Click here to switch to the map view.

The map label for this gene is 162146545

Identifier: 162146545

GI number: 162146545

Start: 739452

End: 740630

Strand: Direct

Name: 162146545

Synonym: GDI_0722

Alternate gene names: NA

Gene position: 739452-740630 (Clockwise)

Preceding gene: 162146540

Following gene: 162146546

Centisome position: 18.75

GC content: 63.7

Gene sequence:

>1179_bases
ATGGCCGTTCCTATTATGCAGGCTGTCAGGGTGGGTGCTTACGTCGTGAAGCAGCACGTGACCGGCCGGAAACGTTACCC
GCTTGTCCTGATGCTCGAACCGCTGTTCAGGTGCAACCTGGCCTGCGCGGGGTGCGGCAAGATCGATTACCCGGCGCAGA
TCCTGAACCAGCGCATGAGCGTGCAGGAATGCCTGGACGCGGATACCGAGGCCGGTGCCCCCGTCATCGCGATCGCGGGT
GGCGAGCCCCTGCTGCACAAGGAAATGCCGGACATCGTCCGGGGCCTGATCGCGCGCAAGAAATACGTCTATCTCTGCAC
CAATGCCCTTCTGCTCGAAAAGAAGATGGACGATTACGAGCCGTCGCCCTTCTTCTCGTGGGACGTGCATCTGGATGGCG
ACCAGGCGATGCATGATGCCTCGGTCTGCCAGGACGGCGTGTACGAACGCGCCGTGGCCGCGATCAAGAAGGCCAAGGCC
CGCGGCTTCCGCCTGTCGATCAACTGCACGGTGTTCGACGGGACCGACCCCAAGCGCCTGGCCGCCTTCTTCGACGAAGT
CATGGCCATGGGCGTGGACGGCATCATGACCGCCCCGGGTTATGCCTACGAGCGCGCGCCGGACCAGGCCCACTTCCTGA
ATCGCCAGAAGACGAAGCAGCTTTTCCGCGACGTCTTCCGCCTGGGCAAGGGCAAGAAGTGGCGCTTCACGCAGTCGCCG
CTGTTCCTGAACTTCCTTGCGGGGAACGAGGAATATCATTGCACCCCGTGGGGCAAGCCGCTGCGCAACGTCTTCGGCTG
GCAGCGTCCGTGCTACCTGCTGGGCGAAGGCTACGCCAAGACGTTCCAGGAACTGATGGACGACACCAAGTGGGATGATT
ACGGCACCGGCAATTACGAAAAATGCGCCGACTGCATGGTCCATTCCGGGTATGAATCCACCGCCGTGATGGACGCCGTG
CGCCGCCCCTGGCACATCGCCAAGGTCGCCCTGTTCGGGCCCGAGACCGAAAAGCCGATGGTTCCTGAAATCTCGCTGGC
CAACCAGCGTCCGGCCGAATACGTCTACACCCAGCATGTCGATGCCCGCATGGCCGAACTGGCCGCGGCGAAGAAGCCGG
CCAAGCCGCCGCGCGTCACCGTCGTGGACGCGCCGGCCGTCGAGACCGCCGCCGACTGA

Upstream 100 bases:

>100_bases
GACGGCCCCGGGGTTGTTATCCTTCGTACGAACGTGTCCATAATAAGGTCACATGATTTGAAGAGGGCCGGCATATCGCC
GGCGCAGGAGCAGAGGTTTC

Downstream 100 bases:

>100_bases
GCGGTGCGCGACGGACGCGATCTGAAGTGGCGGGGCTTGTCCCCGCCATTTTCATATTCATCGCGTCTTTTTTGCCACAG
TTCGGATTGCTTCCGCCGAT

Product: Fe-S oxidoreductase

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Radical SAM Family Protein; Radical SAM Domain Protein; Molybdenum Cofactor Biosynthesis Protein A; MoaA/NifB/PqqE Family Protein; MoaA NifB PqqE Radical SAM Superfamily Protein; Radical S-Adenosylmethionine Superfamily Protein; Iron-Sulfur Oxidoreductase; MoaA/NifB/PqqE Family Fe-S Oxidoreductase; Radical SAM Oxidoreductase; Heme D1 Biosynthesis Protein; Hopanoid Biosynthesis Associated Radical SAM Protein; Fe-S Oxidoreductase; Radical SAM Protein; Radical SAM Superfamily; Radical SAM; Radical SAM Family Fe-S Protein

