| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is 162146482
Identifier: 162146482
GI number: 162146482
Start: 665989
End: 667878
Strand: Direct
Name: 162146482
Synonym: GDI_0658
Alternate gene names: NA
Gene position: 665989-667878 (Clockwise)
Preceding gene: 162146480
Following gene: 162146484
Centisome position: 16.89
GC content: 63.23
Gene sequence:
>1890_bases ATGGCGGATATCGTTTATCGTAATGGCATTCTTTTCGATGGATCCGGAGGTGCTCCCCTGATTTCCGACGTGGCCGTAAC CGGTGACAGGATCACCGCGATCGGGCCAGGCCTGGCGACGGACGAAGGGACGACCGAGATTGACTGTCGGGGTCTATGGC TGATGCCGGGGCTGCTCGACATCCACACGCATCTCGACCTGGAGGTCGAACTGTCCCCCGAACTCCCCGAAGTGGTGCGC CATGGTACCACGACGGTCGTGATGGGCAACTGCTCCATCGGGGTGATATACGGCCATCAGCGGCGCGACGGCGAGGACCC GATCGTGGATTGCTTCGCGCGCGTCGAGAACATGCCGAAAACCGTTCTGGGCCGGGTTGCGGATACCTGCACATGGACAG ATTCGGCGGGTTATCTCGATCATCTGGAAAGCCTTCCGCTCGGCCCCAATGTGGTGCCGTTGATCCCGCATTCCATGCTT CGGATCGAAGTCATGGGACTGAACCAGTCCGTGGGCCGTCGGCCCACCCGGCAGGAACTTTCCCGCATGGAGCGGCTGCT GGACCTGGGAATGTCCCAGGGCTATGCGGGATTTTCGACCGACGCGCTGCCGTTCCATTTCCTTGCCAACGCGCCGAACA AGAAGAAAAAGATCCCGACGCAATATGCCGGGTTCAAGGAATTGTCCCGGCTTACGTCGGTCGTGCGCCGCTATGGCCGG GTCTGGCAGGCGACACCGTCCAAGGACAATATCCCGGCTGTCGTGCGCAGTTTCCTGCTGACCAGCGGGCGTCTTTACGG CCGGCCGCTCAAGACGACCGTGCTGGCGGCGCTTGACCTGCGGACCAACCGGTCGGCCGTGTCGCTCTGCCTGCTCCTGT CCGCGATCCTGAATTCCAGGCTGCTGGGCGGGGTATTCCGTTTTCAGGCCCTGTCGTCGTCCTTCCGGATCTGGAGTGAC GGCGCCATCAACCCGATCGCGGACGAGATTCCGGAATTGAGGGCCCTCAACGAGCTGGAACTCGCCGACCGCCAGGGCCG TGCCCGTATCCTGAACGATCCCGCCTGGATCGAAGCGTTCCGGAAGATGTGGGTGAAGGGAAAAAAGGGCTGGTCGCTGG CCCGGCTGATGCGGCGGCTCCGTCTGGAGGACGTCGTCCTGACCCGGCGGCTGGAAGACATGGTCGTGGCCGAATGCCCG CTTCCCCACTGGGCCGGCGAAACCTTGGCGGCCCCCTGTCGCAGGCTTCGAACCGCCCAGGCATCCAAGGGTCGACGGGG GGCGGCCAATGACGCCGAGGCGGCATTCTTCGCGGGATTTCCAGATCCGATCCAGGATGACGCGGACTTCCTTCTGCATC TTCTGCGGGAATGGGATACGGATTTGCGGTGGGAAACGACCATCGCCAATCGCGATGAAGCGACGGTCAGGAAACTCCTG TTCCACGACCAGACGCTGCCCGGTTTCAACGACAGCGGCGCGCACCTGGCCAATATCGCGTTCTATGACGGCAACCTGCG GACGCTGAAAATGGCGCAGCGGGAGGGGTTGCAGCGGGTTTCCCTGGCCGTCCATCGGCTGACCGGGCTTCCGGCGGAAT TCTTCGGGATCAAGGCGGGGCGGGTGCGTGTGGGCGCACAGGCGGATCTCTGCGTCGTCGATCCCGTGGCGCTCCAAAAA TGGAATCCGGAAAGCACCTATCACTTCATCGACCGTCGGCAGTTCGGATGCAGGCAGGTCGTCAATCGCCCGCAGGGTGT GGTGCGGAACGTGATGATCGCCGGCAGGATGGCCTGGGCGGATGACCGATATGCGCCCGAGTTCGGCCAGCATGCGTACG GGCGCGTCGTAAGGGCGAAGGACCATGCGCGGGAGTGCGATCCCGTGTGA
Upstream 100 bases:
>100_bases TCCCGGGTTGTTATAATCAGGCAGGCAGGGCGACAGAGCAGCGATCACATCTGCGATATGCTCGTTATTTTTTATCCGTC GTCCGCTCTCGGAGACAAAT
Downstream 100 bases:
>100_bases CTCAACCTACCGGGTTCGGCGTTCCCGGCGGCTCCTGGCCGATAAGCTTCAGCAGGGCCTCGGCGGCCGGGCTGCGATAG CGCTCCTTATGTCGCAACCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 629; Mature: 628
Protein sequence:
>629_residues MADIVYRNGILFDGSGGAPLISDVAVTGDRITAIGPGLATDEGTTEIDCRGLWLMPGLLDIHTHLDLEVELSPELPEVVR HGTTTVVMGNCSIGVIYGHQRRDGEDPIVDCFARVENMPKTVLGRVADTCTWTDSAGYLDHLESLPLGPNVVPLIPHSML RIEVMGLNQSVGRRPTRQELSRMERLLDLGMSQGYAGFSTDALPFHFLANAPNKKKKIPTQYAGFKELSRLTSVVRRYGR VWQATPSKDNIPAVVRSFLLTSGRLYGRPLKTTVLAALDLRTNRSAVSLCLLLSAILNSRLLGGVFRFQALSSSFRIWSD GAINPIADEIPELRALNELELADRQGRARILNDPAWIEAFRKMWVKGKKGWSLARLMRRLRLEDVVLTRRLEDMVVAECP LPHWAGETLAAPCRRLRTAQASKGRRGAANDAEAAFFAGFPDPIQDDADFLLHLLREWDTDLRWETTIANRDEATVRKLL FHDQTLPGFNDSGAHLANIAFYDGNLRTLKMAQREGLQRVSLAVHRLTGLPAEFFGIKAGRVRVGAQADLCVVDPVALQK WNPESTYHFIDRRQFGCRQVVNRPQGVVRNVMIAGRMAWADDRYAPEFGQHAYGRVVRAKDHARECDPV
Sequences:
>Translated_629_residues MADIVYRNGILFDGSGGAPLISDVAVTGDRITAIGPGLATDEGTTEIDCRGLWLMPGLLDIHTHLDLEVELSPELPEVVR HGTTTVVMGNCSIGVIYGHQRRDGEDPIVDCFARVENMPKTVLGRVADTCTWTDSAGYLDHLESLPLGPNVVPLIPHSML RIEVMGLNQSVGRRPTRQELSRMERLLDLGMSQGYAGFSTDALPFHFLANAPNKKKKIPTQYAGFKELSRLTSVVRRYGR VWQATPSKDNIPAVVRSFLLTSGRLYGRPLKTTVLAALDLRTNRSAVSLCLLLSAILNSRLLGGVFRFQALSSSFRIWSD GAINPIADEIPELRALNELELADRQGRARILNDPAWIEAFRKMWVKGKKGWSLARLMRRLRLEDVVLTRRLEDMVVAECP LPHWAGETLAAPCRRLRTAQASKGRRGAANDAEAAFFAGFPDPIQDDADFLLHLLREWDTDLRWETTIANRDEATVRKLL FHDQTLPGFNDSGAHLANIAFYDGNLRTLKMAQREGLQRVSLAVHRLTGLPAEFFGIKAGRVRVGAQADLCVVDPVALQK WNPESTYHFIDRRQFGCRQVVNRPQGVVRNVMIAGRMAWADDRYAPEFGQHAYGRVVRAKDHARECDPV >Mature_628_residues ADIVYRNGILFDGSGGAPLISDVAVTGDRITAIGPGLATDEGTTEIDCRGLWLMPGLLDIHTHLDLEVELSPELPEVVRH GTTTVVMGNCSIGVIYGHQRRDGEDPIVDCFARVENMPKTVLGRVADTCTWTDSAGYLDHLESLPLGPNVVPLIPHSMLR IEVMGLNQSVGRRPTRQELSRMERLLDLGMSQGYAGFSTDALPFHFLANAPNKKKKIPTQYAGFKELSRLTSVVRRYGRV WQATPSKDNIPAVVRSFLLTSGRLYGRPLKTTVLAALDLRTNRSAVSLCLLLSAILNSRLLGGVFRFQALSSSFRIWSDG AINPIADEIPELRALNELELADRQGRARILNDPAWIEAFRKMWVKGKKGWSLARLMRRLRLEDVVLTRRLEDMVVAECPL PHWAGETLAAPCRRLRTAQASKGRRGAANDAEAAFFAGFPDPIQDDADFLLHLLREWDTDLRWETTIANRDEATVRKLLF HDQTLPGFNDSGAHLANIAFYDGNLRTLKMAQREGLQRVSLAVHRLTGLPAEFFGIKAGRVRVGAQADLCVVDPVALQKW NPESTYHFIDRRQFGCRQVVNRPQGVVRNVMIAGRMAWADDRYAPEFGQHAYGRVVRAKDHARECDPV
Specific function: Unknown
COG id: COG3653
COG function: function code Q; N-acyl-D-aspartate/D-glutamate deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013108 - InterPro: IPR011059 [H]
Pfam domain/function: PF07969 Amidohydro_3 [H]
EC number: NA
Molecular weight: Translated: 70076; Mature: 69945
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIVYRNGILFDGSGGAPLISDVAVTGDRITAIGPGLATDEGTTEIDCRGLWLMPGLLD CCCEEEECCEEEECCCCCCHHHHHEECCCEEEEECCCCCCCCCCCEECCCEEEECCCHHH IHTHLDLEVELSPELPEVVRHGTTTVVMGNCSIGVIYGHQRRDGEDPIVDCFARVENMPK HHHCEEEEEEECCCHHHHHHCCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHCCCH TVLGRVADTCTWTDSAGYLDHLESLPLGPNVVPLIPHSMLRIEVMGLNQSVGRRPTRQEL HHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEECCCCCCEEEEEEEECCHHHCCCCCHHHH SRMERLLDLGMSQGYAGFSTDALPFHFLANAPNKKKKIPTQYAGFKELSRLTSVVRRYGR HHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHH VWQATPSKDNIPAVVRSFLLTSGRLYGRPLKTTVLAALDLRTNRSAVSLCLLLSAILNSR HEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LLGGVFRFQALSSSFRIWSDGAINPIADEIPELRALNELELADRQGRARILNDPAWIEAF HHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCHHHHHCCCCCCEECCCHHHHHHH RKMWVKGKKGWSLARLMRRLRLEDVVLTRRLEDMVVAECPLPHWAGETLAAPCRRLRTAQ HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH ASKGRRGAANDAEAAFFAGFPDPIQDDADFLLHLLREWDTDLRWETTIANRDEATVRKLL HCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH FHDQTLPGFNDSGAHLANIAFYDGNLRTLKMAQREGLQRVSLAVHRLTGLPAEFFGIKAG HHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCCCCC RVRVGAQADLCVVDPVALQKWNPESTYHFIDRRQFGCRQVVNRPQGVVRNVMIAGRMAWA CEEECCCCCEEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEECC DDRYAPEFGQHAYGRVVRAKDHARECDPV CCCCCCHHCCHHHHHEECCHHHCCCCCCC >Mature Secondary Structure ADIVYRNGILFDGSGGAPLISDVAVTGDRITAIGPGLATDEGTTEIDCRGLWLMPGLLD CCEEEECCEEEECCCCCCHHHHHEECCCEEEEECCCCCCCCCCCEECCCEEEECCCHHH IHTHLDLEVELSPELPEVVRHGTTTVVMGNCSIGVIYGHQRRDGEDPIVDCFARVENMPK HHHCEEEEEEECCCHHHHHHCCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHCCCH TVLGRVADTCTWTDSAGYLDHLESLPLGPNVVPLIPHSMLRIEVMGLNQSVGRRPTRQEL HHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEECCCCCCEEEEEEEECCHHHCCCCCHHHH SRMERLLDLGMSQGYAGFSTDALPFHFLANAPNKKKKIPTQYAGFKELSRLTSVVRRYGR HHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHH VWQATPSKDNIPAVVRSFLLTSGRLYGRPLKTTVLAALDLRTNRSAVSLCLLLSAILNSR HEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LLGGVFRFQALSSSFRIWSDGAINPIADEIPELRALNELELADRQGRARILNDPAWIEAF HHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCHHHHHCCCCCCEECCCHHHHHHH RKMWVKGKKGWSLARLMRRLRLEDVVLTRRLEDMVVAECPLPHWAGETLAAPCRRLRTAQ HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH ASKGRRGAANDAEAAFFAGFPDPIQDDADFLLHLLREWDTDLRWETTIANRDEATVRKLL HCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH FHDQTLPGFNDSGAHLANIAFYDGNLRTLKMAQREGLQRVSLAVHRLTGLPAEFFGIKAG HHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCCCCC RVRVGAQADLCVVDPVALQKWNPESTYHFIDRRQFGCRQVVNRPQGVVRNVMIAGRMAWA CEEECCCCCEEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEECC DDRYAPEFGQHAYGRVVRAKDHARECDPV CCCCCCHHCCHHHHHEECCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]