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The map label for this gene is trbI [H]

Identifier: 162146904

GI number: 162146904

Start: 1097092

End: 1098252

Strand: Direct

Name: trbI [H]

Synonym: GDI_1103

Alternate gene names: 162146904

Gene position: 1097092-1098252 (Clockwise)

Preceding gene: 162146903

Following gene: 162146905

Centisome position: 27.82

GC content: 67.1

Gene sequence:

>1161_bases
ATGAACGACAGCGCCGGAAGTGGCGGCACCGAAACGCCAGGGGCCGCTGTCAGGCCATCTGGAGAGATGCGGCTGCGGAC
GACGCGGCCGCCGGTCACGCGGCTGTCGCGCAAGGTGATCCTGTGCCTGTCGGTCATCGCCCTGGGCGGCGTCGGCGGCG
CGCTCTATCTGGCGTTGAGGCCGGTGCCACCGAAGAGCAATGCCGAGCTTTATAATGTCGGCGGCCGCACCACGCCGGAC
GGGCTGGCGAACCTGCCGGGCGACTATAGCCATCCGCCGCGCCTCGGACAGCCGCTGCCTGGCGATCTCGGTCGGCCGTT
GCTCAAGGCGGGCGTGGGTGCCCCCGGCATGGCGACACCGGCCGCACCCGCTGATCCGGAAAAGCAGCGCGTCGCTCAGG
AGCAGGAAGCCGCGCGGGTCAGCCATCTGTTCACCCAGACGCAGATGGGACGGGATATCGCGACGCCGGCGACACCCGGT
ATGACTGCAGTCCAGTCCAGCGGCGCTCCTGCCGATCGCAAGCAGGCATTCCTCGACGGCCCGGTCGATCACCGCACCGT
CAGCGCCGAGCGTCTGGTGCCTGCGCCCAGCCCTTACGTGCTCCAGGCGGGCTCGATCATACCCGGTGCGCTGATCACCG
GTATCCGTTCGGACCTGCCGGGCGAGGTCACCGCCCAGGTGACGGAAAACGTCTATGACTCTCCGACCGGGAAAATCCTG
CTGATTCCGCAGGGGGCGAAGCTGATCGGCCGCTATGATTCCCAGATCGGCTATGGCCAGACCCGCGTGCTGCTGGTCTG
GACCCGGCTGATGCGCGGTGCCGGAGATTCGATCGTGCTGGAGAACGAACCGGCTGCGGATGCGGCCGGCTATGCCGGGT
TGCAGGATCAGACCGATAATCATTGGGGCGAGGTCTTCAAGGCTGCCCTGGTCTCGACCATCCTCAGCGTCGGCTCCGAG
GCCGATATCAGCGGCGGCAACGGCATTGCCCAGGCCCTGCGGACCGGCGGCTCGCAGGGCTTCAACCAGATCGGCGAACA
GATCGTCGGGCGCTCGCTGAATATCCAGCCCACCAACATCATCCGGCCGGGCTTTCCGGTGCGGGTGATGGTGCATCGTG
ACCTGGTTCTCACCCCCTACGGACAGGAGGTTTCCCGATGA

Upstream 100 bases:

>100_bases
GCATGATCGTCGATCGCCTGTTCGCCGCTGCCGAACTGCGGCTGGGAGCGAAGCACCAGCAGGTAGTGCGGATCGTCCGC
ACTGACGGGTCGCGGCGGTC

Downstream 100 bases:

>100_bases
CGAAACTCAGGCTCGGGCCGATCGCGAATGACAAGCCGGTGCGGCTCACCGTGGAACTGCCAGCGACCGTGCATCGCGAT
CTTGTCGCTTACGGGCGCCT

Product: conjugal transfer protein trbI/VirB10

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MNDSAGSGGTETPGAAVRPSGEMRLRTTRPPVTRLSRKVILCLSVIALGGVGGALYLALRPVPPKSNAELYNVGGRTTPD
GLANLPGDYSHPPRLGQPLPGDLGRPLLKAGVGAPGMATPAAPADPEKQRVAQEQEAARVSHLFTQTQMGRDIATPATPG
MTAVQSSGAPADRKQAFLDGPVDHRTVSAERLVPAPSPYVLQAGSIIPGALITGIRSDLPGEVTAQVTENVYDSPTGKIL
LIPQGAKLIGRYDSQIGYGQTRVLLVWTRLMRGAGDSIVLENEPAADAAGYAGLQDQTDNHWGEVFKAALVSTILSVGSE
ADISGGNGIAQALRTGGSQGFNQIGEQIVGRSLNIQPTNIIRPGFPVRVMVHRDLVLTPYGQEVSR

Sequences:

>Translated_386_residues
MNDSAGSGGTETPGAAVRPSGEMRLRTTRPPVTRLSRKVILCLSVIALGGVGGALYLALRPVPPKSNAELYNVGGRTTPD
GLANLPGDYSHPPRLGQPLPGDLGRPLLKAGVGAPGMATPAAPADPEKQRVAQEQEAARVSHLFTQTQMGRDIATPATPG
MTAVQSSGAPADRKQAFLDGPVDHRTVSAERLVPAPSPYVLQAGSIIPGALITGIRSDLPGEVTAQVTENVYDSPTGKIL
LIPQGAKLIGRYDSQIGYGQTRVLLVWTRLMRGAGDSIVLENEPAADAAGYAGLQDQTDNHWGEVFKAALVSTILSVGSE
ADISGGNGIAQALRTGGSQGFNQIGEQIVGRSLNIQPTNIIRPGFPVRVMVHRDLVLTPYGQEVSR
>Mature_386_residues
MNDSAGSGGTETPGAAVRPSGEMRLRTTRPPVTRLSRKVILCLSVIALGGVGGALYLALRPVPPKSNAELYNVGGRTTPD
GLANLPGDYSHPPRLGQPLPGDLGRPLLKAGVGAPGMATPAAPADPEKQRVAQEQEAARVSHLFTQTQMGRDIATPATPG
MTAVQSSGAPADRKQAFLDGPVDHRTVSAERLVPAPSPYVLQAGSIIPGALITGIRSDLPGEVTAQVTENVYDSPTGKIL
LIPQGAKLIGRYDSQIGYGQTRVLLVWTRLMRGAGDSIVLENEPAADAAGYAGLQDQTDNHWGEVFKAALVSTILSVGSE
ADISGGNGIAQALRTGGSQGFNQIGEQIVGRSLNIQPTNIIRPGFPVRVMVHRDLVLTPYGQEVSR

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 40311; Mature: 40311

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDSAGSGGTETPGAAVRPSGEMRLRTTRPPVTRLSRKVILCLSVIALGGVGGALYLALR
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
PVPPKSNAELYNVGGRTTPDGLANLPGDYSHPPRLGQPLPGDLGRPLLKAGVGAPGMATP
CCCCCCCCEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHCCCCCCCCCC
AAPADPEKQRVAQEQEAARVSHLFTQTQMGRDIATPATPGMTAVQSSGAPADRKQAFLDG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCHHHHHHHCC
PVDHRTVSAERLVPAPSPYVLQAGSIIPGALITGIRSDLPGEVTAQVTENVYDSPTGKIL
CCCCCCCCHHHCCCCCCCCEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEE
LIPQGAKLIGRYDSQIGYGQTRVLLVWTRLMRGAGDSIVLENEPAADAAGYAGLQDQTDN
EEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHCCCCCCCCCCH
HWGEVFKAALVSTILSVGSEADISGGNGIAQALRTGGSQGFNQIGEQIVGRSLNIQPTNI
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCE
IRPGFPVRVMVHRDLVLTPYGQEVSR
ECCCCCEEEEEECCEEECCCCHHHCC
>Mature Secondary Structure
MNDSAGSGGTETPGAAVRPSGEMRLRTTRPPVTRLSRKVILCLSVIALGGVGGALYLALR
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
PVPPKSNAELYNVGGRTTPDGLANLPGDYSHPPRLGQPLPGDLGRPLLKAGVGAPGMATP
CCCCCCCCEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHCCCCCCCCCC
AAPADPEKQRVAQEQEAARVSHLFTQTQMGRDIATPATPGMTAVQSSGAPADRKQAFLDG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCHHHHHHHCC
PVDHRTVSAERLVPAPSPYVLQAGSIIPGALITGIRSDLPGEVTAQVTENVYDSPTGKIL
CCCCCCCCHHHCCCCCCCCEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEE
LIPQGAKLIGRYDSQIGYGQTRVLLVWTRLMRGAGDSIVLENEPAADAAGYAGLQDQTDN
EEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHCCCCCCCCCCH
HWGEVFKAALVSTILSVGSEADISGGNGIAQALRTGGSQGFNQIGEQIVGRSLNIQPTNI
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCE
IRPGFPVRVMVHRDLVLTPYGQEVSR
ECCCCCEEEEEECCEEECCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]