| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is pucI [H]
Identifier: 162146864
GI number: 162146864
Start: 1060846
End: 1062321
Strand: Reverse
Name: pucI [H]
Synonym: GDI_1047
Alternate gene names: 162146864
Gene position: 1062321-1060846 (Counterclockwise)
Preceding gene: 162146866
Following gene: 162146861
Centisome position: 26.93
GC content: 68.02
Gene sequence:
>1476_bases ATGGCTCCAGCGCAGGGCCCAACCGGAAAAGATCCCATGCTGGACACGACCCAGACCGCCCGCGACCCCCTGCTGTGGAA TCCCGACATCGCCCCCCTGCCCCGGCAGAAACGGGACTGGACATGGATCACCCTCGCCGCCGTCTGGATGGGCATGGTCC ATAACGTGGTCGCCTACGAGGCCGCGGCCGGCCTCATGGCCATCGGCTTCTCCGCCATGCAGTGCCTGCTCATCGTCTGG ACGGCCTATTGCTCGCTGTTCGTCGCCATGTGGTTCAATGCCCGCGCGGGCACCGAATGGGGCATTCCCTTCTGCGTCCT GATCCGCGCCGCCTTCGGCCCGCGCGGCGCCGTCATCCCCGTCGCCATCCGCGCCGTGGTCGCCATCTTCTGGTTCTCGG TCCAGTCCTATGCGGCCTCGCAGGCGCTCGACGCCATCGCCGCCAGCCTGTGGCCGGACTGGAGCAGCCTGCACCTTCCC GACGGCACGGCGCTCGGCCCCTGGCTGGCGGTGACGATGATCTGGGGCCTGCACGCCCTCGTCGCCGCCCATGGCATACA CCGCATCCGCAATTTCGAACTGGTCGCCGGCCCGCTGGTCCTTGTCGTCGCCGGCGCCGCCGCCCTCTGGGCCATCAGGA TCTGCCACGGCACCGGCCCACTCTTCGCCATCCCGTCCACGCTGCACGGGTCGGCCCTGTTCCTCAAGGGCGGGGCCGCC GTCACCAGCATCATCGGCATATGGGCATCGTTCGCGGTCAACATCCCCGACCTCAGCCGCTTCGTCCGCTCGCAGCGAGA CCAGGCCATTGGCCAGCTCATCGGCCTGCCGGTCACCGCCGTCATCTTCACGCCCATGAGCATTCTCATCACCTCGGCCA CCCTGGTGATGTTCGGAAAACCGATCTGGAACCCGGTCGAAATCCTGATGCGGATCCACAACACGCCGCTCACGCTCGCC GGCGGCATCACGATCATCGTCGCGGCCCTGTCGGTCAACGTCGCCGGCAACATCGTCCCCGCCGCCTACGACCTGCTCAG CCTGTTCCCCCGCCGGCTCGATTTCGACCGCGCGGGCATCACGGTCATCCTGCTCGGCCTGTTCGTCGCCCCCTGGCTGT GGTTCGACCATCCGCAGACGGTCTTCGCCTTGCTCGGCCTGCTTTCGGCGGTGCTGGCACCCATCACCGGGATCATGCTG GCCGACTACTATCTGGTCCGCCGCCAGACGATCGACCTCGCGCAGCTCTACTCATTCTCCGGCCTCTATGCGGGCCGGCG GGGCTGGCGCCCGTCCGCCCTGGCGGCTACCGGCCTGACCCTGCTGCTGCTGCTGCCCCCCGCCCTGCTGCCGGCCGGCA CCCTCCCGGGGCAGGATGCCATCAACGCGGTATCCTGGTTCCTGGGCATTGCGACGGGCGCACTGCTATACACCGGCTTC AACCGCCACCCTCTTCACAGACCGAATGACCTGTGA
Upstream 100 bases:
>100_bases CTAGAGGCCTATCCATTCCCACCGGTTCGCGGACATGCCCCCCCCCGGATCGGTGCCCTGGCGAGCATCCCTGTCCGACC GTATGGAGCCATCCGGCCGG
Downstream 100 bases:
>100_bases AGAGGGGCATGATCACATCAGACTACGATGATCATCATTTCTTCTGCTGCGTCGGTTTCGCCGGGGCAGCCGGGGCAGCC GGGGCAGCCGGGGCAGCCGG
Product: allantoin permease
Products: NA
Alternate protein names: Allantoin transport protein [H]
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MAPAQGPTGKDPMLDTTQTARDPLLWNPDIAPLPRQKRDWTWITLAAVWMGMVHNVVAYEAAAGLMAIGFSAMQCLLIVW TAYCSLFVAMWFNARAGTEWGIPFCVLIRAAFGPRGAVIPVAIRAVVAIFWFSVQSYAASQALDAIAASLWPDWSSLHLP DGTALGPWLAVTMIWGLHALVAAHGIHRIRNFELVAGPLVLVVAGAAALWAIRICHGTGPLFAIPSTLHGSALFLKGGAA VTSIIGIWASFAVNIPDLSRFVRSQRDQAIGQLIGLPVTAVIFTPMSILITSATLVMFGKPIWNPVEILMRIHNTPLTLA GGITIIVAALSVNVAGNIVPAAYDLLSLFPRRLDFDRAGITVILLGLFVAPWLWFDHPQTVFALLGLLSAVLAPITGIML ADYYLVRRQTIDLAQLYSFSGLYAGRRGWRPSALAATGLTLLLLLPPALLPAGTLPGQDAINAVSWFLGIATGALLYTGF NRHPLHRPNDL
Sequences:
>Translated_491_residues MAPAQGPTGKDPMLDTTQTARDPLLWNPDIAPLPRQKRDWTWITLAAVWMGMVHNVVAYEAAAGLMAIGFSAMQCLLIVW TAYCSLFVAMWFNARAGTEWGIPFCVLIRAAFGPRGAVIPVAIRAVVAIFWFSVQSYAASQALDAIAASLWPDWSSLHLP DGTALGPWLAVTMIWGLHALVAAHGIHRIRNFELVAGPLVLVVAGAAALWAIRICHGTGPLFAIPSTLHGSALFLKGGAA VTSIIGIWASFAVNIPDLSRFVRSQRDQAIGQLIGLPVTAVIFTPMSILITSATLVMFGKPIWNPVEILMRIHNTPLTLA GGITIIVAALSVNVAGNIVPAAYDLLSLFPRRLDFDRAGITVILLGLFVAPWLWFDHPQTVFALLGLLSAVLAPITGIML ADYYLVRRQTIDLAQLYSFSGLYAGRRGWRPSALAATGLTLLLLLPPALLPAGTLPGQDAINAVSWFLGIATGALLYTGF NRHPLHRPNDL >Mature_490_residues APAQGPTGKDPMLDTTQTARDPLLWNPDIAPLPRQKRDWTWITLAAVWMGMVHNVVAYEAAAGLMAIGFSAMQCLLIVWT AYCSLFVAMWFNARAGTEWGIPFCVLIRAAFGPRGAVIPVAIRAVVAIFWFSVQSYAASQALDAIAASLWPDWSSLHLPD GTALGPWLAVTMIWGLHALVAAHGIHRIRNFELVAGPLVLVVAGAAALWAIRICHGTGPLFAIPSTLHGSALFLKGGAAV TSIIGIWASFAVNIPDLSRFVRSQRDQAIGQLIGLPVTAVIFTPMSILITSATLVMFGKPIWNPVEILMRIHNTPLTLAG GITIIVAALSVNVAGNIVPAAYDLLSLFPRRLDFDRAGITVILLGLFVAPWLWFDHPQTVFALLGLLSAVLAPITGIMLA DYYLVRRQTIDLAQLYSFSGLYAGRRGWRPSALAATGLTLLLLLPPALLPAGTLPGQDAINAVSWFLGIATGALLYTGFN RHPLHRPNDL
Specific function: Transport of allantoin [H]
COG id: COG1953
COG function: function code FH; Cytosine/uracil/thiamine/allantoin permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Escherichia coli, GI87081749, Length=456, Percent_Identity=28.9473684210526, Blast_Score=196, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6319495, Length=435, Percent_Identity=26.4367816091954, Blast_Score=161, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6322219, Length=421, Percent_Identity=23.7529691211401, Blast_Score=156, Evalue=9e-39, Organism=Saccharomyces cerevisiae, GI6319429, Length=421, Percent_Identity=23.2779097387173, Blast_Score=127, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6324766, Length=436, Percent_Identity=22.7064220183486, Blast_Score=95, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6323266, Length=443, Percent_Identity=20.9932279909707, Blast_Score=90, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6324645, Length=433, Percent_Identity=21.9399538106236, Blast_Score=88, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 - InterPro: IPR012681 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 52786; Mature: 52655
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPAQGPTGKDPMLDTTQTARDPLLWNPDIAPLPRQKRDWTWITLAAVWMGMVHNVVAYE CCCCCCCCCCCCCCCCCHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AAAGLMAIGFSAMQCLLIVWTAYCSLFVAMWFNARAGTEWGIPFCVLIRAAFGPRGAVIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHH VAIRAVVAIFWFSVQSYAASQALDAIAASLWPDWSSLHLPDGTALGPWLAVTMIWGLHAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHH VAAHGIHRIRNFELVAGPLVLVVAGAAALWAIRICHGTGPLFAIPSTLHGSALFLKGGAA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEECCHH VTSIIGIWASFAVNIPDLSRFVRSQRDQAIGQLIGLPVTAVIFTPMSILITSATLVMFGK HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC PIWNPVEILMRIHNTPLTLAGGITIIVAALSVNVAGNIVPAAYDLLSLFPRRLDFDRAGI CCCCHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCH TVILLGLFVAPWLWFDHPQTVFALLGLLSAVLAPITGIMLADYYLVRRQTIDLAQLYSFS HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLYAGRRGWRPSALAATGLTLLLLLPPALLPAGTLPGQDAINAVSWFLGIATGALLYTGF HHHCCCCCCCCHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC NRHPLHRPNDL CCCCCCCCCCC >Mature Secondary Structure APAQGPTGKDPMLDTTQTARDPLLWNPDIAPLPRQKRDWTWITLAAVWMGMVHNVVAYE CCCCCCCCCCCCCCCCHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AAAGLMAIGFSAMQCLLIVWTAYCSLFVAMWFNARAGTEWGIPFCVLIRAAFGPRGAVIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHH VAIRAVVAIFWFSVQSYAASQALDAIAASLWPDWSSLHLPDGTALGPWLAVTMIWGLHAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHH VAAHGIHRIRNFELVAGPLVLVVAGAAALWAIRICHGTGPLFAIPSTLHGSALFLKGGAA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEECCHH VTSIIGIWASFAVNIPDLSRFVRSQRDQAIGQLIGLPVTAVIFTPMSILITSATLVMFGK HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC PIWNPVEILMRIHNTPLTLAGGITIIVAALSVNVAGNIVPAAYDLLSLFPRRLDFDRAGI CCCCHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCH TVILLGLFVAPWLWFDHPQTVFALLGLLSAVLAPITGIMLADYYLVRRQTIDLAQLYSFS HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLYAGRRGWRPSALAATGLTLLLLLPPALLPAGTLPGQDAINAVSWFLGIATGALLYTGF HHHCCCCCCCCHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC NRHPLHRPNDL CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 11344136 [H]