Click here to switch to the map view.

The map label for this gene is traG [H]

Identifier: 162146841

GI number: 162146841

Start: 1037334

End: 1039316

Strand: Reverse

Name: traG [H]

Synonym: GDI_1023

Alternate gene names: 162146841

Gene position: 1039316-1037334 (Counterclockwise)

Preceding gene: 162146842

Following gene: 162146840

Centisome position: 26.35

GC content: 65.51

Gene sequence:

>1983_bases
ATGAACCAGACCAAGATCCTATGGGGATCGGTGTGCGCCGTCAGCACCGTGATCCTCGCCTTTACCTGGGCCGCGACGCA
GTGGACTGCCTGGTGGCTCGGCTTCCAGCCGCAGCTTGGCGCGCCGTGGGTCACGCTGCTCGGCTGGCCGGTTTATTACC
CGCCGGAGTTCTTCTGGTGGTGGTTCGCCTATGACGCCTACGCACCGGACATCTTCACCACCGGCGGTTACATCGCGGGG
TCGGGAGGGATTGTCGCCGTCATCGTCGCGATCACGATGTCCGTCTGGCGTGCCCGCGAGAAAAAGCGCGCCACCACCTA
TGGCTCGGCGCACTGGGCCGATCCGCGTGAGATCCGCCGCGCCGGATTGCTCGCACCCGATGGCGTGGTGCTGGGCCGCT
TGGCCGATGCCTATCTCCGCCATGACGGACCCGAGCATGTGCTGTGCTTCGCGCCGACCCGATCGGGCAAGGGCGTCGGT
CTGGTGGTGCCGACCCTGCTGACGTGGCCGGGCTCCGCCATCGTCCATGACATCAAGGGCGAGAACTGGACATTGACCGC
CGGCTGGCGCTCCCGCTTCGGCCGGGTGCTGCTGTTCGATCCGACCAACCTCGCCAGCGCCGCCTACAATCCGTTGCTGG
AGGTTCGGCGCGGCGAGCGCGAAGTCCGGGACGTGCAGAACATCGCCGACGTGCTGGTCGATCCCGAAGGCGCTCTTGAG
AAGCGCAATCATTGGGAAAAGACCAGCCACGCGCTGCTGGTCGGCACCATCCTGCATGTCCTTTATGCCGAGGAAGACAA
GACCCTGGCCGGGGTCGCCAATTTCCTCTCCGACCCGAAACGGGCGATCGAGACCACGCTGCGCGCGATGATGACCACGC
CGCATCTTGGCAAAAAAGGTGTCCATCCGGTGGTCGCCAGTTCGGCGCGGGAACTGCTCAACAAGAGCGACAACGAGCGC
TCCGGCGTGCTCTCCACCGCCATGTCGTTCCTTGGCCTCTATCGCGATCCCGTTGTGGCCCACGTGACCCGGCGCTGCGA
CTGGCGCATCCGCGATCTCGTCGCTGGTACCGACCCGGCCACGCTGTATCTGGTGGTGCCGCCCTCGGATATCAGCCGCA
CCAAGCCGTTGGTCCGCCTGGTGCTCAACCAGATCGGCCGTCGTCTGACCGAGGAACTGGAGGCGAAGCGCCGTCACCGC
TTGCTATTGATGCTTGATGAATTCCCGGCGCTGGGACGGCTGGATTTCTTCGAGAGCGCGCTGGCCTTCATGGCGGGCTA
CGGCATCAAGAGCTTCCTGATCGGCCAGAGCCTGAACCAAATCGAGAAAGCCTACGGTCAGAATAATTCGATCCTCGACA
ACTGCCATGTCCGAGTCAGTTTCGCGACCAACGACGAGCGGACCGCCAAGCGGGTTTCCGATGCGCTCGGCACCGCGACG
GAGATCCGTGACGCGAAAAACTATGCCGGGCACCGGCTGTCGCCGTGGCTCGGGCATCTGATGGTGACGCGCCATGAGAC
GGCACGTCCGCTGCTGACGCCCGGCGAGATCATGCAGCTTCCCCCTGATGAGGAACTGGTGCTGGTGTCCGGCTGCCCGC
CGATCCGGGCGCGCAAGGCGCGGTATTTCGAGGATGCTGAACTGGCCGCGCGCATCCTCCCGCCACCCCGGTTCGAGCCA
CCTTCGGCTCCCGAGGAAACGCCACCCACCGGACCGCAGTCGCCAGGGGGCTGGGCCGATGTGGTCCAGCCGCCTCCTGC
CGGCAATGCGGATGATGATCCCGCCAATGCCGGCATCCGCCGGGAGCCGGAACTACCGAAACAGGAAGAGGTGGTGCCTG
CGCCGAGGAAACCGGTGCATGAATTTGATCCGCCCGAGGACGAACCCGAAGACGACGCCACACGAGCGCAGACCCTTCGG
CGCGGGGAGCGGGCTCTCGCGCGGCAGGTGGCGCTCGATCCTGGCGATCGGATGGGGCTGTGA

