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The map label for this gene is yrbE [C]

Identifier: 162146610

GI number: 162146610

Start: 803221

End: 804342

Strand: Reverse

Name: yrbE [C]

Synonym: GDI_0788

Alternate gene names: 162146610

Gene position: 804342-803221 (Counterclockwise)

Preceding gene: 162146611

Following gene: 162146609

Centisome position: 20.39

GC content: 68.09

Gene sequence:

>1122_bases
ATGGTCCCTGCAAACCGGCGACGGTGCTACCGTGATCGTCCTGTCGGGGGACTGGCTTGCCCAGGGGGGCAAGGTCCGGG
GGGGCCCATTCCCACGTTCCCGCCCGACGGGTTGCGCCAGGCCGCGCCCGGCCGGCCGCTGACCTTCCGCAGCGATGCGC
TGGGACGGTGGGATACCGGGCTGATCGCCTTCCTGTGGGATCTGAAGCAGCGGGCGACCCAGGCCCATTTGGACCTGCGC
ACCGACACGCTGCCCGATTCCGCGCGCAAGCTGCTGGACCTGCTGCCGGAAGCACCACCGCCACCGCCGACGCCCCGGCC
CCGCACCTTCGCCCCCGTCACCGCGCTGGGCGCATTCACGATCGAGAGCCTGACCGAGATCGGCACCGTGACCGAACTGG
GCGTGGAGACGGCACGCGGCGGCCTGGAGGCCGTGACCGGACGCGGGCGGATGCGGTCGATCGACCTGATGTCGAACATC
CGCGATGCCGGGCCGTCGGCGCTGCTGATCGTCAGTGTCGTGAACTTCCTGGTGGGCGCCATCCTGGCCTTCGTCGGCGC
GGTGCAGTTGCGCAAGTTCGCCGCCGACATCTATGTCGCCAGCCTGGTCGGCATCGCCATGGTGCGCGAGATGTCGGCGG
TCATGACCGCGATCATCATGGCGGGGCGCACCGGCGGGGCCTACGCCGCGCGCATCGCGACCATGCAGGGCAACGAGGAA
ATCGACGCCCTGACGGTCTTCGGCATCCCGGTTTCCAGCTACCTGATCCTGCCCTCGATCCTGGGGCTGGTGGCCACCAT
GCCGTTTCTGTACCTGTATGGCTGCCTGATCGGCATGCTGGGCGGTTTCACGGTGGCGATCAGCATGCTGGCCGTCACCG
GGGCGGGCTATTTCCACCAGACGATCAATGCCGTCGGACTGAACCAGTTCGAGTTCGGCTTCATCAAGAGCATCTTCTTC
GCCATTCTGATCGGGCTGACCAGTTGCCGGATCGGGTTACGGTCGGGGCGCAGCGCCGCCGATGTCGGCGTGGCGGCGAC
GCGGGCCGTGGTGGTGGGGATCGTCGGCGTCATCACGCTGGATGCGATCTTCGCCGTCATCGCCACGACCCTGGGGATCT
GA

Upstream 100 bases:

>100_bases
TACTGCCAGCCCCTTGTCCCTCCGCCGTCATCTGATAAGGAGGATGGAGGATCGAAGCGATTGGAGAGGCGGTGAGCAGC
ACTGATCACGGCCAGCCGGA

Downstream 100 bases:

>100_bases
CGCATGACCGATTCCCACGCGGCACAGCCCGAAACCCTGATGGCGCTGGACGGGGTCACGCTGGCGTTCGGGCCCAAGGT
CGTACAGCAGAACGTCACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MVPANRRRCYRDRPVGGLACPGGQGPGGPIPTFPPDGLRQAAPGRPLTFRSDALGRWDTGLIAFLWDLKQRATQAHLDLR
TDTLPDSARKLLDLLPEAPPPPPTPRPRTFAPVTALGAFTIESLTEIGTVTELGVETARGGLEAVTGRGRMRSIDLMSNI
RDAGPSALLIVSVVNFLVGAILAFVGAVQLRKFAADIYVASLVGIAMVREMSAVMTAIIMAGRTGGAYAARIATMQGNEE
IDALTVFGIPVSSYLILPSILGLVATMPFLYLYGCLIGMLGGFTVAISMLAVTGAGYFHQTINAVGLNQFEFGFIKSIFF
AILIGLTSCRIGLRSGRSAADVGVAATRAVVVGIVGVITLDAIFAVIATTLGI

Sequences:

>Translated_373_residues
MVPANRRRCYRDRPVGGLACPGGQGPGGPIPTFPPDGLRQAAPGRPLTFRSDALGRWDTGLIAFLWDLKQRATQAHLDLR
TDTLPDSARKLLDLLPEAPPPPPTPRPRTFAPVTALGAFTIESLTEIGTVTELGVETARGGLEAVTGRGRMRSIDLMSNI
RDAGPSALLIVSVVNFLVGAILAFVGAVQLRKFAADIYVASLVGIAMVREMSAVMTAIIMAGRTGGAYAARIATMQGNEE
IDALTVFGIPVSSYLILPSILGLVATMPFLYLYGCLIGMLGGFTVAISMLAVTGAGYFHQTINAVGLNQFEFGFIKSIFF
AILIGLTSCRIGLRSGRSAADVGVAATRAVVVGIVGVITLDAIFAVIATTLGI
>Mature_373_residues
MVPANRRRCYRDRPVGGLACPGGQGPGGPIPTFPPDGLRQAAPGRPLTFRSDALGRWDTGLIAFLWDLKQRATQAHLDLR
TDTLPDSARKLLDLLPEAPPPPPTPRPRTFAPVTALGAFTIESLTEIGTVTELGVETARGGLEAVTGRGRMRSIDLMSNI
RDAGPSALLIVSVVNFLVGAILAFVGAVQLRKFAADIYVASLVGIAMVREMSAVMTAIIMAGRTGGAYAARIATMQGNEE
IDALTVFGIPVSSYLILPSILGLVATMPFLYLYGCLIGMLGGFTVAISMLAVTGAGYFHQTINAVGLNQFEFGFIKSIFF
AILIGLTSCRIGLRSGRSAADVGVAATRAVVVGIVGVITLDAIFAVIATTLGI

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=251, Percent_Identity=25.4980079681275, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 39143; Mature: 39143

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPANRRRCYRDRPVGGLACPGGQGPGGPIPTFPPDGLRQAAPGRPLTFRSDALGRWDTG
CCCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHCCCCCCEEECCCCCCCCHHH
LIAFLWDLKQRATQAHLDLRTDTLPDSARKLLDLLPEAPPPPPTPRPRTFAPVTALGAFT
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
IESLTEIGTVTELGVETARGGLEAVTGRGRMRSIDLMSNIRDAGPSALLIVSVVNFLVGA
HHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ILAFVGAVQLRKFAADIYVASLVGIAMVREMSAVMTAIIMAGRTGGAYAARIATMQGNEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEECCCCCC
IDALTVFGIPVSSYLILPSILGLVATMPFLYLYGCLIGMLGGFTVAISMLAVTGAGYFHQ
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
TINAVGLNQFEFGFIKSIFFAILIGLTSCRIGLRSGRSAADVGVAATRAVVVGIVGVITL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
DAIFAVIATTLGI
HHHHHHHHHHHCC
>Mature Secondary Structure
MVPANRRRCYRDRPVGGLACPGGQGPGGPIPTFPPDGLRQAAPGRPLTFRSDALGRWDTG
CCCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHCCCCCCEEECCCCCCCCHHH
LIAFLWDLKQRATQAHLDLRTDTLPDSARKLLDLLPEAPPPPPTPRPRTFAPVTALGAFT
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
IESLTEIGTVTELGVETARGGLEAVTGRGRMRSIDLMSNIRDAGPSALLIVSVVNFLVGA
HHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ILAFVGAVQLRKFAADIYVASLVGIAMVREMSAVMTAIIMAGRTGGAYAARIATMQGNEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEECCCCCC
IDALTVFGIPVSSYLILPSILGLVATMPFLYLYGCLIGMLGGFTVAISMLAVTGAGYFHQ
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
TINAVGLNQFEFGFIKSIFFAILIGLTSCRIGLRSGRSAADVGVAATRAVVVGIVGVITL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
DAIFAVIATTLGI
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA