Definition Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession NC_010125
Length 3,944,163

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The map label for this gene is yfdX [C]

Identifier: 162146863

GI number: 162146863

Start: 1060239

End: 1060811

Strand: Direct

Name: yfdX [C]

Synonym: GDI_1046

Alternate gene names: 162146863

Gene position: 1060239-1060811 (Clockwise)

Preceding gene: 162146862

Following gene: 162146865

Centisome position: 26.88

GC content: 65.45

Gene sequence:

>573_bases
CTGACCGATATCGTGACGGCTCGGCAGCTTGTCGCGCAGGGAAAAGTCGATCAGGCGGTGCCGCCGCTCTATGACGCGCA
GAAGCGCCTGGAAGCGGCGCGTAAGGCCGAAAAGCGCTACAATGTGGCGGAAAGCGCGCTTCAGCCTGCTCCGCAGCATC
CGCTGCCGTCGAACCATCCGGTGACGAGCACGCCGATCGACTGGGTTCCGGTCGGCGGCGCGTTTATCGCCAGCGATATT
CTGTCACCTGAAAAGAAGGCCGCGGTCGCCAAGGCCAACGATCAGTTGAAGGCCGGCGACAGCAAGGGCGCCGCCCAGAC
GATGCAGGTCGTTGGCGAGGATGTCGATTTCATTGTCGCGCTGGCGCCGTTGGATCAGACCGAGGGTGCGGTCAACCGGG
CGACAGTGTTCGTTGAGGGACGCCAGCCGGCCCAGGCGGCCGAGGCGCTGGATCAGGCCCTGAACGGGCTTGTCTTCGTG
TCGCAGGATTTTATCGAGACCCTGGCCCCGGCTGCCCCGGCTGCCCCGGCTGCCCCGGCTGCCCCGGCGAAACCGACGCA
GCAGAAGAAATGA

Upstream 100 bases:

>100_bases
CGCGCCCTCGCTGTCGCAGGCGGCGTCGCTTCATGCGACGTGGGAGAAGTTCAAGGCCGAGCGCGCGCTCCATCATCTCT
CCCATGACGGGGAGCAGGCC

Downstream 100 bases:

>100_bases
TGATCATCGTAGTCTGATGTGATCATGCCCCTCTTCACAGGTCATTCGGTCTGTGAAGAGGGTGGCGGTTGAAGCCGGTG
TATAGCAGTGCGCCCGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MTDIVTARQLVAQGKVDQAVPPLYDAQKRLEAARKAEKRYNVAESALQPAPQHPLPSNHPVTSTPIDWVPVGGAFIASDI
LSPEKKAAVAKANDQLKAGDSKGAAQTMQVVGEDVDFIVALAPLDQTEGAVNRATVFVEGRQPAQAAEALDQALNGLVFV
SQDFIETLAPAAPAAPAAPAAPAKPTQQKK

Sequences:

>Translated_190_residues
MTDIVTARQLVAQGKVDQAVPPLYDAQKRLEAARKAEKRYNVAESALQPAPQHPLPSNHPVTSTPIDWVPVGGAFIASDI
LSPEKKAAVAKANDQLKAGDSKGAAQTMQVVGEDVDFIVALAPLDQTEGAVNRATVFVEGRQPAQAAEALDQALNGLVFV
SQDFIETLAPAAPAAPAAPAAPAKPTQQKK
>Mature_189_residues
TDIVTARQLVAQGKVDQAVPPLYDAQKRLEAARKAEKRYNVAESALQPAPQHPLPSNHPVTSTPIDWVPVGGAFIASDIL
SPEKKAAVAKANDQLKAGDSKGAAQTMQVVGEDVDFIVALAPLDQTEGAVNRATVFVEGRQPAQAAEALDQALNGLVFVS
QDFIETLAPAAPAAPAAPAAPAKPTQQKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19859; Mature: 19727

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDIVTARQLVAQGKVDQAVPPLYDAQKRLEAARKAEKRYNVAESALQPAPQHPLPSNHP
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
VTSTPIDWVPVGGAFIASDILSPEKKAAVAKANDQLKAGDSKGAAQTMQVVGEDVDFIVA
CCCCCCCEEECCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEE
LAPLDQTEGAVNRATVFVEGRQPAQAAEALDQALNGLVFVSQDFIETLAPAAPAAPAAPA
ECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCEEEEHHHHHHHHCCCCCCCCCCCC
APAKPTQQKK
CCCCCCCCCC
>Mature Secondary Structure 
TDIVTARQLVAQGKVDQAVPPLYDAQKRLEAARKAEKRYNVAESALQPAPQHPLPSNHP
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
VTSTPIDWVPVGGAFIASDILSPEKKAAVAKANDQLKAGDSKGAAQTMQVVGEDVDFIVA
CCCCCCCEEECCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEE
LAPLDQTEGAVNRATVFVEGRQPAQAAEALDQALNGLVFVSQDFIETLAPAAPAAPAAPA
ECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCEEEEHHHHHHHHCCCCCCCCCCCC
APAKPTQQKK
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA