| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is 162146778
Identifier: 162146778
GI number: 162146778
Start: 977390
End: 978661
Strand: Direct
Name: 162146778
Synonym: GDI_0960
Alternate gene names: NA
Gene position: 977390-978661 (Clockwise)
Preceding gene: 162146777
Following gene: 162146779
Centisome position: 24.78
GC content: 56.05
Gene sequence:
>1272_bases ATGACATTTTGGAACGACAAGCAGGCGGACGCTGCCCATTTGCGTCTTTTCGTGCCTGGGGACGGCTGGCGTGCCTTCAA GGATAAGATGAATGACGAGGGTGATCGGGTCGAAGAGCCCGGCACGCAGAGAACAATTGAGAGCAGCCTCCTAAATGTGC TGAACGCGACAAACGTCGTTGTGCTGACCGGCACCGGTTCATCCTTTGCCGCACGCAATGATGTGGGTAAACCCACACCC GCCGGCATGTGGGACGTGTGGCAGGCAGTTGAGGCCGAAGTTGGACCCGCCACTTTCAAGGAGGTTTGCGACAGTTTTGC GAGCGCGCGGATCGAAGATAATATTGAGCGGCTTCTGACGCTGTGCAAACTCTACCTCGAACTTCACGAGACAGCGGTCG AGGATGCCACCTTCCTCAGAATCCGCGATTTTGTAGCAACCGCCGAGAAAGCGATCCTTGCCCGTGTCGACTTCGTCGAC TGGACGACCAATCTCGATGCTCATGCCGGATTGATCCAAAAGATTGGCCGCCGTAGTGTGCGCAAGGCCCGTTCCAAGCT ATTCACTACCAACTATGATCTCTGCTTTGAGGAGGCAGCACGGCGTCACCGCTTCACGATCATCGACGGCTTCTCGCATG GGCTCGACCAGATTTACGATCGCAGTCAGTTCGAGTTTGACATCGTTCGTCGCTCCGGCCTGCGCGATGCGCCCGATTAT ATTGAGAACGTCTTCCACCTCTATAAACTGCATGGCTCCCTCGACTGGCGACGGAAAGGAGCGGAGATTTACCGCTCACG CGGCCCAGAAGGTGACCCGGTCCTCATCTATCCGCGTTCGAGCAAATACCAGGAAAGCTTCGATGCTCCCTATCTGGACA TGATCAGCGCACTCCAGGCGGCACTACGCGAACCTGATACGGCCGTTCTGATCTCGGGCTTTGGCTTCAACGACGACCAT ATCAGTCGACCTATACTGTCAGCCGTCGAGGCGAACATGTCGCTACGACTGGTTATCTGCGATCCAGCCTTCATTCCAGC AGCAGCCTTAAACGCTACCGACCAAAGTATGACTACGGTCGTAGAGCCGCAGAACAGATTTCTTGCGGCCTTCAAGCGCA TGGCCGAGGTCGGTGACGCACGGATTCATCTGATCAACGGCCGGTTCCAGGATTTGGTCTCGGCTTTACCTGATCTTATC GGCGAGACAGATCGCGAACGTCACATGCAGCGTGTCCGCATGCTCAGAGACAGCATGGACATCACGGCGTGA
Upstream 100 bases:
>100_bases CTCGCATGCCCCTGTTGCACTTCTGCGTCTCTCTGGCTGCCGTCGCAATAAAAAGCTGCTAATCCTTTTCCAACGAGATC ACGGGGATGGCTTGGGGCGG
Downstream 100 bases:
>100_bases CCCGCATCAACCCGATCAATCCCGATCGTTATATTGGCACGATCACCCAATCGACGGCCTCCTATGTCCACGTCAACCTG CCCAATGCCGCAGTTGTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MTFWNDKQADAAHLRLFVPGDGWRAFKDKMNDEGDRVEEPGTQRTIESSLLNVLNATNVVVLTGTGSSFAARNDVGKPTP AGMWDVWQAVEAEVGPATFKEVCDSFASARIEDNIERLLTLCKLYLELHETAVEDATFLRIRDFVATAEKAILARVDFVD WTTNLDAHAGLIQKIGRRSVRKARSKLFTTNYDLCFEEAARRHRFTIIDGFSHGLDQIYDRSQFEFDIVRRSGLRDAPDY IENVFHLYKLHGSLDWRRKGAEIYRSRGPEGDPVLIYPRSSKYQESFDAPYLDMISALQAALREPDTAVLISGFGFNDDH ISRPILSAVEANMSLRLVICDPAFIPAAALNATDQSMTTVVEPQNRFLAAFKRMAEVGDARIHLINGRFQDLVSALPDLI GETDRERHMQRVRMLRDSMDITA
Sequences:
>Translated_423_residues MTFWNDKQADAAHLRLFVPGDGWRAFKDKMNDEGDRVEEPGTQRTIESSLLNVLNATNVVVLTGTGSSFAARNDVGKPTP AGMWDVWQAVEAEVGPATFKEVCDSFASARIEDNIERLLTLCKLYLELHETAVEDATFLRIRDFVATAEKAILARVDFVD WTTNLDAHAGLIQKIGRRSVRKARSKLFTTNYDLCFEEAARRHRFTIIDGFSHGLDQIYDRSQFEFDIVRRSGLRDAPDY IENVFHLYKLHGSLDWRRKGAEIYRSRGPEGDPVLIYPRSSKYQESFDAPYLDMISALQAALREPDTAVLISGFGFNDDH ISRPILSAVEANMSLRLVICDPAFIPAAALNATDQSMTTVVEPQNRFLAAFKRMAEVGDARIHLINGRFQDLVSALPDLI GETDRERHMQRVRMLRDSMDITA >Mature_422_residues TFWNDKQADAAHLRLFVPGDGWRAFKDKMNDEGDRVEEPGTQRTIESSLLNVLNATNVVVLTGTGSSFAARNDVGKPTPA GMWDVWQAVEAEVGPATFKEVCDSFASARIEDNIERLLTLCKLYLELHETAVEDATFLRIRDFVATAEKAILARVDFVDW TTNLDAHAGLIQKIGRRSVRKARSKLFTTNYDLCFEEAARRHRFTIIDGFSHGLDQIYDRSQFEFDIVRRSGLRDAPDYI ENVFHLYKLHGSLDWRRKGAEIYRSRGPEGDPVLIYPRSSKYQESFDAPYLDMISALQAALREPDTAVLISGFGFNDDHI SRPILSAVEANMSLRLVICDPAFIPAAALNATDQSMTTVVEPQNRFLAAFKRMAEVGDARIHLINGRFQDLVSALPDLIG ETDRERHMQRVRMLRDSMDITA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47781; Mature: 47649
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFWNDKQADAAHLRLFVPGDGWRAFKDKMNDEGDRVEEPGTQRTIESSLLNVLNATNVV CCCCCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE VLTGTGSSFAARNDVGKPTPAGMWDVWQAVEAEVGPATFKEVCDSFASARIEDNIERLLT EEEECCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LCKLYLELHETAVEDATFLRIRDFVATAEKAILARVDFVDWTTNLDAHAGLIQKIGRRSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHH RKARSKLFTTNYDLCFEEAARRHRFTIIDGFSHGLDQIYDRSQFEFDIVRRSGLRDAPDY HHHHHHHCCCCCHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCHHHHHHHCCCCCCHHH IENVFHLYKLHGSLDWRRKGAEIYRSRGPEGDPVLIYPRSSKYQESFDAPYLDMISALQA HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHCCCCHHHHHHHHHH ALREPDTAVLISGFGFNDDHISRPILSAVEANMSLRLVICDPAFIPAAALNATDQSMTTV HHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHCCCCCCHHHEE VEPQNRFLAAFKRMAEVGDARIHLINGRFQDLVSALPDLIGETDRERHMQRVRMLRDSMD ECCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC ITA CCC >Mature Secondary Structure TFWNDKQADAAHLRLFVPGDGWRAFKDKMNDEGDRVEEPGTQRTIESSLLNVLNATNVV CCCCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE VLTGTGSSFAARNDVGKPTPAGMWDVWQAVEAEVGPATFKEVCDSFASARIEDNIERLLT EEEECCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LCKLYLELHETAVEDATFLRIRDFVATAEKAILARVDFVDWTTNLDAHAGLIQKIGRRSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHH RKARSKLFTTNYDLCFEEAARRHRFTIIDGFSHGLDQIYDRSQFEFDIVRRSGLRDAPDY HHHHHHHCCCCCHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCHHHHHHHCCCCCCHHH IENVFHLYKLHGSLDWRRKGAEIYRSRGPEGDPVLIYPRSSKYQESFDAPYLDMISALQA HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHCCCCHHHHHHHHHH ALREPDTAVLISGFGFNDDHISRPILSAVEANMSLRLVICDPAFIPAAALNATDQSMTTV HHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHCCCCCCHHHEE VEPQNRFLAAFKRMAEVGDARIHLINGRFQDLVSALPDLIGETDRERHMQRVRMLRDSMD ECCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC ITA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA