues
PPYRAAMDPSPRPYHHGNLRAALLKTAERLLERDGPAALTMRAIAREAGVSHTAPAHHFGDLPGLLADLAATGFTRLAET
MRRAATDPAPRAPLHAYVRFAQDHPGLYTLMFRSDRLDYGRESLAAASREAWSILFRSVGSDTDSAAQADLATTDLTTTD
LTTLGHVTYRWSLLHGFCTLLLDRRLDPLLAAPSCGGDPHVLLDAMVPPPAATATVRPPPPAPESTSPPGCR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25056; Mature: 24924

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPYRAAMDPSPRPYHHGNLRAALLKTAERLLERDGPAALTMRAIAREAGVSHTAPAHHF
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHH
GDLPGLLADLAATGFTRLAETMRRAATDPAPRAPLHAYVRFAQDHPGLYTLMFRSDRLDY
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCC
GRESLAAASREAWSILFRSVGSDTDSAAQADLATTDLTTTDLTTLGHVTYRWSLLHGFCT
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LLLDRRLDPLLAAPSCGGDPHVLLDAMVPPPAATATVRPPPPAPESTSPPGCR
HHHHHCCCHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PPYRAAMDPSPRPYHHGNLRAALLKTAERLLERDGPAALTMRAIAREAGVSHTAPAHHF
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHH
GDLPGLLADLAATGFTRLAETMRRAATDPAPRAPLHAYVRFAQDHPGLYTLMFRSDRLDY
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCC
GRESLAAASREAWSILFRSVGSDTDSAAQADLATTDLTTTDLTTLGHVTYRWSLLHGFCT
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LLLDRRLDPLLAAPSCGGDPHVLLDAMVPPPAATATVRPPPPAPESTSPPGCR
HHHHHCCCHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA