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The map label for this gene is yciF [H]

Identifier: 162146460

GI number: 162146460

Start: 646082

End: 646669

Strand: Direct

Name: yciF [H]

Synonym: GDI_0636

Alternate gene names: 162146460

Gene position: 646082-646669 (Clockwise)

Preceding gene: 162146459

Following gene: 162146463

Centisome position: 16.38

GC content: 63.95

Gene sequence:

>588_bases
ATGCCGTGCCAGGACGCCCGACTCCGTCCGCCGGACATGCGCGCGCGGATGGTGTCGGAATCGGAACTGGAGGACACGCC
AATGGGTCTCTTCACTCGCGACATCCAGACCATGCAGGATCTGTTCGTCCATCAACTGAAGGATGTGCTGTACGCCGAAA
AGCGCATCGTGAAGGCCATGCCGGCCCTGATCGACAAGGCGACTTCGCCCGAACTGAAGAACGGGCTGCAGATGCACCTG
GAACAGACCCGCAACCACGTCACGCGCCTGGAGAACGTCTTCAGGATGCAGGACATCGAACCCAGTACCGTCAAATGTCC
CGCGATCGACGGGATCATCGACGAGGCCGAGGAAATTTCGGGCGAAGTCGCGGACAAGGGCGTGCTCGACGCCGCCATCG
CCGCCTCGAGCCAGGCCGTGGAGCATTACGAGATCACCCGCTACGGCACCCTGATCGCCTGGGCCAAGGAACTGGGCCGG
GCCGATTGCGCGTCGATCCTGGGCGAGACGTTGCAGGAGGAACGCCAGGCCGACCAGTCCCTGACCCAACTGGCCGAACA
GCGGCTGAACCACGCCGCCGCGGCCTGA

Upstream 100 bases:

>100_bases
CGACAGGACATGTTAGCGGCTCCGGCGGGCGCCGATATCACGTGTTTGTAACACGACCTTTAAAATCACCCGGGCCGGGC
CGACCTCGCGATCCTGGCAC

Downstream 100 bases:

>100_bases
CGGGTCCGGACCGCCGGTCCGTCGCCCTACGGGGCCGGGCCGGCGGCGGCGCATTCGTCCTCGACTTGGCGCGCGATCGC
GAAGAACCGGTCGCGTACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MPCQDARLRPPDMRARMVSESELEDTPMGLFTRDIQTMQDLFVHQLKDVLYAEKRIVKAMPALIDKATSPELKNGLQMHL
EQTRNHVTRLENVFRMQDIEPSTVKCPAIDGIIDEAEEISGEVADKGVLDAAIAASSQAVEHYEITRYGTLIAWAKELGR
ADCASILGETLQEERQADQSLTQLAEQRLNHAAAA

Sequences:

>Translated_195_residues
MPCQDARLRPPDMRARMVSESELEDTPMGLFTRDIQTMQDLFVHQLKDVLYAEKRIVKAMPALIDKATSPELKNGLQMHL
EQTRNHVTRLENVFRMQDIEPSTVKCPAIDGIIDEAEEISGEVADKGVLDAAIAASSQAVEHYEITRYGTLIAWAKELGR
ADCASILGETLQEERQADQSLTQLAEQRLNHAAAA
>Mature_194_residues
PCQDARLRPPDMRARMVSESELEDTPMGLFTRDIQTMQDLFVHQLKDVLYAEKRIVKAMPALIDKATSPELKNGLQMHLE
QTRNHVTRLENVFRMQDIEPSTVKCPAIDGIIDEAEEISGEVADKGVLDAAIAASSQAVEHYEITRYGTLIAWAKELGRA
DCASILGETLQEERQADQSLTQLAEQRLNHAAAA

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=161, Percent_Identity=36.6459627329193, Blast_Score=113, Evalue=7e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 21757; Mature: 21626

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCQDARLRPPDMRARMVSESELEDTPMGLFTRDIQTMQDLFVHQLKDVLYAEKRIVKAM
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PALIDKATSPELKNGLQMHLEQTRNHVTRLENVFRMQDIEPSTVKCPAIDGIIDEAEEIS
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHH
GEVADKGVLDAAIAASSQAVEHYEITRYGTLIAWAKELGRADCASILGETLQEERQADQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
LTQLAEQRLNHAAAA
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
PCQDARLRPPDMRARMVSESELEDTPMGLFTRDIQTMQDLFVHQLKDVLYAEKRIVKAM
CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PALIDKATSPELKNGLQMHLEQTRNHVTRLENVFRMQDIEPSTVKCPAIDGIIDEAEEIS
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHH
GEVADKGVLDAAIAASSQAVEHYEITRYGTLIAWAKELGRADCASILGETLQEERQADQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
LTQLAEQRLNHAAAA
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]