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The map label for this gene is oprB [H]

Identifier: 162146592

GI number: 162146592

Start: 787082

End: 788647

Strand: Direct

Name: oprB [H]

Synonym: GDI_0770

Alternate gene names: 162146592

Gene position: 787082-788647 (Clockwise)

Preceding gene: 162146591

Following gene: 162146593

Centisome position: 19.96

GC content: 63.98

Gene sequence:

>1566_bases
ATGCCGGACGCAGGTAGATGGAACCCGATGATTCGTACTGTGTTCGGGGCGGCGGTCGTGCTGTCCATATCCGGCCTGAT
GCTATCCGACGGGTCCGCTCGCGCGCAGTCCACCCAGTCCGACGTCGTGGCGACCACGCGGCCGGTCGTGGTGGGCGGCT
ATGCGAATCGGGTCCCGGCACGGCTTGTCCCCGCTCCCGCCCCGAAACAGGCCGTCCCGGCAACCACGTCCTCGAAACAG
GCCGCGGCGGCGCACGTCTATGTGCCCCCGTCCTTGCTGGCGGGCTATTTCCCGCCCAGTTACGAGGAATGGATTCGCGG
CAGCACCATGACGGGCGACTGGGGCGGGCTGCGTACCCATCTGGAAGATCGCGGCGTGCATATCCAGGGGCATTTCCTGG
AAGACGCATCCGGCAATCCGGTGGGCGGAAAATATGCCGGTGTCCGCTACGCGCATGAATTCGGGCTGGGCGCCGACATC
AATTTCGCCAGGCTGATCCATCATGACATCGGCGTCCTGCATATTCTGCTGACCGAACGCGCGGGCCTCAGCCTGGCGGC
GGGCCCGCTGGGCGGCGCGGTGGATTCCGTGCAGCAGATCTTCGGCTCGGGCGAGACCGTGCGCATCACCCGCCTGTCGC
TGGAAAAGCAGTTCAATCGCTACGTCTCGATGGAAGCCGGCTGGATCAACACCGAAAACGATTTCGGGCAGTCCACCATG
CATTGGGGCATGTCGATCTACTGCCAGTTCCAGACCAACGCGATCTGCGGCATGCCGCAGGGGCTGGCGATGAATGGCGG
CTATGGCTGGTATCCCACGGCCCATCCGGGCGCGTGGCTGAAGCTCTATCCGGCCGGCAACGACCATTATCTGGTGTCGG
CGGGTATCTATAACGTCGATAACACCATCTCGAACACCCATAACGGCTTCAAGCTGGGCCTGGACGATACGACGGGCGTC
TACCTGCCGTTCCAGCTCGGCTGGCACCACGGCAACGACTATACCGGCGACATGGACGGCAATATCCGCATCGGCGGATA
CTGGGACACGTCCGAGGTCCCGATCGTCACCTCCAAGGCCGGGGCCTATCAGCCGGCGAGCGTCGAACTGATCGACCTGC
CGACCACCCAGATCCGCGGCCGCTTCGGCGGCTGGTTCGAAGGTGACCAGATGATCCAGCGCGACCAGTCCGGCAGCGGC
CGGGGTACGGTCATTTTCGGGTCGTTCATCTGGGGCGATCCGCGCACCGCGCTGTCGCCGTATTTCGCGACCTGGGGCAT
CATCCGCAAGGGAACGCTCCCCAATCGTCCGAACGATACGATCAGCTTCGGCGGCAAGATCGCGGTGCTGAATCCCAAGA
TGGCGCAATATGCGGGCATGCTGCAGCAGCAGGGCCAGAAGGCGATCCGCCCTTCGAACGAACCGGCCATCGAACTGAAC
TATGGCTGGCGGCCGACCCCGTGGGCCACGTTGCGCCCCGGCCTGCAATATGTCTGGCACCCGGGCGGCACCAACCGCTA
CGCCAACGCCTTCATCATAGACATGGAAACCGGCCTCACATTCTAA

Upstream 100 bases:

>100_bases
GGCGAACCCAGGACGACGACAGAATAGAGCGTCGCCCAAAACAATAAAGGTGCCTGCAGGCACCTGACGTGATGATGTCC
CTCCGGCATGCCCTTGGCCG

Downstream 100 bases:

>100_bases
GCCTGCCCGTAAACGCGCTCTGGTGGCGATCCGACGCGCGTTTCCTGTGCTCCGGTGCTCGGAAACACACGACGGGCGTG
CCGCCGCGCGGCACTCTCGC

Product: porin B

Products: NA

Alternate protein names: Glucose porin; Outer membrane protein D1 [H]

Number of amino acids: Translated: 521; Mature: 520

Protein sequence:

>521_residues
MPDAGRWNPMIRTVFGAAVVLSISGLMLSDGSARAQSTQSDVVATTRPVVVGGYANRVPARLVPAPAPKQAVPATTSSKQ
AAAAHVYVPPSLLAGYFPPSYEEWIRGSTMTGDWGGLRTHLEDRGVHIQGHFLEDASGNPVGGKYAGVRYAHEFGLGADI
NFARLIHHDIGVLHILLTERAGLSLAAGPLGGAVDSVQQIFGSGETVRITRLSLEKQFNRYVSMEAGWINTENDFGQSTM
HWGMSIYCQFQTNAICGMPQGLAMNGGYGWYPTAHPGAWLKLYPAGNDHYLVSAGIYNVDNTISNTHNGFKLGLDDTTGV
YLPFQLGWHHGNDYTGDMDGNIRIGGYWDTSEVPIVTSKAGAYQPASVELIDLPTTQIRGRFGGWFEGDQMIQRDQSGSG
RGTVIFGSFIWGDPRTALSPYFATWGIIRKGTLPNRPNDTISFGGKIAVLNPKMAQYAGMLQQQGQKAIRPSNEPAIELN
YGWRPTPWATLRPGLQYVWHPGGTNRYANAFIIDMETGLTF

Sequences:

>Translated_521_residues
MPDAGRWNPMIRTVFGAAVVLSISGLMLSDGSARAQSTQSDVVATTRPVVVGGYANRVPARLVPAPAPKQAVPATTSSKQ
AAAAHVYVPPSLLAGYFPPSYEEWIRGSTMTGDWGGLRTHLEDRGVHIQGHFLEDASGNPVGGKYAGVRYAHEFGLGADI
NFARLIHHDIGVLHILLTERAGLSLAAGPLGGAVDSVQQIFGSGETVRITRLSLEKQFNRYVSMEAGWINTENDFGQSTM
HWGMSIYCQFQTNAICGMPQGLAMNGGYGWYPTAHPGAWLKLYPAGNDHYLVSAGIYNVDNTISNTHNGFKLGLDDTTGV
YLPFQLGWHHGNDYTGDMDGNIRIGGYWDTSEVPIVTSKAGAYQPASVELIDLPTTQIRGRFGGWFEGDQMIQRDQSGSG
RGTVIFGSFIWGDPRTALSPYFATWGIIRKGTLPNRPNDTISFGGKIAVLNPKMAQYAGMLQQQGQKAIRPSNEPAIELN
YGWRPTPWATLRPGLQYVWHPGGTNRYANAFIIDMETGLTF
>Mature_520_residues
PDAGRWNPMIRTVFGAAVVLSISGLMLSDGSARAQSTQSDVVATTRPVVVGGYANRVPARLVPAPAPKQAVPATTSSKQA
AAAHVYVPPSLLAGYFPPSYEEWIRGSTMTGDWGGLRTHLEDRGVHIQGHFLEDASGNPVGGKYAGVRYAHEFGLGADIN
FARLIHHDIGVLHILLTERAGLSLAAGPLGGAVDSVQQIFGSGETVRITRLSLEKQFNRYVSMEAGWINTENDFGQSTMH
WGMSIYCQFQTNAICGMPQGLAMNGGYGWYPTAHPGAWLKLYPAGNDHYLVSAGIYNVDNTISNTHNGFKLGLDDTTGVY
LPFQLGWHHGNDYTGDMDGNIRIGGYWDTSEVPIVTSKAGAYQPASVELIDLPTTQIRGRFGGWFEGDQMIQRDQSGSGR
GTVIFGSFIWGDPRTALSPYFATWGIIRKGTLPNRPNDTISFGGKIAVLNPKMAQYAGMLQQQGQKAIRPSNEPAIELNY
GWRPTPWATLRPGLQYVWHPGGTNRYANAFIIDMETGLTF

Specific function: Substrate-selective channel for a variety of different sugars. Could potentially facilitate the diffusion of diverse compounds, dependent on the presence of a hydroxyl group, but is presumably restricted to carbohydrates. Involved in the transport of gluc

COG id: COG3659

COG function: function code M; Carbohydrate-selective porin

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oprB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049 [H]

Pfam domain/function: PF04966 OprB [H]

EC number: NA

Molecular weight: Translated: 56569; Mature: 56438

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDAGRWNPMIRTVFGAAVVLSISGLMLSDGSARAQSTQSDVVATTRPVVVGGYANRVPA
CCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEECCCEEECCCCCCCCC
RLVPAPAPKQAVPATTSSKQAAAAHVYVPPSLLAGYFPPSYEEWIRGSTMTGDWGGLRTH
EECCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHH
LEDRGVHIQGHFLEDASGNPVGGKYAGVRYAHEFGLGADINFARLIHHDIGVLHILLTER
HHHCCEEEEEEEEECCCCCCCCCCCCCEEEEHHCCCCCCCHHHHHHHHHHCEEEEEEECC
AGLSLAAGPLGGAVDSVQQIFGSGETVRITRLSLEKQFNRYVSMEAGWINTENDFGQSTM
CCCEEECCCCCHHHHHHHHHHCCCCEEEEEEEHHHHHHHHEEEEECCEECCCCCCCCHHE
HWGMSIYCQFQTNAICGMPQGLAMNGGYGWYPTAHPGAWLKLYPAGNDHYLVSAGIYNVD
ECCEEEEEEEECCEECCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECC
NTISNTHNGFKLGLDDTTGVYLPFQLGWHHGNDYTGDMDGNIRIGGYWDTSEVPIVTSKA
CCCCCCCCCEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEECCC
GAYQPASVELIDLPTTQIRGRFGGWFEGDQMIQRDQSGSGRGTVIFGSFIWGDPRTALSP
CCCCCCCEEEEECCCHHHCCCCCCEECCCHHHHHCCCCCCCEEEEEEEEEECCCCHHCCC
YFATWGIIRKGTLPNRPNDTISFGGKIAVLNPKMAQYAGMLQQQGQKAIRPSNEPAIELN
HHHHHHEEECCCCCCCCCCCEECCCEEEEECCHHHHHHHHHHHCCHHHCCCCCCCEEEEE
YGWRPTPWATLRPGLQYVWHPGGTNRYANAFIIDMETGLTF
CCCCCCCCHHCCCCCEEEECCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure 
PDAGRWNPMIRTVFGAAVVLSISGLMLSDGSARAQSTQSDVVATTRPVVVGGYANRVPA
CCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEECCCEEECCCCCCCCC
RLVPAPAPKQAVPATTSSKQAAAAHVYVPPSLLAGYFPPSYEEWIRGSTMTGDWGGLRTH
EECCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHH
LEDRGVHIQGHFLEDASGNPVGGKYAGVRYAHEFGLGADINFARLIHHDIGVLHILLTER
HHHCCEEEEEEEEECCCCCCCCCCCCCEEEEHHCCCCCCCHHHHHHHHHHCEEEEEEECC
AGLSLAAGPLGGAVDSVQQIFGSGETVRITRLSLEKQFNRYVSMEAGWINTENDFGQSTM
CCCEEECCCCCHHHHHHHHHHCCCCEEEEEEEHHHHHHHHEEEEECCEECCCCCCCCHHE
HWGMSIYCQFQTNAICGMPQGLAMNGGYGWYPTAHPGAWLKLYPAGNDHYLVSAGIYNVD
ECCEEEEEEEECCEECCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECC
NTISNTHNGFKLGLDDTTGVYLPFQLGWHHGNDYTGDMDGNIRIGGYWDTSEVPIVTSKA
CCCCCCCCCEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEECCC
GAYQPASVELIDLPTTQIRGRFGGWFEGDQMIQRDQSGSGRGTVIFGSFIWGDPRTALSP
CCCCCCCEEEEECCCHHHCCCCCCEECCCHHHHHCCCCCCCEEEEEEEEEECCCCHHCCC
YFATWGIIRKGTLPNRPNDTISFGGKIAVLNPKMAQYAGMLQQQGQKAIRPSNEPAIELN
HHHHHHEEECCCCCCCCCCCEECCCEEEEECCHHHHHHHHHHHCCHHHCCCCCCCEEEEE
YGWRPTPWATLRPGLQYVWHPGGTNRYANAFIIDMETGLTF
CCCCCCCCHHCCCCCEEEECCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8125108; 10984043; 2450582; 8132494; 7768797 [H]