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The map label for this gene is ytfH [C]

Identifier: 162146919

GI number: 162146919

Start: 1112050

End: 1112475

Strand: Reverse

Name: ytfH [C]

Synonym: GDI_1121

Alternate gene names: 162146919

Gene position: 1112475-1112050 (Counterclockwise)

Preceding gene: 162146921

Following gene: 162146917

Centisome position: 28.21

GC content: 64.32

Gene sequence:

>426_bases
TTGGGACAGGGTGAGGCAAAAGTAACCGCCCCGGCATTCGATGCCACCGTCCAATTGTTCGCCGAACGGCAGCCCGGCCA
GCCGGTCGATCCACAATGCCCGGTGCGGGACGTGCTCGATCGCATCGGAGACAAGTGGTCAACGCTGATACTGGGCACCC
TCGCCACCGGCCCGCACCGGTTCAGCGCCGTGCAGCGCGCGATCCCGGACATTTCCAAGCGGATGCTGACGCAGACCCTC
CGCGATCTGGAGCGTGACGGCCTGATCGCGCGCACGGTGTTTCCCACCAAGCCGCCAAGCGTCGAATACCGACTGACGCA
TCTTGGTGTTACGATCTTCGAACCGCTGACCTCCCTTGTCCGATGGGCCAATCAGAGCCATGCCGCCATCCGGGAGGCCC
GTCTGGCGTTCGATCAGGCGTCCTGA

Upstream 100 bases:

>100_bases
AAGAGCGTGGGTGCGGTGGGCATTGTCGGTCTTCCTTGTGGTTCGCAATCGACACAAGGTAATTAAGTGAGACCATAGAC
GGCGTGAAGGAGGCAGGATT

Downstream 100 bases:

>100_bases
AGCTGTTCCAGATCGGTAATCAGCCCCTGGCCGGTCGGTGCCCATCCCAATGCCTGCAGCGTCAGTGCGCTGGAGGCGCG
CATGTCGAAGCCAGCGAACA

Product: HTH-type transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MGQGEAKVTAPAFDATVQLFAERQPGQPVDPQCPVRDVLDRIGDKWSTLILGTLATGPHRFSAVQRAIPDISKRMLTQTL
RDLERDGLIARTVFPTKPPSVEYRLTHLGVTIFEPLTSLVRWANQSHAAIREARLAFDQAS

Sequences:

>Translated_141_residues
MGQGEAKVTAPAFDATVQLFAERQPGQPVDPQCPVRDVLDRIGDKWSTLILGTLATGPHRFSAVQRAIPDISKRMLTQTL
RDLERDGLIARTVFPTKPPSVEYRLTHLGVTIFEPLTSLVRWANQSHAAIREARLAFDQAS
>Mature_140_residues
GQGEAKVTAPAFDATVQLFAERQPGQPVDPQCPVRDVLDRIGDKWSTLILGTLATGPHRFSAVQRAIPDISKRMLTQTLR
DLERDGLIARTVFPTKPPSVEYRLTHLGVTIFEPLTSLVRWANQSHAAIREARLAFDQAS

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=108, Percent_Identity=40.7407407407407, Blast_Score=93, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 15616; Mature: 15485

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQGEAKVTAPAFDATVQLFAERQPGQPVDPQCPVRDVLDRIGDKWSTLILGTLATGPHR
CCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCHH
FSAVQRAIPDISKRMLTQTLRDLERDGLIARTVFPTKPPSVEYRLTHLGVTIFEPLTSLV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHH
RWANQSHAAIREARLAFDQAS
HHCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GQGEAKVTAPAFDATVQLFAERQPGQPVDPQCPVRDVLDRIGDKWSTLILGTLATGPHR
CCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCHH
FSAVQRAIPDISKRMLTQTLRDLERDGLIARTVFPTKPPSVEYRLTHLGVTIFEPLTSLV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHH
RWANQSHAAIREARLAFDQAS
HHCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]