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MAVPIMQAVRVGAYVVKQHVTGRKRYPLVLMLEPLFRCNLACAGCGKIDYPAQILNQRMSVQECLDADTEAGAPVIAIAG
GEPLLHKEMPDIVRGLIARKKYVYLCTNALLLEKKMDDYEPSPFFSWDVHLDGDQAMHDASVCQDGVYERAVAAIKKAKA
RGFRLSINCTVFDGTDPKRLAAFFDEVMAMGVDGIMTAPGYAYERAPDQAHFLNRQKTKQLFRDVFRLGKGKKWRFTQSP
LFLNFLAGNEEYHCTPWGKPLRNVFGWQRPCYLLGEGYAKTFQELMDDTKWDDYGTGNYEKCADCMVHSGYESTAVMDAV
RRPWHIAKVALFGPETEKPMVPEISLANQRPAEYVYTQHVDARMAELAAAKKPAKPPRVTVVDAPAVETAAD

Sequences:

>Translated_392_residues
MAVPIMQAVRVGAYVVKQHVTGRKRYPLVLMLEPLFRCNLACAGCGKIDYPAQILNQRMSVQECLDADTEAGAPVIAIAG
GEPLLHKEMPDIVRGLIARKKYVYLCTNALLLEKKMDDYEPSPFFSWDVHLDGDQAMHDASVCQDGVYERAVAAIKKAKA
RGFRLSINCTVFDGTDPKRLAAFFDEVMAMGVDGIMTAPGYAYERAPDQAHFLNRQKTKQLFRDVFRLGKGKKWRFTQSP
LFLNFLAGNEEYHCTPWGKPLRNVFGWQRPCYLLGEGYAKTFQELMDDTKWDDYGTGNYEKCADCMVHSGYESTAVMDAV
RRPWHIAKVALFGPETEKPMVPEISLANQRPAEYVYTQHVDARMAELAAAKKPAKPPRVTVVDAPAVETAAD
>Mature_391_residues
AVPIMQAVRVGAYVVKQHVTGRKRYPLVLMLEPLFRCNLACAGCGKIDYPAQILNQRMSVQECLDADTEAGAPVIAIAGG
EPLLHKEMPDIVRGLIARKKYVYLCTNALLLEKKMDDYEPSPFFSWDVHLDGDQAMHDASVCQDGVYERAVAAIKKAKAR
GFRLSINCTVFDGTDPKRLAAFFDEVMAMGVDGIMTAPGYAYERAPDQAHFLNRQKTKQLFRDVFRLGKGKKWRFTQSPL
FLNFLAGNEEYHCTPWGKPLRNVFGWQRPCYLLGEGYAKTFQELMDDTKWDDYGTGNYEKCADCMVHSGYESTAVMDAVR
RPWHIAKVALFGPETEKPMVPEISLANQRPAEYVYTQHVDARMAELAAAKKPAKPPRVTVVDAPAVETAAD

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43931; Mature: 43800

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPIMQAVRVGAYVVKQHVTGRKRYPLVLMLEPLFRCNLACAGCGKIDYPAQILNQRMS
CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCCEECCCCCCCCCHHHHHHHHH
VQECLDADTEAGAPVIAIAGGEPLLHKEMPDIVRGLIARKKYVYLCTNALLLEKKMDDYE
HHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCCCC
PSPFFSWDVHLDGDQAMHDASVCQDGVYERAVAAIKKAKARGFRLSINCTVFDGTDPKRL
CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHH
AAFFDEVMAMGVDGIMTAPGYAYERAPDQAHFLNRQKTKQLFRDVFRLGKGKKWRFTQSP
HHHHHHHHHHCCCCEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
LFLNFLAGNEEYHCTPWGKPLRNVFGWQRPCYLLGEGYAKTFQELMDDTKWDDYGTGNYE
EEEEEEECCCCEEECCCCHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCHH
KCADCMVHSGYESTAVMDAVRRPWHIAKVALFGPETEKPMVPEISLANQRPAEYVYTQHV
HHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
DARMAELAAAKKPAKPPRVTVVDAPAVETAAD
HHHHHHHHHHCCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure 
AVPIMQAVRVGAYVVKQHVTGRKRYPLVLMLEPLFRCNLACAGCGKIDYPAQILNQRMS
CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCCEECCCCCCCCCHHHHHHHHH
VQECLDADTEAGAPVIAIAGGEPLLHKEMPDIVRGLIARKKYVYLCTNALLLEKKMDDYE
HHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCCCC
PSPFFSWDVHLDGDQAMHDASVCQDGVYERAVAAIKKAKARGFRLSINCTVFDGTDPKRL
CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHH
AAFFDEVMAMGVDGIMTAPGYAYERAPDQAHFLNRQKTKQLFRDVFRLGKGKKWRFTQSP
HHHHHHHHHHCCCCEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
LFLNFLAGNEEYHCTPWGKPLRNVFGWQRPCYLLGEGYAKTFQELMDDTKWDDYGTGNYE
EEEEEEECCCCEEECCCCHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCHH
KCADCMVHSGYESTAVMDAVRRPWHIAKVALFGPETEKPMVPEISLANQRPAEYVYTQHV
HHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
DARMAELAAAKKPAKPPRVTVVDAPAVETAAD
HHHHHHHHHHCCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA