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The map label for this gene is 162146908

Identifier: 162146908

GI number: 162146908

Start: 1101064

End: 1101672

Strand: Direct

Name: 162146908

Synonym: GDI_1107

Alternate gene names: NA

Gene position: 1101064-1101672 (Clockwise)

Preceding gene: 162146905

Following gene: 162146909

Centisome position: 27.92

GC content: 58.62

Gene sequence:

>609_bases
ATGCGCGCGCCTCGCAGCGGACAACGCGGCCCGGTCGATCATGAACGTCGGGATCAGATCATGACGGCGGCCATCGAACA
TTTCGGGCATTACGGATACAAGAAGACCACGATGGCGGATCTGGCTGACGCCATCGGTCTGTCGAAAGCCTATATCTACA
AATTCTTCGACTCGAAGAAGGCGATCGGCGAAGCGATCTGCGCGCTCCAGCACGGCAAGATGCACGCGGATCTCCAGGCA
ATCATTGAGGATAACAAGTCGGCATCCGACAGAATGCGCCGGGTTTTCCTTGCGTTGGCGCGCAATACCGTCGCGCTGTT
TTCTCATGAGCGTAAGCTGCACGACATCGTCTATTCGGCAGTGGAGGAGGAGTGGACGTCTTCCAGGAGCTTTGTCGAGG
CATTGCGTGGCATGGTGGAGCGTCTGATCCATGAAGGTCGCGAGGGCGGCGAGTTCGAGCGCAAGACGCCCGTTGACGAG
ACCTGTCACGCTATCATGCTGGTCCTGCAGTCGATCTATCACCCTCTCCTGCTCGAACAGCACATGGACACGCTGGACGA
TGATGCGGCGACGCTGGCCAGTCTCGTCTTGAGAAGCCTCGCGCCGTGA

Upstream 100 bases:

>100_bases
TCCCGGCGTTGTCTAGTGACCGATATACACATACGTCACTCGTTGTCAATTTATAACCGACGTCCTATCTAGAAGGCGGA
TTTCAGTCAGGAGGAACAGG

Downstream 100 bases:

>100_bases
ATTTAGCGCGTGGCTTTATGTGACCAATTGACAATACGGTCACTCGTGTACATTTGGGCTTCCAAACCCGTTGGGAGCCC
GAACATGGCTGGAACACGCC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Activator; TetR-Family Transcriptional Regulatory Protein; HTH-Type Transcriptional Regulator Luxr

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MRAPRSGQRGPVDHERRDQIMTAAIEHFGHYGYKKTTMADLADAIGLSKAYIYKFFDSKKAIGEAICALQHGKMHADLQA
IIEDNKSASDRMRRVFLALARNTVALFSHERKLHDIVYSAVEEEWTSSRSFVEALRGMVERLIHEGREGGEFERKTPVDE
TCHAIMLVLQSIYHPLLLEQHMDTLDDDAATLASLVLRSLAP

Sequences:

>Translated_202_residues
MRAPRSGQRGPVDHERRDQIMTAAIEHFGHYGYKKTTMADLADAIGLSKAYIYKFFDSKKAIGEAICALQHGKMHADLQA
IIEDNKSASDRMRRVFLALARNTVALFSHERKLHDIVYSAVEEEWTSSRSFVEALRGMVERLIHEGREGGEFERKTPVDE
TCHAIMLVLQSIYHPLLLEQHMDTLDDDAATLASLVLRSLAP
>Mature_202_residues
MRAPRSGQRGPVDHERRDQIMTAAIEHFGHYGYKKTTMADLADAIGLSKAYIYKFFDSKKAIGEAICALQHGKMHADLQA
IIEDNKSASDRMRRVFLALARNTVALFSHERKLHDIVYSAVEEEWTSSRSFVEALRGMVERLIHEGREGGEFERKTPVDE
TCHAIMLVLQSIYHPLLLEQHMDTLDDDAATLASLVLRSLAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22835; Mature: 22835

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAPRSGQRGPVDHERRDQIMTAAIEHFGHYGYKKTTMADLADAIGLSKAYIYKFFDSKK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AIGEAICALQHGKMHADLQAIIEDNKSASDRMRRVFLALARNTVALFSHERKLHDIVYSA
HHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEEEWTSSRSFVEALRGMVERLIHEGREGGEFERKTPVDETCHAIMLVLQSIYHPLLLEQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HMDTLDDDAATLASLVLRSLAP
HHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRAPRSGQRGPVDHERRDQIMTAAIEHFGHYGYKKTTMADLADAIGLSKAYIYKFFDSKK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AIGEAICALQHGKMHADLQAIIEDNKSASDRMRRVFLALARNTVALFSHERKLHDIVYSA
HHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEEEWTSSRSFVEALRGMVERLIHEGREGGEFERKTPVDETCHAIMLVLQSIYHPLLLEQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HMDTLDDDAATLASLVLRSLAP
HHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA