| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is 162146550
Identifier: 162146550
GI number: 162146550
Start: 745223
End: 747061
Strand: Direct
Name: 162146550
Synonym: GDI_0727
Alternate gene names: NA
Gene position: 745223-747061 (Clockwise)
Preceding gene: 162146548
Following gene: 162146551
Centisome position: 18.89
GC content: 72.81
Gene sequence:
>1839_bases ATGCAGCGTTTTCACCTCGTATGCACGGCCGCGTTGGCCATCGTAGCACCGCTGGCGGCCGTGCCTGCCGGCGCGTGGGC GGCGGCCCCCGCTCCGTCCATGCAGCCCCCTGCCGTGACGGTGGCGGCGGCGCCGTGGCCGGACGGGTTGTCGGGGTCCA TGCTGGTGGCCACCGTCGCGGCGCTGGAAGGCGACGACGCCGTCGCGGCATCGGCCTTCCGCCAGGCCTATGGGCTCGAC CCCTCCCGCTCCGTCCTGCTGCGGCAGGCGTTCCTGTACAGCGCTCTGGCGGGCGACGATGCGGCGGCCGGCCTGGCGGC GCGCCTGCCGGGGCAGTTGATGGCCGAACTGGTCATGGGCAATGACGCGGTCCGGGCCGGACGCTGGTCGGACGCGCAGG CGCATTACGACCGGGTGCAGCAGGATGCGATGCTGGCGGCGATCCGCCCGTTGCTGGATGCCTGGACCCTTATGGGCGCC GGCCAGCCTGACCGGGCGCTGGCGATCATCGACCCCTGGACCGCCGACCGGGTGCTGGGCCGCTATTATGCCGTCCATGC GGCGCTGATCGCCGATCTCGCGGGACAGCATGACCGGGCCGACCGGTATTATCGCCTGGCCCTGGACGCATCGCCGGGCC GCGACCTGTTTTCCACCTGGGCCCTGGGGCACTGGCTGATCGCCCAGGGCCATCGCGACCAGGCCACGCGGCTGCTCGAC AGCCTGGTGGCCGGCGGGGCCGGCCTGTCGCTGGCGCGTGACGGCGTGCTGGCCGCGATGGACCGCCCACCGGTCACGTC ACCGCGCCAGGGTATCGCGCAGGCCTATGCGTTCCTCTCCGCCCTGATCGGGCAGGAGGCCGAGCGCATACCCGACCCGA CCGGACGGCTGGCCCATGATGCCGGCGTGCGCGACATGCGCATGCTGCTGCTGCGATTCGCCCTGGCGCTGGACCCGGGT TTCGGCCAGGCGCGGCTGCTGCTGTCCGCGCTGCAGTATGACGGCGGCCAGGCGGCGGCGGCCCGCGATACTATCGTGGC GCAGGCGCGTGATGGTGGCGTGGCGCGGGCATTTCCCCACGACCCGCTGGCGACGGTCATGCAGGTGCAGGTCGCGCGCC TGGACGCCGCGACGGGCCGGGGGGACGATGCGATCCGCATCCTGACCGACCTGGCCCGCGCGCAGCCTGCGCAGGCGCAG ATCTGGCAGACGCTGGGCGACATCCAGTCCGGGCGCGAGGACTGGGCCGGGGCCGCCGCGTCCTTCAGCCGGGCGATCAC GGCCACGGGCCGGCTGTCGGGCGACGACTGGGAAATCCTGTTCGGCCGTGCCGTCGCCTATGACCGGCTGGCCCGCTGGC CGCAGGCCCAGGCCGACCTGGAACACGCGCTGGCCCTCGCGCCCAACGAGGCGCTGCTTCTGAACTATCTGGGCTATTCC TGGGTCGAGCATGACCGGAACCTGCCGCAGGCCGAAGCCCTGCTGCGGCACGCCGTCGCGGTCGAGCCGCAGAACGCGGC GATTCGCGACAGCCTGGGCTGGGCGCTGGTGCGCCAGGGCCGCATCGCCGAAGGGCTGGCCCTGCTGGAACGCGCGGCGG AACAGACGCCGGAGGACCCGGCCGTCAATTACCATCTGGGCGTGGCCTACTGGAAAGCCGGCCGCCCGCGTGAGGCCGTC AATCAATGGCATGTCGCGCAGGCCCTGCCCGCCGCCGATCCGTCGGACGTGCAAAAGATCACTGCCGCCCTTGCGGACGC CGCCCGATCGGGCCACGAAGACCCGCCGCCCGACCAGGACGGGGCGGCCCGGAAGAAGGACCCATCCGACCGTGACTGA
Upstream 100 bases:
>100_bases CCGGTCGGGGCGGCCTCTTGCATGCGGGTGGTCGCCGGGCGGCCAAGCGCCATCCGACAGGGTTTGGCAGTTTACCCGAC GCGGGGTAGGGTCCGCCATC
Downstream 100 bases:
>100_bases TCCGACAGGGACTGGAACGCTGCACGAATCCGCCCATGCGAAAATCAACCTCTACCTGCATGTAACGGGGCGCCGGCCGG ACGGATATCACCTGCTGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 612; Mature: 612
Protein sequence:
>612_residues MQRFHLVCTAALAIVAPLAAVPAGAWAAAPAPSMQPPAVTVAAAPWPDGLSGSMLVATVAALEGDDAVAASAFRQAYGLD PSRSVLLRQAFLYSALAGDDAAAGLAARLPGQLMAELVMGNDAVRAGRWSDAQAHYDRVQQDAMLAAIRPLLDAWTLMGA GQPDRALAIIDPWTADRVLGRYYAVHAALIADLAGQHDRADRYYRLALDASPGRDLFSTWALGHWLIAQGHRDQATRLLD SLVAGGAGLSLARDGVLAAMDRPPVTSPRQGIAQAYAFLSALIGQEAERIPDPTGRLAHDAGVRDMRMLLLRFALALDPG FGQARLLLSALQYDGGQAAAARDTIVAQARDGGVARAFPHDPLATVMQVQVARLDAATGRGDDAIRILTDLARAQPAQAQ IWQTLGDIQSGREDWAGAAASFSRAITATGRLSGDDWEILFGRAVAYDRLARWPQAQADLEHALALAPNEALLLNYLGYS WVEHDRNLPQAEALLRHAVAVEPQNAAIRDSLGWALVRQGRIAEGLALLERAAEQTPEDPAVNYHLGVAYWKAGRPREAV NQWHVAQALPAADPSDVQKITAALADAARSGHEDPPPDQDGAARKKDPSDRD
Sequences:
>Translated_612_residues MQRFHLVCTAALAIVAPLAAVPAGAWAAAPAPSMQPPAVTVAAAPWPDGLSGSMLVATVAALEGDDAVAASAFRQAYGLD PSRSVLLRQAFLYSALAGDDAAAGLAARLPGQLMAELVMGNDAVRAGRWSDAQAHYDRVQQDAMLAAIRPLLDAWTLMGA GQPDRALAIIDPWTADRVLGRYYAVHAALIADLAGQHDRADRYYRLALDASPGRDLFSTWALGHWLIAQGHRDQATRLLD SLVAGGAGLSLARDGVLAAMDRPPVTSPRQGIAQAYAFLSALIGQEAERIPDPTGRLAHDAGVRDMRMLLLRFALALDPG FGQARLLLSALQYDGGQAAAARDTIVAQARDGGVARAFPHDPLATVMQVQVARLDAATGRGDDAIRILTDLARAQPAQAQ IWQTLGDIQSGREDWAGAAASFSRAITATGRLSGDDWEILFGRAVAYDRLARWPQAQADLEHALALAPNEALLLNYLGYS WVEHDRNLPQAEALLRHAVAVEPQNAAIRDSLGWALVRQGRIAEGLALLERAAEQTPEDPAVNYHLGVAYWKAGRPREAV NQWHVAQALPAADPSDVQKITAALADAARSGHEDPPPDQDGAARKKDPSDRD >Mature_612_residues MQRFHLVCTAALAIVAPLAAVPAGAWAAAPAPSMQPPAVTVAAAPWPDGLSGSMLVATVAALEGDDAVAASAFRQAYGLD PSRSVLLRQAFLYSALAGDDAAAGLAARLPGQLMAELVMGNDAVRAGRWSDAQAHYDRVQQDAMLAAIRPLLDAWTLMGA GQPDRALAIIDPWTADRVLGRYYAVHAALIADLAGQHDRADRYYRLALDASPGRDLFSTWALGHWLIAQGHRDQATRLLD SLVAGGAGLSLARDGVLAAMDRPPVTSPRQGIAQAYAFLSALIGQEAERIPDPTGRLAHDAGVRDMRMLLLRFALALDPG FGQARLLLSALQYDGGQAAAARDTIVAQARDGGVARAFPHDPLATVMQVQVARLDAATGRGDDAIRILTDLARAQPAQAQ IWQTLGDIQSGREDWAGAAASFSRAITATGRLSGDDWEILFGRAVAYDRLARWPQAQADLEHALALAPNEALLLNYLGYS WVEHDRNLPQAEALLRHAVAVEPQNAAIRDSLGWALVRQGRIAEGLALLERAAEQTPEDPAVNYHLGVAYWKAGRPREAV NQWHVAQALPAADPSDVQKITAALADAARSGHEDPPPDQDGAARKKDPSDRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011717 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR013105 - InterPro: IPR019734 [H]
Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]
EC number: NA
Molecular weight: Translated: 65115; Mature: 65115
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRFHLVCTAALAIVAPLAAVPAGAWAAAPAPSMQPPAVTVAAAPWPDGLSGSMLVATVA CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHH ALEGDDAVAASAFRQAYGLDPSRSVLLRQAFLYSALAGDDAAAGLAARLPGQLMAELVMG HHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHC NDAVRAGRWSDAQAHYDRVQQDAMLAAIRPLLDAWTLMGAGQPDRALAIIDPWTADRVLG CCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHH RYYAVHAALIADLAGQHDRADRYYRLALDASPGRDLFSTWALGHWLIAQGHRDQATRLLD HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH SLVAGGAGLSLARDGVLAAMDRPPVTSPRQGIAQAYAFLSALIGQEAERIPDPTGRLAHD HHHCCCCCCHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHH AGVRDMRMLLLRFALALDPGFGQARLLLSALQYDGGQAAAARDTIVAQARDGGVARAFPH CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHEECCCCCEECCCCC DPLATVMQVQVARLDAATGRGDDAIRILTDLARAQPAQAQIWQTLGDIQSGREDWAGAAA CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHH SFSRAITATGRLSGDDWEILFGRAVAYDRLARWPQAQADLEHALALAPNEALLLNYLGYS HHHHHHEECCCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHH WVEHDRNLPQAEALLRHAVAVEPQNAAIRDSLGWALVRQGRIAEGLALLERAAEQTPEDP HHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC AVNYHLGVAYWKAGRPREAVNQWHVAQALPAADPSDVQKITAALADAARSGHEDPPPDQD CCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC GAARKKDPSDRD CCCCCCCCCCCC >Mature Secondary Structure MQRFHLVCTAALAIVAPLAAVPAGAWAAAPAPSMQPPAVTVAAAPWPDGLSGSMLVATVA CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHH ALEGDDAVAASAFRQAYGLDPSRSVLLRQAFLYSALAGDDAAAGLAARLPGQLMAELVMG HHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHC NDAVRAGRWSDAQAHYDRVQQDAMLAAIRPLLDAWTLMGAGQPDRALAIIDPWTADRVLG CCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHH RYYAVHAALIADLAGQHDRADRYYRLALDASPGRDLFSTWALGHWLIAQGHRDQATRLLD HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH SLVAGGAGLSLARDGVLAAMDRPPVTSPRQGIAQAYAFLSALIGQEAERIPDPTGRLAHD HHHCCCCCCHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHH AGVRDMRMLLLRFALALDPGFGQARLLLSALQYDGGQAAAARDTIVAQARDGGVARAFPH CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHEECCCCCEECCCCC DPLATVMQVQVARLDAATGRGDDAIRILTDLARAQPAQAQIWQTLGDIQSGREDWAGAAA CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHH SFSRAITATGRLSGDDWEILFGRAVAYDRLARWPQAQADLEHALALAPNEALLLNYLGYS HHHHHHEECCCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHH WVEHDRNLPQAEALLRHAVAVEPQNAAIRDSLGWALVRQGRIAEGLALLERAAEQTPEDP HHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC AVNYHLGVAYWKAGRPREAVNQWHVAQALPAADPSDVQKITAALADAARSGHEDPPPDQD CCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC GAARKKDPSDRD CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7883699; 10984043 [H]