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The map label for this gene is yqjQ [H]

Identifier: 162146913

GI number: 162146913

Start: 1107545

End: 1108351

Strand: Direct

Name: yqjQ [H]

Synonym: GDI_1112

Alternate gene names: 162146913

Gene position: 1107545-1108351 (Clockwise)

Preceding gene: 162146911

Following gene: 162146914

Centisome position: 28.08

GC content: 60.1

Gene sequence:

>807_bases
ATGACCGAAACTTCACGCAAAACAGCCCTTGTCACCGGGGCATCCAGCGGGATCGGAGCGGCCTACGCCGATCGTCTCGC
CCGTCGGGGCTATGACCTCGTTCTCGTCGCGCGCAACGTCGAGCGAATGGAGGAACTCGCGCGACGCCTGACCGCTGAGA
CGTCTCGTAAGGTGGACGTAGTCGGCGCGGACCTCACAAAAAGTCAGGATGTAGCGCGCGTCGAGGATCGCCTGCGCGGC
GATTCCGCGGATCGACCTGCTCGTTACAACGCGGGTATGGCGCTCACGGGGAGCGTCATCACGGCTCCCGCAGCCGACTT
GGAGCGCCTGATCGCGCTGAACGTGACTGCTCCGACGCGTCTTGCGACGCCGGCTGGCAATGCCTTTGCCGAACGGGGAC
AAGGCGCGATCGTGAATGTTGCCTCTGTTCTTGCGTTGGTCAGCGAATTGCTGGATGGCGCCTATAATGGCAGCAAGGCT
TACCTACTGACGTTCAGTCGCTGGCTTGGTCTGCAACTCGGTCCGAAAGGCGTATACGTTCAGGCTTTGCTGCCCGCGGT
TACTCGCACGGAAGTCTGGGAAAGGAGTGGGATGGATATCGGTATGTTCCCACCTCAAGTCGTAATGGACGTATATGACC
TGGTGGACGCAGCGTTGGTCGGTTTTGACCGGCGCGAGGATGTGACGATCCCGCCGCTGGTCGATGAGGATCAATGGAAG
GCCTATGACAAAGCACGACTGGCACTCCAGCCGGGATTTCAAAATGGTACACCGGCGCCCCGCTATCGCCTTAAAGTCTC
ACCATAA

Upstream 100 bases:

>100_bases
ATTTTCCGCCAGAGATTTTTTCGCAGTCCATTGCATATTGATAGCGAGGTGGCTATTGATGTGCAACGGTCACTATTCTG
CAAGTGACTGGAGAACTCTC

Downstream 100 bases:

>100_bases
CTCGCTCCGATCCAGGTGCGGGGGTTTGCAAGCGTCCAGTCGTAAGCAATGATGGGACGCTCGCCCCGTGCATAGCCTTC
GTGGCTTACGCCATGAAGGC

Product: Short-chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MTETSRKTALVTGASSGIGAAYADRLARRGYDLVLVARNVERMEELARRLTAETSRKVDVVGADLTKSQDVARVEDRLRG
DSADRPARYNAGMALTGSVITAPAADLERLIALNVTAPTRLATPAGNAFAERGQGAIVNVASVLALVSELLDGAYNGSKA
YLLTFSRWLGLQLGPKGVYVQALLPAVTRTEVWERSGMDIGMFPPQVVMDVYDLVDAALVGFDRREDVTIPPLVDEDQWK
AYDKARLALQPGFQNGTPAPRYRLKVSP

Sequences:

>Translated_268_residues
MTETSRKTALVTGASSGIGAAYADRLARRGYDLVLVARNVERMEELARRLTAETSRKVDVVGADLTKSQDVARVEDRLRG
DSADRPARYNAGMALTGSVITAPAADLERLIALNVTAPTRLATPAGNAFAERGQGAIVNVASVLALVSELLDGAYNGSKA
YLLTFSRWLGLQLGPKGVYVQALLPAVTRTEVWERSGMDIGMFPPQVVMDVYDLVDAALVGFDRREDVTIPPLVDEDQWK
AYDKARLALQPGFQNGTPAPRYRLKVSP
>Mature_267_residues
TETSRKTALVTGASSGIGAAYADRLARRGYDLVLVARNVERMEELARRLTAETSRKVDVVGADLTKSQDVARVEDRLRGD
SADRPARYNAGMALTGSVITAPAADLERLIALNVTAPTRLATPAGNAFAERGQGAIVNVASVLALVSELLDGAYNGSKAY
LLTFSRWLGLQLGPKGVYVQALLPAVTRTEVWERSGMDIGMFPPQVVMDVYDLVDAALVGFDRREDVTIPPLVDEDQWKA
YDKARLALQPGFQNGTPAPRYRLKVSP

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI4557649, Length=185, Percent_Identity=31.8918918918919, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI226371731, Length=189, Percent_Identity=29.1005291005291, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI7705855, Length=188, Percent_Identity=24.468085106383, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI5031737, Length=191, Percent_Identity=30.3664921465969, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI33667109, Length=191, Percent_Identity=30.3664921465969, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI1786701, Length=190, Percent_Identity=30, Blast_Score=65, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI71994604, Length=198, Percent_Identity=33.8383838383838, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71994600, Length=199, Percent_Identity=30.1507537688442, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322067, Length=178, Percent_Identity=29.2134831460674, Blast_Score=69, Evalue=8e-13,
Organism=Drosophila melanogaster, GI28571526, Length=207, Percent_Identity=37.1980676328502, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24644339, Length=197, Percent_Identity=36.0406091370558, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI21357041, Length=197, Percent_Identity=35.5329949238579, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24584752, Length=205, Percent_Identity=32.6829268292683, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI23397609, Length=194, Percent_Identity=32.9896907216495, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24584748, Length=186, Percent_Identity=30.1075268817204, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI161076933, Length=186, Percent_Identity=30.1075268817204, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24584744, Length=203, Percent_Identity=29.5566502463054, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI28574402, Length=202, Percent_Identity=29.7029702970297, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24640442, Length=196, Percent_Identity=26.530612244898, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24639444, Length=188, Percent_Identity=28.1914893617021, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 28976; Mature: 28845

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETSRKTALVTGASSGIGAAYADRLARRGYDLVLVARNVERMEELARRLTAETSRKVDV
CCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEE
VGADLTKSQDVARVEDRLRGDSADRPARYNAGMALTGSVITAPAADLERLIALNVTAPTR
EECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEECCHHHHHHHHEECCCCCCE
LATPAGNAFAERGQGAIVNVASVLALVSELLDGAYNGSKAYLLTFSRWLGLQLGPKGVYV
ECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHCCEECCCCEEH
QALLPAVTRTEVWERSGMDIGMFPPQVVMDVYDLVDAALVGFDRREDVTIPPLVDEDQWK
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
AYDKARLALQPGFQNGTPAPRYRLKVSP
HHHHHHEEECCCCCCCCCCCCEEEEECC
>Mature Secondary Structure 
TETSRKTALVTGASSGIGAAYADRLARRGYDLVLVARNVERMEELARRLTAETSRKVDV
CCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEE
VGADLTKSQDVARVEDRLRGDSADRPARYNAGMALTGSVITAPAADLERLIALNVTAPTR
EECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEECCHHHHHHHHEECCCCCCE
LATPAGNAFAERGQGAIVNVASVLALVSELLDGAYNGSKAYLLTFSRWLGLQLGPKGVYV
ECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHCCEECCCCEEH
QALLPAVTRTEVWERSGMDIGMFPPQVVMDVYDLVDAALVGFDRREDVTIPPLVDEDQWK
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
AYDKARLALQPGFQNGTPAPRYRLKVSP
HHHHHHEEECCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]