Upstream 100 bases:

>100_bases
ATCGGTGCGTCCGATTTTTGTCCGGATCTATCCGGGAAGCCCACCGCTTCAACTCAGAAATTGAAGTCAGTGGCACCGAT
CCTCTTGATCGGTGGTCATC

Downstream 100 bases:

>100_bases
CAGCGATGCGGATCAAGCACACGATCCGGCTGCCGCCCGATCTCAGCGTCATGCTTGCCGATTACGCCGCCCGCAAGAAG
GTGCCGCAGGCGCTGATCGT

Product: conjugal transfer coupling protein TraG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 660; Mature: 660

Protein sequence:

>660_residues
MNQTKILWGSVCAVSTVILAFTWAATQWTAWWLGFQPQLGAPWVTLLGWPVYYPPEFFWWWFAYDAYAPDIFTTGGYIAG
SGGIVAVIVAITMSVWRAREKKRATTYGSAHWADPREIRRAGLLAPDGVVLGRLADAYLRHDGPEHVLCFAPTRSGKGVG
LVVPTLLTWPGSAIVHDIKGENWTLTAGWRSRFGRVLLFDPTNLASAAYNPLLEVRRGEREVRDVQNIADVLVDPEGALE
KRNHWEKTSHALLVGTILHVLYAEEDKTLAGVANFLSDPKRAIETTLRAMMTTPHLGKKGVHPVVASSARELLNKSDNER
SGVLSTAMSFLGLYRDPVVAHVTRRCDWRIRDLVAGTDPATLYLVVPPSDISRTKPLVRLVLNQIGRRLTEELEAKRRHR
LLLMLDEFPALGRLDFFESALAFMAGYGIKSFLIGQSLNQIEKAYGQNNSILDNCHVRVSFATNDERTAKRVSDALGTAT
EIRDAKNYAGHRLSPWLGHLMVTRHETARPLLTPGEIMQLPPDEELVLVSGCPPIRARKARYFEDAELAARILPPPRFEP
PSAPEETPPTGPQSPGGWADVVQPPPAGNADDDPANAGIRREPELPKQEEVVPAPRKPVHEFDPPEDEPEDDATRAQTLR
RGERALARQVALDPGDRMGL

Sequences:

>Translated_660_residues
MNQTKILWGSVCAVSTVILAFTWAATQWTAWWLGFQPQLGAPWVTLLGWPVYYPPEFFWWWFAYDAYAPDIFTTGGYIAG
SGGIVAVIVAITMSVWRAREKKRATTYGSAHWADPREIRRAGLLAPDGVVLGRLADAYLRHDGPEHVLCFAPTRSGKGVG
LVVPTLLTWPGSAIVHDIKGENWTLTAGWRSRFGRVLLFDPTNLASAAYNPLLEVRRGEREVRDVQNIADVLVDPEGALE
KRNHWEKTSHALLVGTILHVLYAEEDKTLAGVANFLSDPKRAIETTLRAMMTTPHLGKKGVHPVVASSARELLNKSDNER
SGVLSTAMSFLGLYRDPVVAHVTRRCDWRIRDLVAGTDPATLYLVVPPSDISRTKPLVRLVLNQIGRRLTEELEAKRRHR
LLLMLDEFPALGRLDFFESALAFMAGYGIKSFLIGQSLNQIEKAYGQNNSILDNCHVRVSFATNDERTAKRVSDALGTAT
EIRDAKNYAGHRLSPWLGHLMVTRHETARPLLTPGEIMQLPPDEELVLVSGCPPIRARKARYFEDAELAARILPPPRFEP
PSAPEETPPTGPQSPGGWADVVQPPPAGNADDDPANAGIRREPELPKQEEVVPAPRKPVHEFDPPEDEPEDDATRAQTLR
RGERALARQVALDPGDRMGL
>Mature_660_residues
MNQTKILWGSVCAVSTVILAFTWAATQWTAWWLGFQPQLGAPWVTLLGWPVYYPPEFFWWWFAYDAYAPDIFTTGGYIAG
SGGIVAVIVAITMSVWRAREKKRATTYGSAHWADPREIRRAGLLAPDGVVLGRLADAYLRHDGPEHVLCFAPTRSGKGVG
LVVPTLLTWPGSAIVHDIKGENWTLTAGWRSRFGRVLLFDPTNLASAAYNPLLEVRRGEREVRDVQNIADVLVDPEGALE
KRNHWEKTSHALLVGTILHVLYAEEDKTLAGVANFLSDPKRAIETTLRAMMTTPHLGKKGVHPVVASSARELLNKSDNER
SGVLSTAMSFLGLYRDPVVAHVTRRCDWRIRDLVAGTDPATLYLVVPPSDISRTKPLVRLVLNQIGRRLTEELEAKRRHR
LLLMLDEFPALGRLDFFESALAFMAGYGIKSFLIGQSLNQIEKAYGQNNSILDNCHVRVSFATNDERTAKRVSDALGTAT
EIRDAKNYAGHRLSPWLGHLMVTRHETARPLLTPGEIMQLPPDEELVLVSGCPPIRARKARYFEDAELAARILPPPRFEP
PSAPEETPPTGPQSPGGWADVVQPPPAGNADDDPANAGIRREPELPKQEEVVPAPRKPVHEFDPPEDEPEDDATRAQTLR
RGERALARQVALDPGDRMGL

Specific function: Required for conjugative transfer of plasmid RP4. Binds tightly and specifically to the relaxase traI. Can also bind to DNA without sequence specificity. May form a pore-like structure that could serve as a channel for DNA transfer [H]

COG id: COG3505

COG function: function code U; Type IV secretory pathway, VirD4 components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the virD4/traG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003688 [H]

Pfam domain/function: PF02534 TraG [H]

EC number: NA

Molecular weight: Translated: 73202; Mature: 73202

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQTKILWGSVCAVSTVILAFTWAATQWTAWWLGFQPQLGAPWVTLLGWPVYYPPEFFWW
CCCCEEEHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHCCCCCCCCCCEEE
WFAYDAYAPDIFTTGGYIAGSGGIVAVIVAITMSVWRAREKKRATTYGSAHWADPREIRR
EEEHHCCCCCEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
AGLLAPDGVVLGRLADAYLRHDGPEHVLCFAPTRSGKGVGLVVPTLLTWPGSAIVHDIKG
HCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEHHHHHHCCCCCEEEECCC
ENWTLTAGWRSRFGRVLLFDPTNLASAAYNPLLEVRRGEREVRDVQNIADVLVDPEGALE
CCEEEECCHHHHCCCEEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHH
KRNHWEKTSHALLVGTILHVLYAEEDKTLAGVANFLSDPKRAIETTLRAMMTTPHLGKKG
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC
VHPVVASSARELLNKSDNERSGVLSTAMSFLGLYRDPVVAHVTRRCDWRIRDLVAGTDPA
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCCC
TLYLVVPPSDISRTKPLVRLVLNQIGRRLTEELEAKRRHRLLLMLDEFPALGRLDFFESA
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHH
LAFMAGYGIKSFLIGQSLNQIEKAYGQNNSILDNCHVRVSFATNDERTAKRVSDALGTAT
HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEEEECCCHHHHHHHHHHHCCHH
EIRDAKNYAGHRLSPWLGHLMVTRHETARPLLTPGEIMQLPPDEELVLVSGCPPIRARKA
HHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCHHEECCCCCCEEEEECCCCHHHHHH
RYFEDAELAARILPPPRFEPPSAPEETPPTGPQSPGGWADVVQPPPAGNADDDPANAGIR
HHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
REPELPKQEEVVPAPRKPVHEFDPPEDEPEDDATRAQTLRRGERALARQVALDPGDRMGL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNQTKILWGSVCAVSTVILAFTWAATQWTAWWLGFQPQLGAPWVTLLGWPVYYPPEFFWW
CCCCEEEHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHCCCCCCCCCCEEE
WFAYDAYAPDIFTTGGYIAGSGGIVAVIVAITMSVWRAREKKRATTYGSAHWADPREIRR
EEEHHCCCCCEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
AGLLAPDGVVLGRLADAYLRHDGPEHVLCFAPTRSGKGVGLVVPTLLTWPGSAIVHDIKG
HCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEHHHHHHCCCCCEEEECCC
ENWTLTAGWRSRFGRVLLFDPTNLASAAYNPLLEVRRGEREVRDVQNIADVLVDPEGALE
CCEEEECCHHHHCCCEEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHH
KRNHWEKTSHALLVGTILHVLYAEEDKTLAGVANFLSDPKRAIETTLRAMMTTPHLGKKG
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC
VHPVVASSARELLNKSDNERSGVLSTAMSFLGLYRDPVVAHVTRRCDWRIRDLVAGTDPA
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCCC
TLYLVVPPSDISRTKPLVRLVLNQIGRRLTEELEAKRRHRLLLMLDEFPALGRLDFFESA
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHH
LAFMAGYGIKSFLIGQSLNQIEKAYGQNNSILDNCHVRVSFATNDERTAKRVSDALGTAT
HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEEEECCCHHHHHHHHHHHCCHH
EIRDAKNYAGHRLSPWLGHLMVTRHETARPLLTPGEIMQLPPDEELVLVSGCPPIRARKA
HHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCHHEECCCCCCEEEEECCCCHHHHHH
RYFEDAELAARILPPPRFEPPSAPEETPPTGPQSPGGWADVVQPPPAGNADDDPANAGIR
HHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
REPELPKQEEVVPAPRKPVHEFDPPEDEPEDDATRAQTLRRGERALARQVALDPGDRMGL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1665997; 8021214; 11976307 [H]