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The map label for this gene is ybbF [C]

Identifier: 162146493

GI number: 162146493

Start: 677075

End: 677902

Strand: Direct

Name: ybbF [C]

Synonym: GDI_0669

Alternate gene names: 162146493

Gene position: 677075-677902 (Clockwise)

Preceding gene: 162146486

Following gene: 162146494

Centisome position: 17.17

GC content: 64.13

Gene sequence:

>828_bases
ATGAACGTGATTCTGAACGACCGACCCGCCTCCGCCAGCTATCGGGCCGTCTTCCTTTCGGACGTTCATCTGGGCACGCG
CGACTGCCGCGCGGACCTGCTGGCGGAATTCCTGCGCAACGTGACATGCCAGCGTCTCTATCTGGTCGGTGACATCATCG
ACGGATGGAAGCTCAAGCGGTCCTGGTTCTGGAACGCCCATCACGACGACGTCGTGAACCTGATCCTGCGCATGGGCCGC
ACGGGGACCGAGATTTTCTATATCCCGGGCAATCATGACGAAATTTTCCGCCGCCTGCTGCCTCACAGGCTGGAAGTCGC
GGGCATCAGGCTGTGCGGGCAGGTCGAGCACGTGACCGCTTCGGGCAAGAGGTTCCTCGTCCTGCATGGGGATGAATTCG
ACAGCGTGGTCCGCTATGCCCCGTTCCTGGCGATGCTGGGCGACCGGGCCTATACCGTGGCGCTGGTCGTCAATCGCTGG
TTCAACCAGGTGCGCCGCCGCCTGGGCCTGCCCTATCGGTCGCTGTCGCAATGGCTGAAGCGGCAGGTGAAGGGCGCCTT
GATGGCCATCGACCGGTTCGAGACCGCCGTGGCGGACGAGGCCCGGCGGCGCGGGGTGGACGGCGTGATCTGCGGCCACA
TCCATCATGCCGTCATCAAGGATCTGGACGGGATACTCTACATGAATGACGGCGACTGGGTCGAAAGCTGCAGCGCCCTG
GTGGAACATCATGACGGCAGCATGGAATTGCTGGACATGACCGATGTCCGCCGCCGGACCGGGGCGCCGTCGCGCCTGGC
CTCGTTCCTGTTCCCGGCCGGTGCCTGA

Upstream 100 bases:

>100_bases
CAGGTGATGTCCCGCGTCGGGATTTCACGAAAGATACATAAAAGAAACGGGGGGATGCGGCTAGAAGGGGCCCGTCTCTC
ATCAGGGTGTGCTGTTCGCG

Downstream 100 bases:

>100_bases
ATGACGGCGCAGCTTGCGGTTCTCGACACGGCACCGCGCGTCACGGTGGCTCCGCGTGCCTTGCGCATCCTGATCGTCAG
CGATGCCTGGTATCCCCAGG

Product: UDP-2,3-diacylglucosamine hydrolase

Products: 2,3-bis(3-hydroxymyristoyl)-beta-D-glucosaminyl 1; UMP [C]

Alternate protein names: Ser/Thr Protein Phosphatase Family Protein; Calcineurin-Like Phosphoesterase; UDP-2 3-Diacylglucosamine Hydrolase; Metallo-Phosphoesterase; Metallo-Phosphoesterase Protein; Phosphoesterase; Metallophosphoesterase Family Protein; Calcineurin Phosphohydrolase Superfamily Protein; Calcineurin-Like Phosphoesterase Family; Metallo-Dependent Phosphoesterase; Metallophosphoesterase Protein

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MNVILNDRPASASYRAVFLSDVHLGTRDCRADLLAEFLRNVTCQRLYLVGDIIDGWKLKRSWFWNAHHDDVVNLILRMGR
TGTEIFYIPGNHDEIFRRLLPHRLEVAGIRLCGQVEHVTASGKRFLVLHGDEFDSVVRYAPFLAMLGDRAYTVALVVNRW
FNQVRRRLGLPYRSLSQWLKRQVKGALMAIDRFETAVADEARRRGVDGVICGHIHHAVIKDLDGILYMNDGDWVESCSAL
VEHHDGSMELLDMTDVRRRTGAPSRLASFLFPAGA

Sequences:

>Translated_275_residues
MNVILNDRPASASYRAVFLSDVHLGTRDCRADLLAEFLRNVTCQRLYLVGDIIDGWKLKRSWFWNAHHDDVVNLILRMGR
TGTEIFYIPGNHDEIFRRLLPHRLEVAGIRLCGQVEHVTASGKRFLVLHGDEFDSVVRYAPFLAMLGDRAYTVALVVNRW
FNQVRRRLGLPYRSLSQWLKRQVKGALMAIDRFETAVADEARRRGVDGVICGHIHHAVIKDLDGILYMNDGDWVESCSAL
VEHHDGSMELLDMTDVRRRTGAPSRLASFLFPAGA
>Mature_275_residues
MNVILNDRPASASYRAVFLSDVHLGTRDCRADLLAEFLRNVTCQRLYLVGDIIDGWKLKRSWFWNAHHDDVVNLILRMGR
TGTEIFYIPGNHDEIFRRLLPHRLEVAGIRLCGQVEHVTASGKRFLVLHGDEFDSVVRYAPFLAMLGDRAYTVALVVNRW
FNQVRRRLGLPYRSLSQWLKRQVKGALMAIDRFETAVADEARRRGVDGVICGHIHHAVIKDLDGILYMNDGDWVESCSAL
VEHHDGSMELLDMTDVRRRTGAPSRLASFLFPAGA

Specific function: Lipid A biosynthesis [C]

COG id: COG2908

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31323; Mature: 31323

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVILNDRPASASYRAVFLSDVHLGTRDCRADLLAEFLRNVTCQRLYLVGDIIDGWKLKR
CCEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEH
SWFWNAHHDDVVNLILRMGRTGTEIFYIPGNHDEIFRRLLPHRLEVAGIRLCGQVEHVTA
HEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCHHHHHHHHHHHHCCHHEEEC
SGKRFLVLHGDEFDSVVRYAPFLAMLGDRAYTVALVVNRWFNQVRRRLGLPYRSLSQWLK
CCCEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RQVKGALMAIDRFETAVADEARRRGVDGVICGHIHHAVIKDLDGILYMNDGDWVESCSAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCEEEECCCCHHHHHHHH
VEHHDGSMELLDMTDVRRRTGAPSRLASFLFPAGA
HHHCCCCEEEECHHHHHHHCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MNVILNDRPASASYRAVFLSDVHLGTRDCRADLLAEFLRNVTCQRLYLVGDIIDGWKLKR
CCEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEH
SWFWNAHHDDVVNLILRMGRTGTEIFYIPGNHDEIFRRLLPHRLEVAGIRLCGQVEHVTA
HEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCHHHHHHHHHHHHCCHHEEEC
SGKRFLVLHGDEFDSVVRYAPFLAMLGDRAYTVALVVNRWFNQVRRRLGLPYRSLSQWLK
CCCEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RQVKGALMAIDRFETAVADEARRRGVDGVICGHIHHAVIKDLDGILYMNDGDWVESCSAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCEEEECCCCHHHHHHHH
VEHHDGSMELLDMTDVRRRTGAPSRLASFLFPAGA
HHHCCCCEEEECHHHHHHHCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; UDP-2,3-bis(3-hydroxymyristoyl)glucosamine [C]

Specific reaction: H2O + UDP-2,3-bis(3-hydroxymyristoyl)glucosamine = 2,3-bis(3-hydroxymyristoyl)-beta-D-glucosaminyl 1 + UMP [C]

General reaction: Lipid A biosynthesis [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA