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The map label for this gene is recJ [H]

Identifier: 162146848

GI number: 162146848

Start: 1044640

End: 1046364

Strand: Reverse

Name: recJ [H]

Synonym: GDI_1031

Alternate gene names: 162146848

Gene position: 1046364-1044640 (Counterclockwise)

Preceding gene: 162146849

Following gene: 162146847

Centisome position: 26.53

GC content: 74.72

Gene sequence:

>1725_bases
GTGCTGGCGGATGCCGGGGGGCGTGTCGGGCTGATGATCGCCCAGCAGGCCGGGGTGTCGGACATCGTCGGGCAGATGCT
GGCCGCGCGCGGGCTGGACGGCCGGTCGGCGGCGACGTTCCTCGACCCGACCCTGCGGGCGCTGATGCCCGACCCCTCCG
CCCTGCGCGACATGGACCCGGCCGCCGAGCGGCTGGCCGACGCCGTCCGCCGGGGCGAGACGGTCGCGGTGTTCGGCGAT
TACGACGTGGACGGCGCCTGTGCTGCGGCCCTGGTCACCCAACTGCTGCGCGACCTGGGCTGCCCGGTCCTGACCCATGT
GCCCGACCGCATGACCGAGGGCTACGGCCCCAACGCTCCGGCGCTGGAGGCGCTGGCGGCGCGGGGGGCCACGCTGGTCG
TGTGCGTCGATTGCGGCACGGCGGCGGGCGATATCCTGGCCGGGCTGGCCGGGCGGGCCGACATCATCGTGCTGGACCAC
CACAAGGCCGAGGGCCCGCCGCCGCCGGTCCTGGCCACCGTCAATCCCAACCGGCTGGACTGCACCTCCGGCCAGCGGGG
GCTGTGCGCGGCGGGGGTGGCGTTCCTGGCGGCGGTGGCGACCGTGCGGACGCTGCGCCGCGCGGGATGGTTCGCCGCCC
GGCCGGAACCCGACCTGATGGCGTTCCTGGACATCGTGGCCCTGGCCACCGTCTGCGACGTCATGCCGCTGACGGACCTG
AACCGCGCGCTGGTCACGCAGGGGCTGAAGATCCTGGCCCGGCGGCAGCGCACGGGCCTGGACGCGCTGCTGGAGGTCGC
GGGCGCGCGCGACCCGCTTTCGGCCTTCACCTGCGGCTTCGCGCTGGGACCGCGGATCAACGCCGGCGGCCGGATCGCAG
AATCCGGACTGGGGCTGGACCTGCTGCTGTGCGACGACGCGGCCGAGGCCCGCCGCCTGGCCGAACGGCTGGATGCCGTC
AACCGCCGCCGCCAGACGGTGGAAACCACCATCCTGGACCGCGCGATGGACGAGGCCGCGTCCCAGCGCGCGGCCGGGCG
CGGCGTGCTGCTGCTGTCGGGGCGGGACTGGCACCCCGGCGTGGTGGGCATCGTCGCCGGGCGGATCAAGGAACGGTTCA
ACCGGCCGGTGCTGGTGGGGGCGGAACTGGAGGACGGCACGGTCAAGGGATCGAGCCGTTCGGTCGCGGACCTGGATCTG
GGGGCCGCGATCATCGCCGCGCGCCAGGCGGGACTGCTGACGACCGGCGGCGGCCATGCGATGGCGGCGGGTTTCTCGCT
GCCCCGGGAGGGGGTGCCGGCGCTGCACGATTTCCTTGAGGCCCGGCTGGCCGGCGCGACGGCGCTGCCGGATGCGACGG
ACGTGCTGATCGAGGGCGTGGTGCATGTGGCGGGTGCCACGACCGAACTGGCAACCGATATCGGCCGCCTGGCCCCGTTC
GGCGCGGGCAATGACGAACCGATCCTGGCGATCCCGCGCGTGCGGGTGGTACGGGCCGACCGGATCGGCCGCGAGGGCAA
CACGCTGCGCGTGCTGGTCGAGGGCGAGGGCGGCGGCCCGCGCCTGAAGGCGCTGCTGTTCCGCGCCGACGACCACCCCG
CCACCCCGATCCTGGAAGACCGCAACGCCCCCCCGCTGCACCTGGCGGGATGGCTGCGGGCGGAAAGCTGGAACGGCCGC
GTCAGCGCCGGCTTCTTCATCCGCGACGCCGCGATCGCGACCTGA

Upstream 100 bases:

>100_bases
CGTCGGTGCGGTCGGGGATGCCCTCGGGGATGCGTCCGGGACGATAGTCCTGGGCGTCGCCGCCAGCCTGGGGGGGCGGC
GCTGGCTGTGGCGCGACCCG

Downstream 100 bases:

>100_bases
ACGCCCGATAAAAACACCGCCCACCCCCAACAGGGCTTGACCACCCGCCCCCGGCAGGATAGGAACCCGCCCAAGCCTGC
TGTCCCATTCGTCTAGAGGC

Product: single-stranded-DNA-specific exonuclease recJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 574; Mature: 574

Protein sequence:

>574_residues
MLADAGGRVGLMIAQQAGVSDIVGQMLAARGLDGRSAATFLDPTLRALMPDPSALRDMDPAAERLADAVRRGETVAVFGD
YDVDGACAAALVTQLLRDLGCPVLTHVPDRMTEGYGPNAPALEALAARGATLVVCVDCGTAAGDILAGLAGRADIIVLDH
HKAEGPPPPVLATVNPNRLDCTSGQRGLCAAGVAFLAAVATVRTLRRAGWFAARPEPDLMAFLDIVALATVCDVMPLTDL
NRALVTQGLKILARRQRTGLDALLEVAGARDPLSAFTCGFALGPRINAGGRIAESGLGLDLLLCDDAAEARRLAERLDAV
NRRRQTVETTILDRAMDEAASQRAAGRGVLLLSGRDWHPGVVGIVAGRIKERFNRPVLVGAELEDGTVKGSSRSVADLDL
GAAIIAARQAGLLTTGGGHAMAAGFSLPREGVPALHDFLEARLAGATALPDATDVLIEGVVHVAGATTELATDIGRLAPF
GAGNDEPILAIPRVRVVRADRIGREGNTLRVLVEGEGGGPRLKALLFRADDHPATPILEDRNAPPLHLAGWLRAESWNGR
VSAGFFIRDAAIAT

Sequences:

>Translated_574_residues
MLADAGGRVGLMIAQQAGVSDIVGQMLAARGLDGRSAATFLDPTLRALMPDPSALRDMDPAAERLADAVRRGETVAVFGD
YDVDGACAAALVTQLLRDLGCPVLTHVPDRMTEGYGPNAPALEALAARGATLVVCVDCGTAAGDILAGLAGRADIIVLDH
HKAEGPPPPVLATVNPNRLDCTSGQRGLCAAGVAFLAAVATVRTLRRAGWFAARPEPDLMAFLDIVALATVCDVMPLTDL
NRALVTQGLKILARRQRTGLDALLEVAGARDPLSAFTCGFALGPRINAGGRIAESGLGLDLLLCDDAAEARRLAERLDAV
NRRRQTVETTILDRAMDEAASQRAAGRGVLLLSGRDWHPGVVGIVAGRIKERFNRPVLVGAELEDGTVKGSSRSVADLDL
GAAIIAARQAGLLTTGGGHAMAAGFSLPREGVPALHDFLEARLAGATALPDATDVLIEGVVHVAGATTELATDIGRLAPF
GAGNDEPILAIPRVRVVRADRIGREGNTLRVLVEGEGGGPRLKALLFRADDHPATPILEDRNAPPLHLAGWLRAESWNGR
VSAGFFIRDAAIAT
>Mature_574_residues
MLADAGGRVGLMIAQQAGVSDIVGQMLAARGLDGRSAATFLDPTLRALMPDPSALRDMDPAAERLADAVRRGETVAVFGD
YDVDGACAAALVTQLLRDLGCPVLTHVPDRMTEGYGPNAPALEALAARGATLVVCVDCGTAAGDILAGLAGRADIIVLDH
HKAEGPPPPVLATVNPNRLDCTSGQRGLCAAGVAFLAAVATVRTLRRAGWFAARPEPDLMAFLDIVALATVCDVMPLTDL
NRALVTQGLKILARRQRTGLDALLEVAGARDPLSAFTCGFALGPRINAGGRIAESGLGLDLLLCDDAAEARRLAERLDAV
NRRRQTVETTILDRAMDEAASQRAAGRGVLLLSGRDWHPGVVGIVAGRIKERFNRPVLVGAELEDGTVKGSSRSVADLDL
GAAIIAARQAGLLTTGGGHAMAAGFSLPREGVPALHDFLEARLAGATALPDATDVLIEGVVHVAGATTELATDIGRLAPF
GAGNDEPILAIPRVRVVRADRIGREGNTLRVLVEGEGGGPRLKALLFRADDHPATPILEDRNAPPLHLAGWLRAESWNGR
VSAGFFIRDAAIAT

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=563, Percent_Identity=36.5896980461812, Blast_Score=267, Evalue=1e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008279
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 59748; Mature: 59748

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLADAGGRVGLMIAQQAGVSDIVGQMLAARGLDGRSAATFLDPTLRALMPDPSALRDMDP
CCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHCHHHHHHCCCCHHHHCCCH
AAERLADAVRRGETVAVFGDYDVDGACAAALVTQLLRDLGCPVLTHVPDRMTEGYGPNAP
HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHCCCHHHHCCCCCCCH
ALEALAARGATLVVCVDCGTAAGDILAGLAGRADIIVLDHHKAEGPPPPVLATVNPNRLD
HHHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCCEEE
CTSGQRGLCAAGVAFLAAVATVRTLRRAGWFAARPEPDLMAFLDIVALATVCDVMPLTDL
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHH
NRALVTQGLKILARRQRTGLDALLEVAGARDPLSAFTCGFALGPRINAGGRIAESGLGLD
HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCEE
LLLCDDAAEARRLAERLDAVNRRRQTVETTILDRAMDEAASQRAAGRGVLLLSGRDWHPG
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
VVGIVAGRIKERFNRPVLVGAELEDGTVKGSSRSVADLDLGAAIIAARQAGLLTTGGGHA
HHHHHHHHHHHHCCCCEEEEEECCCCEECCCCCCCHHHHHHHHHHHHHHCCEEECCCCCC
MAAGFSLPREGVPALHDFLEARLAGATALPDATDVLIEGVVHVAGATTELATDIGRLAPF
EECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
GAGNDEPILAIPRVRVVRADRIGREGNTLRVLVEGEGGGPRLKALLFRADDHPATPILED
CCCCCCCEEECCCEEEEEHHHCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCC
RNAPPLHLAGWLRAESWNGRVSAGFFIRDAAIAT
CCCCCEEEEHEEEECCCCCCEEEEEEEECCHHCC
>Mature Secondary Structure
MLADAGGRVGLMIAQQAGVSDIVGQMLAARGLDGRSAATFLDPTLRALMPDPSALRDMDP
CCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHCHHHHHHCCCCHHHHCCCH
AAERLADAVRRGETVAVFGDYDVDGACAAALVTQLLRDLGCPVLTHVPDRMTEGYGPNAP
HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHCCCHHHHCCCCCCCH
ALEALAARGATLVVCVDCGTAAGDILAGLAGRADIIVLDHHKAEGPPPPVLATVNPNRLD
HHHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCCEEE
CTSGQRGLCAAGVAFLAAVATVRTLRRAGWFAARPEPDLMAFLDIVALATVCDVMPLTDL
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHH
NRALVTQGLKILARRQRTGLDALLEVAGARDPLSAFTCGFALGPRINAGGRIAESGLGLD
HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCEE
LLLCDDAAEARRLAERLDAVNRRRQTVETTILDRAMDEAASQRAAGRGVLLLSGRDWHPG
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
VVGIVAGRIKERFNRPVLVGAELEDGTVKGSSRSVADLDLGAAIIAARQAGLLTTGGGHA
HHHHHHHHHHHHCCCCEEEEEECCCCEECCCCCCCHHHHHHHHHHHHHHCCEEECCCCCC
MAAGFSLPREGVPALHDFLEARLAGATALPDATDVLIEGVVHVAGATTELATDIGRLAPF
EECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
GAGNDEPILAIPRVRVVRADRIGREGNTLRVLVEGEGGGPRLKALLFRADDHPATPILED
CCCCCCCEEECCCEEEEEHHHCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCC
RNAPPLHLAGWLRAESWNGRVSAGFFIRDAAIAT
CCCCCEEEEHEEEECCCCCCEEEEEEEECCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1987126; 9278503; 2649886 [H]