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The map label for this gene is ybgC [C]

Identifier: 162146624

GI number: 162146624

Start: 820528

End: 820932

Strand: Direct

Name: ybgC [C]

Synonym: GDI_0802

Alternate gene names: 162146624

Gene position: 820528-820932 (Clockwise)

Preceding gene: 162146623

Following gene: 162146625

Centisome position: 20.8

GC content: 67.16

Gene sequence:

>405_bases
GTGAGGCACAACATTCCTTTCCGCATTTATTACGAAGATACGGACGCCGGCGGCGTGGTCTACCACGCCCGGTATCTCGG
CCTGGCCGAGCGCGCGCGGACCGAGGCGATTCGCGGCCTGGGCCAGCCGGTGTCCGCGCTGCTGGACGATTTCGGCCTCG
CCTTCGTGGTGCGCAACGCCAGCATCGACTACCGCTCTCCGCTGCGACTGGACGACGTCGTGACGGTGACCACGCGCCTG
ACCGAACTGGGCTCGGCCAGTTGCCGGCTGGAACAGACCTTCCTGCTGGGGCAGACGCTGTGCGCGGCGCTGGATGTCCG
CCTGGCCTGCGTGCGCGCGGCCGATGGCCGGGCCGCCCGATTTCCGCCTTTATGGCGTGATCTTCTGACTGGACTCGTGG
ATTGA

Upstream 100 bases:

>100_bases
GCCGGGGACGCACGCTGGGCGAGCGGGGCTGGCGGCATCTGGGGCTTGCCCCCCCGCCACGGCAGACGGGCCAGGGCGAC
CTGCTGCAGGGGGACGACGG

Downstream 100 bases:

>100_bases
AGGCCGGTCGGTAATTTCTTGTTTCGATGGGTGTGTCCTGCGGCTGGGGTGCTTCTGCTTTCCCGCGGAAACCTATAAGG
AACGCACTGGAGTGCAGTGT

Product: acyl-CoA thioester hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MRHNIPFRIYYEDTDAGGVVYHARYLGLAERARTEAIRGLGQPVSALLDDFGLAFVVRNASIDYRSPLRLDDVVTVTTRL
TELGSASCRLEQTFLLGQTLCAALDVRLACVRAADGRAARFPPLWRDLLTGLVD

Sequences:

>Translated_134_residues
MRHNIPFRIYYEDTDAGGVVYHARYLGLAERARTEAIRGLGQPVSALLDDFGLAFVVRNASIDYRSPLRLDDVVTVTTRL
TELGSASCRLEQTFLLGQTLCAALDVRLACVRAADGRAARFPPLWRDLLTGLVD
>Mature_134_residues
MRHNIPFRIYYEDTDAGGVVYHARYLGLAERARTEAIRGLGQPVSALLDDFGLAFVVRNASIDYRSPLRLDDVVTVTTRL
TELGSASCRLEQTFLLGQTLCAALDVRLACVRAADGRAARFPPLWRDLLTGLVD

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=107, Percent_Identity=42.9906542056075, Blast_Score=87, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 14839; Mature: 14839

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHNIPFRIYYEDTDAGGVVYHARYLGLAERARTEAIRGLGQPVSALLDDFGLAFVVRNA
CCCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECC
SIDYRSPLRLDDVVTVTTRLTELGSASCRLEQTFLLGQTLCAALDVRLACVRAADGRAAR
CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
FPPLWRDLLTGLVD
CCHHHHHHHHHHCC
>Mature Secondary Structure
MRHNIPFRIYYEDTDAGGVVYHARYLGLAERARTEAIRGLGQPVSALLDDFGLAFVVRNA
CCCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECC
SIDYRSPLRLDDVVTVTTRLTELGSASCRLEQTFLLGQTLCAALDVRLACVRAADGRAAR
CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
FPPLWRDLLTGLVD
CCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]