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The map label for this gene is yfbE [C]

Identifier: 162146891

GI number: 162146891

Start: 1078703

End: 1079803

Strand: Reverse

Name: yfbE [C]

Synonym: GDI_1081

Alternate gene names: 162146891

Gene position: 1079803-1078703 (Counterclockwise)

Preceding gene: 162146892

Following gene: 162146889

Centisome position: 27.38

GC content: 60.85

Gene sequence:

>1101_bases
ATGGAATATATCGCACCCTATCTCCACCAAATCGATGCAAACCGTTGGTACTCGAATCAGGGACCTCTGTGCGAGGCCTT
CCAGGAGCGCCTGGGCCGCTTCTGGGGCATGGCATATGATAACATCGCCCTTGTGGCCAACGCGACCACTGGCCTTACCC
TGGCCTTGCGCGCGCAGGCTCTTCGACCGGGCTCCCGTTGCCTGATGCCGTCATGGACATTCGTGGCAAGTGCCGCTGCC
GTTGCGGCTGCCGACCTCGTGCCCCACTTCGTCGACGTCGATCCCGACACGTGGATCCCTGACCCCGACACGATCGAAGA
TCTCGCCCGGTCCCCCGATGTCGGGGCGATCCTCATCGTGGTTCCGTTCGGGTCACCCATCGACCTGGCGGTATGGGATG
CGGTCAGCCAGCGGACGGGTTGCCCTGTCATCATCGACGCGGCCGCCGCGTTCGACACGTTGCGCTCCGACGGTCCCATG
CGCATCGGCAAGAGTACGGTCGTTGTCAGCCTCCATGCGACGAAGGTGTTCGGTATTGGCGAAGGAGGCGCGGTTATTTC
CCGCGATCCTGTCCTGGCCGAGCATATCCGTATCCTTGCCCGGTTCGGTTTTTCCGGTAGCCGATCCGCTCAATACCCTG
GAATTAATGCGAAAATATCGGAATATACGGCTGCCGTCGGTCTCGCCGGCCTCGATGTCTGGGCCGAGACCCGGTCACAT
TGGGATGCGTTGACACGTCTCTATCTGGGTCTGCTTCCTGCTTCCGTCAGGCTGCCGCCTGCTTTCGGCCGCAACTGGGT
GGCCTCGACACTTGCCATCATCTGTCCTGAAAAATCCCAGCCTGTAGCGGAAACGCTGGCAAGGCGCGGAATAGGAACGG
TCTCCTGGTGGGGGAGCGGCTGTCATACCCAACCCGCCTATGCGGGCTACCCACGGGAACACCTTCCGACGACGCAGCAA
TATGGATATCGCGGCATCGGTCTGCCCTTCTATCAGGACATGACCGAGGAACAGGTCACGCGTGTTTGCACCACGCTTCT
AGATGTCCTGCCGGCGGAATCCGATGTGCCGCGTCCCCTGAAATCCTGCAATTTTTCCTAG

Upstream 100 bases:

>100_bases
AAAACCCCTGGACCGCGATATTTCAACTCAGGCTGCAAATACAAAATCGAGTAGTTCCGATATTATCGACATTCCCGTCG
CCTGGCCGCGCCTGCCTGCC

Downstream 100 bases:

>100_bases
TCGATCCCGCTGACATCAGGCCAATGACCATGCCCCCCTTGCGTAATATCGTCGCGTTTGTCGGCGAGAACGAGAATGGA
ATCCTGCGCCAGTTCAGTAG

Product: aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MEYIAPYLHQIDANRWYSNQGPLCEAFQERLGRFWGMAYDNIALVANATTGLTLALRAQALRPGSRCLMPSWTFVASAAA
VAAADLVPHFVDVDPDTWIPDPDTIEDLARSPDVGAILIVVPFGSPIDLAVWDAVSQRTGCPVIIDAAAAFDTLRSDGPM
RIGKSTVVVSLHATKVFGIGEGGAVISRDPVLAEHIRILARFGFSGSRSAQYPGINAKISEYTAAVGLAGLDVWAETRSH
WDALTRLYLGLLPASVRLPPAFGRNWVASTLAIICPEKSQPVAETLARRGIGTVSWWGSGCHTQPAYAGYPREHLPTTQQ
YGYRGIGLPFYQDMTEEQVTRVCTTLLDVLPAESDVPRPLKSCNFS

Sequences:

>Translated_366_residues
MEYIAPYLHQIDANRWYSNQGPLCEAFQERLGRFWGMAYDNIALVANATTGLTLALRAQALRPGSRCLMPSWTFVASAAA
VAAADLVPHFVDVDPDTWIPDPDTIEDLARSPDVGAILIVVPFGSPIDLAVWDAVSQRTGCPVIIDAAAAFDTLRSDGPM
RIGKSTVVVSLHATKVFGIGEGGAVISRDPVLAEHIRILARFGFSGSRSAQYPGINAKISEYTAAVGLAGLDVWAETRSH
WDALTRLYLGLLPASVRLPPAFGRNWVASTLAIICPEKSQPVAETLARRGIGTVSWWGSGCHTQPAYAGYPREHLPTTQQ
YGYRGIGLPFYQDMTEEQVTRVCTTLLDVLPAESDVPRPLKSCNFS
>Mature_366_residues
MEYIAPYLHQIDANRWYSNQGPLCEAFQERLGRFWGMAYDNIALVANATTGLTLALRAQALRPGSRCLMPSWTFVASAAA
VAAADLVPHFVDVDPDTWIPDPDTIEDLARSPDVGAILIVVPFGSPIDLAVWDAVSQRTGCPVIIDAAAAFDTLRSDGPM
RIGKSTVVVSLHATKVFGIGEGGAVISRDPVLAEHIRILARFGFSGSRSAQYPGINAKISEYTAAVGLAGLDVWAETRSH
WDALTRLYLGLLPASVRLPPAFGRNWVASTLAIICPEKSQPVAETLARRGIGTVSWWGSGCHTQPAYAGYPREHLPTTQQ
YGYRGIGLPFYQDMTEEQVTRVCTTLLDVLPAESDVPRPLKSCNFS

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=348, Percent_Identity=29.5977011494253, Blast_Score=92, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 39670; Mature: 39670

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYIAPYLHQIDANRWYSNQGPLCEAFQERLGRFWGMAYDNIALVANATTGLTLALRAQA
CCCHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEHHH
LRPGSRCLMPSWTFVASAAAVAAADLVPHFVDVDPDTWIPDPDTIEDLARSPDVGAILIV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCEEEEE
VPFGSPIDLAVWDAVSQRTGCPVIIDAAAAFDTLRSDGPMRIGKSTVVVSLHATKVFGIG
EECCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCEECCCEEEEEEEEEEEEEEC
EGGAVISRDPVLAEHIRILARFGFSGSRSAQYPGINAKISEYTAAVGLAGLDVWAETRSH
CCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
WDALTRLYLGLLPASVRLPPAFGRNWVASTLAIICPEKSQPVAETLARRGIGTVSWWGSG
HHHHHHHHHHHCCCCEECCHHHCCHHHHHHHHEECCCCCCCHHHHHHHCCCCEEEECCCC
CHTQPAYAGYPREHLPTTQQYGYRGIGLPFYQDMTEEQVTRVCTTLLDVLPAESDVPRPL
CCCCCCCCCCCHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
KSCNFS
HHCCCC
>Mature Secondary Structure
MEYIAPYLHQIDANRWYSNQGPLCEAFQERLGRFWGMAYDNIALVANATTGLTLALRAQA
CCCHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEHHH
LRPGSRCLMPSWTFVASAAAVAAADLVPHFVDVDPDTWIPDPDTIEDLARSPDVGAILIV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCEEEEE
VPFGSPIDLAVWDAVSQRTGCPVIIDAAAAFDTLRSDGPMRIGKSTVVVSLHATKVFGIG
EECCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCEECCCEEEEEEEEEEEEEEC
EGGAVISRDPVLAEHIRILARFGFSGSRSAQYPGINAKISEYTAAVGLAGLDVWAETRSH
CCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
WDALTRLYLGLLPASVRLPPAFGRNWVASTLAIICPEKSQPVAETLARRGIGTVSWWGSG
HHHHHHHHHHHCCCCEECCHHHCCHHHHHHHHEECCCCCCCHHHHHHHCCCCEEEECCCC
CHTQPAYAGYPREHLPTTQQYGYRGIGLPFYQDMTEEQVTRVCTTLLDVLPAESDVPRPL
CCCCCCCCCCCHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
KSCNFS
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]