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The map label for this gene is viuB [H]

Identifier: 162146715

GI number: 162146715

Start: 910664

End: 911437

Strand: Direct

Name: viuB [H]

Synonym: GDI_0893

Alternate gene names: 162146715

Gene position: 910664-911437 (Clockwise)

Preceding gene: 162146714

Following gene: 162146717

Centisome position: 23.09

GC content: 70.67

Gene sequence:

>774_bases
GTGCGGCTGCGCATGATGCAGGTCGTCCGCGTGGAAGATCTGTCGCCGCGCATGCGGCGCGTCGTCTTCACCGGTCCCGA
CCTGGCGGACTTCAGGACCGCCGCCGCCGACGATCACGTCAAGCTGTTCTTTCCCGCGCCGGGGCAGTATCGGCCCGTCC
TGCCGGCCATCGGCCCCGATGGACGGCCTGTTCGCGATCCCGCGGTCCCCGTCATCGCCCGGGACTATACGCCCCGGCGG
TTCGATCCCGCGTGCGGCGAACTGAGCATCGAGTTCGTGCTGCACGGTGATGGCCCCGCCACAAGCTGGGCCGCGCAGGC
CGCGCCCGGACAATGGCTGGGGGTCGGCGGCCCGCGCGGTTCGTTCGTGATATCCGGCGATCATGCCGGTTATCTCCTGA
TCGGGGACGAAACCGCGCTGCCGGCGATCGCGCGGCGCCTGGAAGAACTGCCCGCCGGCACCACGGTGACGGCGCTGATC
GAAGTCGAGGACGCAGCCGAGGAACGTCGCCTGTCGAGCGCCGCCGACGCGCGGGTCCTGTGGCTGCCCCGCGCCGGCGC
ACCGGCCGGGCGATCCCCGGTGCTGCTTGACGCTCTGCGCCGCCTCGCCCTGGACACGCGGAACCTGCATGTGTGGATCG
GGGCGGAAATCGAGACCGTCCGGGCGCTGCGGACCTACCTGATCGAAGAAGAAGCGATACCGCGCGACCGGATCCGTGCC
GCCGGATACTGGCGCCTGGGCACGTCCAACGGCGGCGAACGCATTCGGGATTAG

Upstream 100 bases:

>100_bases
GCGACCGAGATCCTCGGCAGCTCGGACTGACCGTCCCGCCCTTTTCCGGAGTACCGCGATGAACGCATTATCTTCTCCGG
CGCCGCGCGCCCGTCCGCCG

Downstream 100 bases:

>100_bases
CGGCTTTCGGGGTTGCCGGCGGCATAGGCCCGCAGCAGCAGGGCCTGCATCTTTTCATCCGGCGCGCCCAGCCAGCTTTG
CAGGAAGGGGTGGCTTTCGT

Product: vibriobactin utilization protein viuB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MRLRMMQVVRVEDLSPRMRRVVFTGPDLADFRTAAADDHVKLFFPAPGQYRPVLPAIGPDGRPVRDPAVPVIARDYTPRR
FDPACGELSIEFVLHGDGPATSWAAQAAPGQWLGVGGPRGSFVISGDHAGYLLIGDETALPAIARRLEELPAGTTVTALI
EVEDAAEERRLSSAADARVLWLPRAGAPAGRSPVLLDALRRLALDTRNLHVWIGAEIETVRALRTYLIEEEAIPRDRIRA
AGYWRLGTSNGGERIRD

Sequences:

>Translated_257_residues
MRLRMMQVVRVEDLSPRMRRVVFTGPDLADFRTAAADDHVKLFFPAPGQYRPVLPAIGPDGRPVRDPAVPVIARDYTPRR
FDPACGELSIEFVLHGDGPATSWAAQAAPGQWLGVGGPRGSFVISGDHAGYLLIGDETALPAIARRLEELPAGTTVTALI
EVEDAAEERRLSSAADARVLWLPRAGAPAGRSPVLLDALRRLALDTRNLHVWIGAEIETVRALRTYLIEEEAIPRDRIRA
AGYWRLGTSNGGERIRD
>Mature_257_residues
MRLRMMQVVRVEDLSPRMRRVVFTGPDLADFRTAAADDHVKLFFPAPGQYRPVLPAIGPDGRPVRDPAVPVIARDYTPRR
FDPACGELSIEFVLHGDGPATSWAAQAAPGQWLGVGGPRGSFVISGDHAGYLLIGDETALPAIARRLEELPAGTTVTALI
EVEDAAEERRLSSAADARVLWLPRAGAPAGRSPVLLDALRRLALDTRNLHVWIGAEIETVRALRTYLIEEEAIPRDRIRA
AGYWRLGTSNGGERIRD

Specific function: Unknown

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Vibrio vibriobactin/vulbinactin utilization protein viuB [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=249, Percent_Identity=35.7429718875502, Blast_Score=127, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 28109; Mature: 28109

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRMMQVVRVEDLSPRMRRVVFTGPDLADFRTAAADDHVKLFFPAPGQYRPVLPAIGPD
CCCHHEEHEECCCCCCCCEEEEECCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCC
GRPVRDPAVPVIARDYTPRRFDPACGELSIEFVLHGDGPATSWAAQAAPGQWLGVGGPRG
CCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHCCCCCCEEECCCCCC
SFVISGDHAGYLLIGDETALPAIARRLEELPAGTTVTALIEVEDAAEERRLSSAADARVL
CEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHCCCCEEE
WLPRAGAPAGRSPVLLDALRRLALDTRNLHVWIGAEIETVRALRTYLIEEEAIPRDRIRA
EEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHCC
AGYWRLGTSNGGERIRD
CEEEEECCCCCCCCCCC
>Mature Secondary Structure
MRLRMMQVVRVEDLSPRMRRVVFTGPDLADFRTAAADDHVKLFFPAPGQYRPVLPAIGPD
CCCHHEEHEECCCCCCCCEEEEECCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCC
GRPVRDPAVPVIARDYTPRRFDPACGELSIEFVLHGDGPATSWAAQAAPGQWLGVGGPRG
CCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHCCCCCCEEECCCCCC
SFVISGDHAGYLLIGDETALPAIARRLEELPAGTTVTALIEVEDAAEERRLSSAADARVL
CEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHCCCCEEE
WLPRAGAPAGRSPVLLDALRRLALDTRNLHVWIGAEIETVRALRTYLIEEEAIPRDRIRA
EEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHCC
AGYWRLGTSNGGERIRD
CEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]